prot_H-elongata_contig49750.12186.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig49750.12186.1
Unique Name	prot_H-elongata_contig49750.12186.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	141

Homology

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: D7FN62_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN62_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.430e-38
Identity = 76/121 (62.81%), Postives = 89/121 (73.55%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGDGEWLEFNDTVVSPFDVKDMAVECFGGEE 121
            +INDRLEFP+EL+M+P+TKEGR A  AAA+   G  +VG  G      K +     K  ++Y YHLAGVVVHMGTANSGHYYS+IR R  DG GEWLEFNDTVVS FDV+DM  EC+GGEE
Sbjct: 1675 KINDRLEFPIELNMYPYTKEGRAATTAAASKEGGHEEVGTEGADAEVEKEEEPA--KPEEYYHYHLAGVVVHMGTANSGHYYSYIRPR--DGGGEWLEFNDTVVSTFDVEDMEAECYGGEE 1791

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: A0A6H5KLT8_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT8_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 2.630e-38
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGDGEWLEFNDTVVSPFDVKDMAVECFGGEE 121
            +INDRLEFP+EL+M+P+TKEGR A   AA    G  +VG  G      K +     K  ++Y YHLAGVVVHMGTANSGHYYS+IR R  DG GEWLEFNDTVVS FDV+DM  ECFGGEE
Sbjct:  919 KINDRLEFPIELNMYPYTKEGRAATTTAAGKEGGHEEVGTKGAGAEVEKEEEPA--KPEEYYHYHLAGVVVHMGTANSGHYYSYIRPR--DGGGEWLEFNDTVVSTFDVEDMEAECFGGEE 1035

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: I2CRD3_NANGC (Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD3_NANGC)

HSP 1 Score: 126 bits (316), Expect = 6.580e-31
Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAA------VAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGDGEWLEFNDTVVSPFDVKDMAVECFGGEET 122
            +INDRLEFP++LDM+P+T EGR A       +AAA  AE S ++         R+          ++YLY LAGVV+HMGTANSGHYYS+IR R G+  G W EFNDTVV+ F+  D+ VECFGG+ET
Sbjct:  415 KINDRLEFPVDLDMYPYTLEGRTAVRKGGTGIAAAGNAEDSAEL---------RERTQSAAGHPPEYYLYRLAGVVIHMGTANSGHYYSYIRERGGERSG-WFEFNDTVVTDFNPADLEVECFGGQET 532

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.400e-30
Identity = 65/128 (50.78%), Postives = 85/128 (66.41%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAA------VAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGDGEWLEFNDTVVSPFDVKDMAVECFGGEET 122
            +INDRLEFP++LDM+P+T EGR A       ++AA  AE + ++         R+          ++YLY LAGVV+HMGTANSGHYYS+IR R G+  G W EFNDTVV+ F+  D+ VECFGG+ET
Sbjct: 2449 KINDRLEFPVDLDMYPYTLEGRTAVRKGGTGISAAGNAEDAAEL---------RERTQSAAGHPPEYYLYRLAGVVIHMGTANSGHYYSYIRERGGERSG-WFEFNDTVVTDFNPADLEVECFGGQET 2566

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: A0A8K1C2U9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2U9_PYTOL)

HSP 1 Score: 108 bits (271), Expect = 7.840e-25
Identity = 56/121 (46.28%), Postives = 75/121 (61.98%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGDGE--WLEFNDTVVSPFDVKDMAVECFGG 119
            +++DR EFP+ELDMF +TKEG+  A    + +   +             S N    +A ++Y Y L G VVHMGTA+SGHYYSF+R + G+ D E  W EFNDT+V+PFD   + VECFGG
Sbjct: 2153 KLHDRFEFPMELDMFEYTKEGQEEARRRRSRSTSGLD------DEQNDSSTNSDRSRAPEYYQYELVGTVVHMGTAHSGHYYSFLREQEGEADAEPRWYEFNDTMVTPFDPDQIPVECFGG 2267

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: K3WT18_GLOUD (USP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT18_GLOUD)

HSP 1 Score: 108 bits (270), Expect = 1.060e-24
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAA---VAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGD-GEWLEFNDTVVSPFDVKDMAVECFGGEET 122
            +++DR EFP+ELDM+P+TK+G+       +++A+  G+            + S       A ++  Y L G VVHMGTANSGHYYSF+R +NG  D  +W EFNDTVVS F+ + +  ECFGGEET
Sbjct: 1929 KLHDRFEFPMELDMYPYTKQGQEEKRKRSSSSASNTGASDEASDXXXXXSKSSARDGRSTAPEYSQYELVGTVVHMGTANSGHYYSFLREQNGGNDYNQWYEFNDTVVSAFNPQQIPDECFGGEET 2054

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: A0A6A7FQH8_9CRUS (Ubiquitin domain containing protein (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FQH8_9CRUS)

