prot_H-elongata_contig49601.12160.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A6H5KXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 5.290e-17 Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVSIVSQNLI 47
MHR++AFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVS + NL+
Sbjct: 1 MHRNRAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVS--NDNLV 45
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: D8LH73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH73_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 5.300e-17 Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVSIVSQNLI 47
MHR++AFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVS + NL+
Sbjct: 1 MHRNRAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVS--NDNLV 45
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A835Z1U7_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U7_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 7.500e-12 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVS 40
MHR+KAFFK+TR+GK+L +V+DHYLRDDI CG+LAGK ++
Sbjct: 1 MHRNKAFFKRTRRGKVLHIVNDHYLRDDIACGTLAGKELT 40
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: W7TRQ4_9STRA (Exosome complex exonuclease rrp44 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRQ4_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.830e-9 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVSIVS-QNLIGVMFGVIVG 56
M RSKAFFK+TR+GK++R++ +HYLRDDIG G+L G S ++ + L+ +M G + G
Sbjct: 1 MIRSKAFFKRTRRGKVMRILEEHYLRDDIGLGTLHGSECSALTPEELVQLMEGRVEG 57
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A4D9D432_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D432_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.750e-8 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVSIVS-QNLIGVMFG 52
M RSK FFK+TR+GK++R++ +HYLRDDIG G+L G S ++ + L+ +M G
Sbjct: 1 MIRSKTFFKRTRRGKVMRILEEHYLRDDIGLGTLHGSECSALTPEELVQLMEG 53
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A2S2QPA3_9HEMI (Exosome complex exonuclease RRP44 n=1 Tax=Sipha flava TaxID=143950 RepID=A0A2S2QPA3_9HEMI) HSP 1 Score: 53.9 bits (128), Expect = 5.820e-7 Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query: 4 SKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGK 37
SK F +KT++G IL++V +HYLRDDIGCGSLA K
Sbjct: 7 SKTFIRKTKRGNILKIVREHYLRDDIGCGSLACK 40
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A1Y1I3C2_KLENI (Ribonuclease II/R family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3C2_KLENI) HSP 1 Score: 52.8 bits (125), Expect = 1.490e-6 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLA 35
M++ K FFKKTR GKIL+V +HYLRDDI CGSLA
Sbjct: 1 MYQQKQFFKKTRGGKILKVHREHYLRDDIVCGSLA 35
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A1R1PWH7_ZANCU (Exosome complex exonuclease RRP44 n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PWH7_ZANCU) HSP 1 Score: 52.8 bits (125), Expect = 1.490e-6 Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLAGKPVSIVS 43
M RSK+F KKT+KGK++RVV +HYLRDDI CG K + +S
Sbjct: 1 MLRSKSFVKKTKKGKVVRVVKEHYLRDDIQCGYEGCKDPNCIS 43
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: A0A2I3BR88_MOUSE (Exosome complex exonuclease RRP44 n=1 Tax=Mus musculus TaxID=10090 RepID=A0A2I3BR88_MOUSE) HSP 1 Score: 50.1 bits (118), Expect = 2.590e-6 Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGSLA 35
M RSK F KKTR G ++++V +HYLRDDIGCG+ A
Sbjct: 1 MLRSKTFLKKTRAGGVVKIVREHYLRDDIGCGAPA 35
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Match: G5C9E4_HETGA (Exosome complex exonuclease RRP44 n=1 Tax=Heterocephalus glaber TaxID=10181 RepID=G5C9E4_HETGA) HSP 1 Score: 52.0 bits (123), Expect = 2.790e-6 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0
Query: 1 MHRSKAFFKKTRKGKILRVVSDHYLRDDIGCGS 33
M +SK FFKKTR G +L++V +HYLRDDIGCG+
Sbjct: 1 MLKSKTFFKKTRTGGVLKIVREHYLRDDIGCGA 33 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49601.12160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig49601.12160.1 ID=prot_H-elongata_contig49601.12160.1|Name=mRNA_H-elongata_contig49601.12160.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bpback to top |