prot_H-elongata_contig49578.12153.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49578.12153.1
Unique Nameprot_H-elongata_contig49578.12153.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length750
Homology
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: D7G700_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G700_ECTSI)

HSP 1 Score: 518 bits (1333), Expect = 9.720e-166
Identity = 364/824 (44.17%), Postives = 456/824 (55.34%), Query Frame = 0
Query:    1 MFPGLPEQAALSVLQSCGGDLSVAVDEALTITSLGSLTREGPFLAETPPNAGTPRELWRD--------GSLSYSASTSIG---NDEAVLPAPPPGEGGAEGTRHSGAFSSPLVAGDSDTARET-ENRRRKLPLGSNKGRYVMGSGELGLLAELQIPRRGAVVALPDHFLRVPRAITTAAADVTPAAAVEERGDQDVSGEDIGVAMSPLVNLDFDSSDDGGENHKLARLDPLVM------------------PSTRGAQRRSESFFGRHPLEEVENEDARSSCDA--------EDIFVARGKET-SVNHDHEEK-----LADGKPAS-----TGVRPARLGMGAFWEEPSVPAQSVETATAAKRIAAFLPGTRFRVAVDKGVTGLGITVKEIRGCFYVYRLQTLPDGSPGAAEEAGIKAGDELLGVEELDFERERWSMDQLVSYMSELVGVVILSVMRGQGPLPQSSTSDERSGMSHGVKRNVDGLSADGGAAGSSECGNTDGAEARGVDKQARRLIEVLQEEELSQPGEAEGVSRMFCQITDRARQWDSGELWLPVAAPSRRRSSREAIAALVDRWKPGEPAGWEVSGSSD-------DDGDSSERYRSNGAMSSIRNNRRGVGHDSAGLQNQEEDDPAADLDKIGTALLGRPLFAADPL--SRVDGHGGCSSC----------GGGRYWSPWTKLVALEKQGNDSLQDAVVPTWGLRKALNVRVLGEE-------NFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 749
            MFP  P Q   ++ ++CG D S A+DEALT+ SLG+   +  F          P + W D        G   ++  TS G   +  A   AP         TR   A    +   D+ +A    EN   KLP    + RYV+GSGELGLL ELQ+PRRGAVV LP  FLRVP   +  +    PAA      D D    +     SP +     S    GE     R DP                     PS R +     +     P   VE+ DA+             E +  + GKE  ++    + K        G+P       T  RP   G  A+       AQ VETA+AA+RIA F PGTRFRVAVDKGVTGLGITVKEIRG F+VY+LQ L DGS GAAEEAG+KAGD+LLGVEELDFE ERW MDQLVSYM EL+GVVIL VMRG GPLPQ+  SD  +GMS+GV R+ +   A  G+AG+ + GN  GA    V ++ARRL+EVL+EE+LS+P EA  +SR++CQI DRARQWD+GELWL V   +RR  SR+ +A + ++W P  P GW+ S SS+            +ER  S+ +  S+  +      D  G Q  + D+P  DLD IG ALLG+PLF+ DPL   RVD  G  ++           GGG YWSPW +LVALE +   + +  VVPT GLRKALNVR+L +              G  G  + P   Q A+Y++WVMDVESGAEWRVRRCH EF+EL EVCTG+RPSLARLDFP  L    +KET G+V ARRPR +
Sbjct:   11 MFPDTPHQTLATIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPVDYWEDAPALLPALGERRFAPETSAGPVSSSRAHDTAPE--------TRRPSANGGGVTYADAASAMSPRENGLPKLPWEGKEKRYVIGSGELGLLNELQMPRRGAVVPLPVDFLRVPVGSSQPSTPPAPAAEPLIVLDPDGRSSEPNQVPSPTLASVRGSVVWDGER---GRGDPASSSPGASFGGRQFGSPAKNTPSVRASPTLLRNVGENQPT--VESTDAKPQMKVVGGDRNGGERVGDSPGKEAWAIGSSGQRKKPVPTALRGEPIPANSRRTDSRPPARGGSAWGAGAGGNAQKVETASAAERIANFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEEDGAADGSAGT-DGGNESGAST--VQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARR-PSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSLVPDPAATKRDGVGAQ--DGDEPGTDLDTIGAALLGQPLFS-DPLMEGRVDEAGAAAAARSSLADGDDEGGGHYWSPWPQLVALESKA--AQRTTVVPTQGLRKALNVRILEQPPXXXXXXXXXXXDGKGGRSSAP---QTASYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLP--DVKETAGVVDARRPRLE 807          
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A6H5KQH5_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH5_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 5.150e-151
Identity = 342/820 (41.71%), Postives = 430/820 (52.44%), Query Frame = 0