HSP 1 Score: 105 bits (261), Expect = 1.670e-23
Identity = 60/134 (44.78%), Postives = 76/134 (56.72%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQ--------VGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRN-GDGD----GEWLEFNDTVVSPFDVKDMAVECFGGEE 121
            ++NDR EFP+ELDM P+TKE   A   A +  + S           GK G     ++S+ +T      +Y Y L GVVVHMG AN GHYYSFI+ R  G+ +    G W EFND VV   D + +A ECFGGEE
Sbjct:  655 KVNDRCEFPIELDMRPYTKEALAAKEGAKSENDNSSSNYSQKDPSEGKNGGKGEGKESEEETVQHPDSYYQYRLVGVVVHMGIANGGHYYSFIKERTKGNAEVSNLGNWFEFNDAVVRAMDPETLADECFGGEE 788

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: M4B7Y8_HYAAE (USP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7Y8_HYAAE)

HSP 1 Score: 105 bits (261), Expect = 1.740e-23
Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRKSDNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGD-GEWLEFNDTVVSPFDVKDMAVECFGGEE 121
            +++DR EFP ELDM+P+TKEG+     A A++          R  +R  S N     A ++  Y L G VVH+GTA SGHYYSF+R +    D  +W EFNDTVV+PFD   +  ECFGGEE
Sbjct: 2202 KLHDRFEFPTELDMYPYTKEGQQEKRKALASSGDDGTTSHKIRLSTRSDSMNDRRTTAPEYSQYELVGTVVHLGTALSGHYYSFLRDQQVPRDKSQWYEFNDTVVTPFDPLQIPDECFGGEE 2323

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: A0A662WUW1_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUW1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.320e-23
Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRK--SDNQTCD---KAHDHYLYHLAGVVVHMGTANSGHYYSFIRT----RNGDGDGEWLEFNDTVVSPFDVKDMAVECFGGEET 122
            +++DR EFP ELDM+P+TKEG+      A+++        IG   +R    SD  T D    A ++  Y L G VVH+GTA+SGHYYSF+R     RN D   +W EFNDT+V+PFD + +  ECFGGEET
Sbjct:  564 KLHDRFEFPTELDMYPYTKEGQQEKRKRASSSADD----NIGSHEARLSTHSDGSTDDGRTTAPEYSQYELVGTVVHLGTAHSGHYYSFLRDQQTQRNKD---QWYEFNDTLVTPFDAEQIPEECFGGEET 687

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BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Match: A0A662WEI6_9STRA (USP domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEI6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.240e-23
Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 0

Query:    1 QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRK--SDNQTCD---KAHDHYLYHLAGVVVHMGTANSGHYYSFIRT----RNGDGDGEWLEFNDTVVSPFDVKDMAVECFGGEET 122
            +++DR EFP ELDM+P+TKEG+      A+++        +G   +R    SD  T D    A ++  Y L G VVH+GTA+SGHYYSF+R     RN D   +W EFNDT+V+PFD + +  ECFGGEET
Sbjct: 2262 KLHDRFEFPTELDMYPYTKEGQQEKRKRASSSADD----NVGSHEARLSTHSDGSTDDGRTTAPEYSQYELVGTVVHLGTAHSGHYYSFLRDQQTQRNKD---QWYEFNDTLVTPFDAEQIPEECFGGEET 2385

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot

BLAST of mRNA_H-elongata_contig49750.12186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN62_ECTSI	1.430e-38	62.81	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KLT8_9PHAE	2.630e-38	62.81	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
I2CRD3_NANGC	6.580e-31	52.34	Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Na...	[more]
A0A4D9CLS1_9STRA	4.400e-30	50.78	USP domain-containing protein n=5 Tax=Monodopsidac...	[more]
A0A8K1C2U9_PYTOL	7.840e-25	46.28	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WT18_GLOUD	1.060e-24	45.24	USP domain-containing protein n=1 Tax=Globisporang...	[more]
A0A6A7FQH8_9CRUS	1.670e-23	44.78	Ubiquitin domain containing protein (Fragment) n=2...	[more]
M4B7Y8_HYAAE	1.740e-23	46.72	USP domain-containing protein n=1 Tax=Hyaloperonos...	[more]
A0A662WUW1_9STRA	2.320e-23	46.56	USP domain-containing protein (Fragment) n=1 Tax=N...	[more]
A0A662WEI6_9STRA	3.240e-23	45.80	USP domain-containing protein n=1 Tax=Nothophytoph...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 2..110 e-value: 9.5E-14 score: 51.5
None	No IPR available	PANTHER	PTHR24006:SF692	UBIQUITIN-SPECIFIC PEPTIDASE 9	coord: 2..120
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 2..120
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00973	USP_2	coord: 64..81
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 1..121 score: 16.8
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 2..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig49750	contig	H-elongata_contig49750:1351..2827 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig49750.12186.1	mRNA_H-elongata_contig49750.12186.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig49750 1351..2827 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig49750.12186.1 ID=prot_H-elongata_contig49750.12186.1|Name=mRNA_H-elongata_contig49750.12186.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
QINDRLEFPLELDMFPFTKEGRVAAVAAAAAAEGSVQVGKIGRFPSRRKS
DNQTCDKAHDHYLYHLAGVVVHMGTANSGHYYSFIRTRNGDGDGEWLEFN
DTVVSPFDVKDMAVECFGGEETSRRGGGSSSSSSAVVYSAP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR018200	USP_CS
IPR028889	USP_dom
IPR038765	Papain-like_cys_pep_sf