prot_H-elongata_contig49641.12167.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49641.12167.1
Unique Nameprot_H-elongata_contig49641.12167.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig49641.12167.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 62.0 bits (149), Expect = 6.550e-9
Identity = 40/90 (44.44%), Postives = 48/90 (53.33%), Query Frame = 0 
Query:   20 PVGGSLRMDITTKREALLCH--DDNTKGLLLDVTVTNPMGIFHLVSSTRRGGNALRLAKKRRIDTYEGFFYPATYTFQTLAFFTCGDVGQ 107
            P  GSLRMD+ T   AL     D  +  L+LDVTVTNP+G   L  +  R G AL  A K +   Y G + P TY    LAF TCGD  +
Sbjct: 1880 PGQGSLRMDVVTDHGALFNESADYKSSALMLDVTVTNPLGPMALARAGTRAGFALEEAVKAKQAKYGGSYRP-TYKMIPLAFSTCGDYSK 1968
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49641.12167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN6.550e-944.44Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49641contigH-elongata_contig49641:1774..2097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49641.12167.1mRNA_H-elongata_contig49641.12167.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49641 1774..2097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49641.12167.1 ID=prot_H-elongata_contig49641.12167.1|Name=mRNA_H-elongata_contig49641.12167.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
NKWPARSSATAVSRTTSIAPVGGSLRMDITTKREALLCHDDNTKGLLLDV
TVTNPMGIFHLVSSTRRGGNALRLAKKRRIDTYEGFFYPATYTFQTLAFF
TCGDVGQA
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