Query:    1 MFPGLPEQAALSVLQSCGGDLSVAVDEALTITSLGSLTREGPFLAETPPNAGTPRELWRD--------GSLSYSASTSIG---NDEAVLPAPPPGEGGAEGTRHSGAFSSPLVAGDSDTARETENRRRKLPLGSNKGRYVMGSGELGLLAELQIPRRGAVVALPDHFLRVPRAITTAAADVTPAAAVEERGDQDVSGEDIGVAMSPLVNLDFDSSDDGGENHKLARLDPLVMPSTRGA--------------QRRSESFFGRHPLEEVEN---------------------EDARSSCDAEDIFVAR----------GKET-SVNHDHEEKL-------ADGKPAS--TGVRPARLGMGAFWEEPSVPAQSVETATAAKRIAAFLPGTRFRVAVDKGVTGLGITVKEIRGCFYVYRLQTLPDGSPGAAEEAGIKAGDELLGVEELDFERERWSMDQLVSYMSELVGVVILSVMRGQGPLPQSSTSDERSGMSHGVKRNVDGLSADGGAAGSSECGNTDGAEARGVDKQARRLIEVLQEEELSQPGEAEGVSRMFCQITDRARQWDSGELWLPVAAPSRRRSSREAIAALVDRWKPGEPAGWEVSGSSDDDG--DSSERYRSNGAMSSIRNNRRGVGHDSA-----GLQNQEEDDPAADLDKIGTALLGRPLFAADPL--SRVDGHGGCSSC----------GGGRYWSPWTKLVALEKQGNDSLQDAVVPTWGLRKALNVRVLGEENFA-------------AKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLAR 722
            MFP  P Q   ++ ++CG D S A+DEALT+ SLG+   +  F          P + W D        G   + A TS G   +  A   AP         TR   A      A  +      EN   KLP    + RYV+GSGELGLL ELQ+PRRGA+V LP  FLRVP   +  +   TP A                 A  PL+ LD D     G + +  ++    + S RG+                   SF GR     V+N                     E A +    + +   R          GKE  ++    + K         +  PAS     RP   G  A+        Q VETA+AA+RIA F PGTRFRVAVDKGVTGLGITVKEIRG F+VY+LQ+L DGS GAAEEAG+KAGD+LLGVEELDFE ERW MDQLVSYM EL+GVVIL VMRG GPLPQ+  SD  +GMS+GV R+ +G   DG A G              V ++ARRL+EVL+EE LS+  EA  +SR++CQI DRA+QWD+GELWL V   +RR  SR+ +A + ++W P  P GW+   SS+     +SS   R+  + S I ++   +  D A     G   Q+ D+P  DLD IG ALLG+PLF+ DPL   RVD  G  +            GGG YWSPW +LVALE +   + +  VVPT GLRKALNVR+L +                 AK G + A       Q  +Y++WVMDVESGAEWRVRR H EF+EL EVCTG+RPSLAR
Sbjct:   11 MFPDTPHQTLATIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPADYWEDAPALLPALGERRFVAETSTGPVSSSRAHDTAPE--------TRRPSANGGVTYADAASAMSPKENGLPKLPWEGKEERYVIGSGELGLLNELQMPRRGAIVPLPVGFLRVPGGFSQPS---TPPA----------------TAAEPLIVLDPD-----GRSSEPNQVSSPTLASVRGSTVWDSERGRGNPASSSPGASFGGRQFRSPVKNTPPVRASPTLLRNVGEHQPTVESANAKAQMKVVGGDRNGGVRVGDNPGKEAWAIRSSGQRKKPVPTTLRGEPSPASRKADFRPPVRGGSAWGAGAGSNNQKVETASAAERIANFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQSLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDLENGMSYGVARSNEG---DGAADGXXXXXXXXXGGVSTVQRRARRLVEVLEEEGLSKTSEAADISRLYCQIDDRAKQWDTGELWLSVNDMARR-PSRDTLAVMANQWHPDPPPGWDELDSSEGRSLPNSSGAQRAERSSSDISDDP--LVPDPAATKRDGFGGQDGDEPGIDLDTIGAALLGQPLFS-DPLMEGRVDEAGAAAGARSSVAGGDDEGGGHYWSPWPQLVALESKA--AQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXXSDDAKGGRSSAP------QTVSYLVWVMDVESGAEWRVRRRHPEFSELWEVCTGMRPSLAR 783          
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A7S2CVH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVH7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.310e-11
Identity = 47/107 (43.93%), Postives = 58/107 (54.21%), Query Frame = 0
Query:  643 VVPTWGLRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 749
            VV   GLR AL +RVLG E+            D  E     Y+IWV+DVESGAEWR+ R + EF +L E    LRPSL +LDFP R     + ET   V  R+ R +
Sbjct:   11 VVSMDGLRPALCIRVLGAEHL----------EDHTE-----YLIWVLDVESGAEWRISRRYREFFDLAERLQALRPSLLKLDFPARRPA--LYETVATVNDRKARLE 100          
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: F0XY90_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY90_AURAN)

HSP 1 Score: 62.4 bits (150), Expect = 3.770e-6
Identity = 44/106 (41.51%), Postives = 53/106 (50.00%), Query Frame = 0
Query:  644 VPTWGLRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 749
            V T  LR AL VR+LG +            AD        Y++WV+DV +GAEWRV R   EF EL E    LRPS  +LDFP R     + ET   V  RR R +
