prot_H-elongata_contig4959.12157.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4959.12157.1
Unique Nameprot_H-elongata_contig4959.12157.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Match: D7FKH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH6_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 3.950e-21
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 ALEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKALEV 53
            ALEV  RLVDQVDDHFGR+HGVY SAL+DMALM+KSMG+HQEATE YLKALEV
Sbjct:  153 ALEVAERLVDQVDDHFGRAHGVYGSALSDMALMLKSMGRHQEATETYLKALEV 205          
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Match: A0A1V9Z175_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z175_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 9.490e-7
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 ALEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKALEV 53
            AL++     D+V +HFG+ H VYAS LN+MALM K+M Q  EA   Y +AL V
Sbjct:  303 ALDMATICRDRVAEHFGKDHPVYASTLNNMALMQKNMSQLTEAIATYEEALRV 355          
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Match: A0A024UG34_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG34_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.260e-6
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    2 LEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKALEV 53
            LE+     D V DHFG  H VYAS LN++ALM K++ Q  EA E Y  AL V
Sbjct:   72 LEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRV 123          
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Match: A0A067CX27_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CX27_SAPPC)

HSP 1 Score: 50.4 bits (119), Expect = 8.290e-6
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    1 ALEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKALEV 53
            AL++     D V DHFG  H VYAS LN++ALM K++ Q  +A   Y +AL V
Sbjct:   75 ALDMALICRDTVKDHFGNDHPVYASTLNNIALMQKNLSQLTDAIATYEEALRV 127          
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Match: A0A3R6YC42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YC42_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.460e-6
Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    2 LEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKALEV 53
            LE+     D V DHFG  H VYAS LN++ALM K++ Q  EA E Y  AL V
Sbjct:  164 LEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRV 215          
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Match: A0A1V9Z3R8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3R8_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.510e-6
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    1 ALEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKALEV 53
            AL++     D V +HFG  H VYAS LN++ALM K++ +  EA E Y +AL V
Sbjct:  297 ALDIAEICRDNVKEHFGTEHPVYASTLNNIALMQKNLSKLTEAIETYEEALRV 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4959.12157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FKH6_ECTSI3.950e-2184.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9Z175_9STRA9.490e-750.94Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024UG34_9STRA8.260e-651.92Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A067CX27_SAPPC8.290e-647.17Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3R6YC42_9STRA8.460e-651.92Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9Z3R8_9STRA8.510e-647.17Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..53
e-value: 6.9E-7
score: 31.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 8..52
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 24..53
score: 10.069

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4959contigH-elongata_contig4959:11416..11574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4959.12157.1mRNA_H-elongata_contig4959.12157.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4959 11416..11574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4959.12157.1 ID=prot_H-elongata_contig4959.12157.1|Name=mRNA_H-elongata_contig4959.12157.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
ALEVTFRLVDQVDDHFGRSHGVYASALNDMALMMKSMGQHQEATEVYLKA
LEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom