prot_H-elongata_contig49740.12185.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig49740.12185.1
Unique Name	prot_H-elongata_contig49740.12185.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	210

Homology

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: D7FJX2_ECTSI (Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX2_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 2.250e-124
Identity = 177/202 (87.62%), Postives = 192/202 (95.05%), Query Frame = 0

Query:    1 MEESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            ++ESL++FEKMR G++ EGSATLRLKMDMTSPNPNMWDQVAYR+RYIPHPHAGD WC+YPTYD+THCL+   LEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVK G VRGWDDPRMPTIKGLRRRGYTA+ILN+FCEDIGVTRNDN+IEVEKLEHWARS +NVSSRRVMG LSPI+V
Sbjct:  159 VQESLDLFEKMRTGQMGEGSATLRLKMDMTSPNPNMWDQVAYRVRYIPHPHAGDKWCVYPTYDYTHCLV-DSLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKGGKVRGWDDPRMPTIKGLRRRGYTAEILNRFCEDIGVTRNDNLIEVEKLEHWARSGLNVSSRRVMGALSPIKV 359

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A835Z3U2_9STRA (Glutaminyl-tRNA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3U2_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.690e-103
Identity = 150/201 (74.63%), Postives = 174/201 (86.57%), Query Frame = 0

Query:    2 EESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            EE+L +F  MR G+LEE +ATLRLKMDMTS NPNMWDQ+AYRIRY PHPHAGD WCIYPTYD+THC++   +E IDYSICTLEFE+RRESYYWLLEAL++YRPKVYEFARLNIT TVLSKR+LLKLVK+G+VRGWDDPRMPTIK LRRRGYTA+ LN FC DIGV+RN+ +IEVE+L +WAR+ MN ++ R M  L PI V
Sbjct:  149 EENLRLFGDMRKGKLEENAATLRLKMDMTSSNPNMWDQIAYRIRYTPHPHAGDNWCIYPTYDYTHCIV-DSIEHIDYSICTLEFESRRESYYWLLEALNIYRPKVYEFARLNITYTVLSKRRLLKLVKQGLVRGWDDPRMPTIKSLRRRGYTAEALNAFCTDIGVSRNETIIEVERLTYWARTLMNDTAPRAMACLEPILV 348

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: W7TED8_9STRA (Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TED8_9STRA)

HSP 1 Score: 318 bits (815), Expect = 2.460e-102
Identity = 151/202 (74.75%), Postives = 175/202 (86.63%), Query Frame = 0

Query:    1 MEESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            +EESL +FE MR G+ +E  ATLR+KMDM+SPN NM+DQVAYRI++IPHPHAGD W +YPTYDFTHC+I   LE IDYSICTLEFETRRESYYW+LEALDLYRPKVYEF+RLNIT TVLSKRKLLKLVK   V GWDDPRMPTIKGLRRRGYTA ILN FC+DIGVTRN+N+I+ E+L+HWAR+ +N +++R MGV  PI V
Sbjct:  177 IEESLRLFEDMRLGKFKENEATLRMKMDMSSPNFNMYDQVAYRIKFIPHPHAGDTWVVYPTYDFTHCII-DSLEHIDYSICTLEFETRRESYYWVLEALDLYRPKVYEFSRLNITYTVLSKRKLLKLVKAKWVAGWDDPRMPTIKGLRRRGYTADILNAFCKDIGVTRNENIIQYERLQHWARTILNETAKRAMGVQDPILV 377

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A024TFW5_9STRA (Glutamine-tRNA ligase, variant n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFW5_9STRA)

HSP 1 Score: 288 bits (737), Expect = 8.000e-93
Identity = 136/200 (68.00%), Postives = 162/200 (81.00%), Query Frame = 0

Query:    3 ESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            E+L  FE+MR G   EG+A+LRLKM + SPNPNMWD VAYRI+++PHPH GD WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC+DIGVTR  + I++E+L   AR+ +  SS+R M VL P+ V
Sbjct:  185 ENLAQFERMRRGEYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDQLDLYKPTVYEFARLNITYTVLSKRKLLKLVTHGHVRGWDDPRLATLNGLRRRGFSAPILNAFCKDIGVTRVQSTIQIERLYAVARAQLGDSSKRAMAVLDPVPV 383

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A6G0X631_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X631_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.000e-91
Identity = 139/202 (68.81%), Postives = 163/202 (80.69%), Query Frame = 0

Query:    1 MEESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            +EE+L  FEKMR G   EG+A+LRLKM + SPNPNMWD VAYRI+++PHPH GD WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+P+VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC++IGVTR  + I++EKL   ARS    S  R M VL P+EV
Sbjct:  175 VEENLVHFEKMRRGEYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDQLDLYKPQVYEFARLNITYTVLSKRKLLKLVTHGHVRGWDDPRLATLNGLRRRGFSAPILNAFCKEIGVTRVQSTIQIEKLYAVARSMFGDSCARAMAVLEPVEV 375

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A397A200_9STRA (tRNA-synt_1c domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A200_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.550e-91
Identity = 131/198 (66.16%), Postives = 161/198 (81.31%), Query Frame = 0

Query:    3 ESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPI 200
            ++L  FE+MR G   EG+A+LRLKM + SPNPNMWD VAYRI+++PHPH G  WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLNIT TVLSKRKLLKLV  G+VRGWDDPR+ T+ GLRRRG++A ILN FC+DIGVTR  + I++++L   AR+ +  +S+R M VL P+
Sbjct:  193 DNLRQFERMRRGEYAEGAASLRLKMHLDSPNPNMWDFVAYRIKFVPHPHIGSKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDVLDLYKPTVYEFARLNITFTVLSKRKLLKLVTHGLVRGWDDPRLATLNGLRRRGFSAPILNAFCKDIGVTRVQSTIQIQRLYAVARAHLGDTSKRAMAVLDPV 389

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A024THX4_9STRA (Glutamine-tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THX4_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.010e-90
Identity = 136/200 (68.00%), Postives = 162/200 (81.00%), Query Frame = 0

Query:    3 ESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            E+L  FE+MR G   EG+A+LRLKM + SPNPNMWD VAYRI+++PHPH GD WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLNIT TVLSKRKLLKLV  G VRGWDDPR+ T+ GLRRRG++A ILN FC+DIGVTR  + I++E+L   AR+ +  SS+R M VL P+ V
Sbjct:  185 ENLAQFERMRRGEYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDQLDLYKPTVYEFARLNITYTVLSKRKLLKLVTHGHVRGWDDPRLATLNGLRRRGFSAPILNAFCKDIGVTRVQSTIQIERLYAVARAQLGDSSKRAMAVLDPVPV 383

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A067CIY7_SAPPC (Glutaminyl-tRNA synthetase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIY7_SAPPC)

HSP 1 Score: 287 bits (734), Expect = 1.180e-90
Identity = 133/202 (65.84%), Postives = 165/202 (81.68%), Query Frame = 0

Query:    1 MEESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            ++++L  FE MR G+  EG+A+LRLKM + SPNPNMWD VAYRI+++PHPH GD WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLN+T TV+SKRKLLKLV KGVVRGWDDPR+ T+ GL+RRG++A ILN FC++IGVTR  + IE+++L   AR+ +  +S R M VL PI V
Sbjct:  178 VDDNLKHFEMMRRGQYAEGAASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDQLDLYKPMVYEFARLNMTYTVMSKRKLLKLVTKGVVRGWDDPRLSTLNGLKRRGFSAPILNAFCKEIGVTRTQSTIEIDRLYAVARNMLGDASARAMAVLDPIPV 378

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A8K1FK98_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK98_PYTOL)

HSP 1 Score: 288 bits (737), Expect = 1.250e-90
Identity = 134/202 (66.34%), Postives = 163/202 (80.69%), Query Frame = 0

Query:    1 MEESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIEV 202
            ++E+L  FEKMR G   EG A LR+KMD+ SPNPNMWD VAYRI+Y+PHPH GD WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+PKVYEFARL +T T LSKRKLLKLV  G+VRGWDDPRM T+ GL+RRG+T +I+ +FC+DIGVTR  + I++E+L   AR  +   S+R+M VL P+EV
Sbjct:  177 VDENLLEFEKMRVGLYAEGEACLRMKMDLASPNPNMWDHVAYRIKYVPHPHIGDKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDELDLYKPKVYEFARLAMTYTQLSKRKLLKLVTSGMVRGWDDPRMGTLNGLKRRGFTPEIIKRFCKDIGVTRVQSTIQIERLYSVARDVLGDKSKRIMAVLDPVEV 377

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BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Match: A0A1W0A4N3_9STRA (Glutaminyl-tRNA synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4N3_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.320e-90
Identity = 133/199 (66.83%), Postives = 162/199 (81.41%), Query Frame = 0

Query:    3 ESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHPHAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALDLYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRRGYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPIE 201
            E+L  FEKMR G   EG A+LRLKM + SPNPNMWD VAYRI+++PHPH GD WCIYPTYD+THC++   LE IDYSICTLEFETRRESYYWLL+ LDLY+P VYEFARLN+T TV+SKRKLLKLV KG+VRGWDDPR+ T+ GL+RRG++A+ILN FC++IGVTR  + IE+E+L   AR+ +   S R M VL P++
Sbjct:  177 ENLLHFEKMRRGEYAEGEASLRLKMQLESPNPNMWDFVAYRIKFVPHPHIGDKWCIYPTYDYTHCIV-DALEHIDYSICTLEFETRRESYYWLLDQLDLYKPMVYEFARLNMTYTVMSKRKLLKLVTKGIVRGWDDPRLSTLNGLKRRGFSARILNAFCKEIGVTRTQSTIEIERLYAVARNILGDESPRAMAVLDPVK 374

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot

BLAST of mRNA_H-elongata_contig49740.12185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJX2_ECTSI	2.250e-124	87.62	Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus sili...	[more]
A0A835Z3U2_9STRA	1.690e-103	74.63	Glutaminyl-tRNA synthetase n=1 Tax=Tribonema minus...	[more]
W7TED8_9STRA	2.460e-102	74.75	Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxI...	[more]
A0A024TFW5_9STRA	8.000e-93	68.00	Glutamine-tRNA ligase, variant n=1 Tax=Aphanomyces...	[more]
A0A6G0X631_9STRA	1.000e-91	68.81	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A397A200_9STRA	1.550e-91	66.16	tRNA-synt_1c domain-containing protein n=3 Tax=Aph...	[more]
A0A024THX4_9STRA	1.010e-90	68.00	Glutamine-tRNA ligase n=2 Tax=Aphanomyces invadans...	[more]
A0A067CIY7_SAPPC	1.180e-90	65.84	Glutaminyl-tRNA synthetase n=2 Tax=Saprolegnia Tax...	[more]
A0A8K1FK98_PYTOL	1.250e-90	66.34	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A1W0A4N3_9STRA	1.320e-90	66.83	Glutaminyl-tRNA synthetase n=1 Tax=Thraustotheca c...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020058	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain	PFAM	PF00749	tRNA-synt_1c	coord: 2..186 e-value: 2.6E-51 score: 174.4
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..193 e-value: 9.6E-77 score: 260.2
None	No IPR available	PANTHER	PTHR43097:SF4	GLUTAMINE--TRNA LIGASE	coord: 1..202
None	No IPR available	PANTHER	PTHR43097	GLUTAMINE-TRNA LIGASE	coord: 1..202
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 2..187

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig49740	contig	H-elongata_contig49740:309..2836 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig49740.12185.1	mRNA_H-elongata_contig49740.12185.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig49740 178..2863 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig49740.12185.1 ID=prot_H-elongata_contig49740.12185.1|Name=mRNA_H-elongata_contig49740.12185.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bp
MEESLNIFEKMRNGRLEEGSATLRLKMDMTSPNPNMWDQVAYRIRYIPHP
HAGDAWCIYPTYDFTHCLILKRLEDIDYSICTLEFETRRESYYWLLEALD
LYRPKVYEFARLNITRTVLSKRKLLKLVKKGVVRGWDDPRMPTIKGLRRR
GYTAKILNKFCEDIGVTRNDNVIEVEKLEHWARSSMNVSSRRVMGVLSPI
EVRGAAALP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020058	Glu/Gln-tRNA-synth_Ib_cat-dom
IPR014729	Rossmann-like_a/b/a_fold