Sbjct:  314 VDTARLRPALCVRILGTDY-----------ADDHT----VYILWVLDVLAGAEWRVPRRFREFFELHEELVALRPSTEKLDFPTRRP--SLYETTHSVNDRRVRLE 402          
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A7S3NP42_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP42_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.790e-6
Identity = 41/101 (40.59%), Postives = 51/101 (50.50%), Query Frame = 0
Query:  649 LRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ 749
            LR AL VR+LG +                      Y++WV+DV +GAEWRV+R   EF EL E    LRPS+ +LDFP R     I ET   V  RR R +
Sbjct:  407 LRPALCVRILGTDYV---------------EDHTVYILWVLDVLAGAEWRVQRRFREFFELHEELIKLRPSIDKLDFPTRRP--SIYETVHTVNDRRVRLE 490          
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Match: A0A7S2G0S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0S3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.080e-6
Identity = 38/102 (37.25%), Postives = 48/102 (47.06%), Query Frame = 0
Query:  644 VPTWGLRKALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVRRCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARR 745
            VPT GLR AL +RV+               A         YV+W+ DV+SGAEW   R   +F  LR V   LRPSL  L+FP +     + +T   V  RR
Sbjct:    7 VPTSGLRPALCIRVI---------------ACDYNDYHTQYVVWIQDVQSGAEWHCSRRFRDFRHLRAVVNSLRPSLDHLEFPMQ---RPLYDTMATVTTRR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49578.12153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G700_ECTSI9.720e-16644.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQH5_9PHAE5.150e-15141.71PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2CVH7_9STRA9.310e-1143.93Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0XY90_AURAN3.770e-641.51Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NP42_9STRA3.790e-640.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2G0S3_9STRA7.080e-637.25Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 333..410
e-value: 0.0038
score: 26.4
IPR001478PDZ domainPROSITEPS50106PDZcoord: 325..410
score: 10.978
NoneNo IPR availableGENE3D2.30.42.10coord: 308..417
e-value: 2.0E-6
score: 29.5
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 319..416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49578contigH-elongata_contig49578:949..4057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49578.12153.1mRNA_H-elongata_contig49578.12153.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49578 928..4057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49578.12153.1 ID=prot_H-elongata_contig49578.12153.1|Name=mRNA_H-elongata_contig49578.12153.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=750bp
MFPGLPEQAALSVLQSCGGDLSVAVDEALTITSLGSLTREGPFLAETPPN
AGTPRELWRDGSLSYSASTSIGNDEAVLPAPPPGEGGAEGTRHSGAFSSP
LVAGDSDTARETENRRRKLPLGSNKGRYVMGSGELGLLAELQIPRRGAVV
ALPDHFLRVPRAITTAAADVTPAAAVEERGDQDVSGEDIGVAMSPLVNLD
FDSSDDGGENHKLARLDPLVMPSTRGAQRRSESFFGRHPLEEVENEDARS
SCDAEDIFVARGKETSVNHDHEEKLADGKPASTGVRPARLGMGAFWEEPS
VPAQSVETATAAKRIAAFLPGTRFRVAVDKGVTGLGITVKEIRGCFYVYR
LQTLPDGSPGAAEEAGIKAGDELLGVEELDFERERWSMDQLVSYMSELVG
VVILSVMRGQGPLPQSSTSDERSGMSHGVKRNVDGLSADGGAAGSSECGN
TDGAEARGVDKQARRLIEVLQEEELSQPGEAEGVSRMFCQITDRARQWDS
GELWLPVAAPSRRRSSREAIAALVDRWKPGEPAGWEVSGSSDDDGDSSER
YRSNGAMSSIRNNRRGVGHDSAGLQNQEEDDPAADLDKIGTALLGRPLFA
ADPLSRVDGHGGCSSCGGGRYWSPWTKLVALEKQGNDSLQDAVVPTWGLR
KALNVRVLGEENFAAKSGLAGAKADPRESQPAAYVIWVMDVESGAEWRVR
RCHAEFAELREVCTGLRPSLARLDFPQRLSFNKIKETPGMVAARRPRYQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf