prot_H-elongata_contig49540.12144.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49540.12144.1
Unique Nameprot_H-elongata_contig49540.12144.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig49540.12144.1 vs. uniprot
Match: D8LDR2_ECTSI (Cas1_AcylT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDR2_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 8.590e-26
Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = 0
Query:    5 LSPSRCRRA--GRHITVVGDSTERFVYYALLRSLGEATPNAHNTSIEKHSDFSWKASDDSGTRFDFLWAPFAQNLTDRV 81
            + PS    A  GR++ VVGDS  RFVY+AL+RSLGEATP AH+T+IEKHSDFSW+ASDD GTRF FLWAP  ++L +RV
Sbjct:  667 MPPSEVEEALKGRNVVVVGDSVNRFVYWALVRSLGEATPMAHDTTIEKHSDFSWQASDDWGTRFSFLWAPEVEDLNERV 745          
BLAST of mRNA_H-elongata_contig49540.12144.1 vs. uniprot
Match: A0A835YWF0_9STRA (10 TM acyl transferase domain found in Cas1p-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWF0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.980e-15
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    2 YQTLSPSRCRRAG--RHITVVGDSTERFVYYALLRSLGEATPNAHNTSIEKHSDFSWKASDDSG-TRFDFLWAPFAQNLT 78
            ++ L P    RA   RH+  VGDS  R +YYA LR +G+ TP AH++S E+H+D SW +   +G TR  F WAP+A+N+T
Sbjct:  639 FRYLPPDEIARASAARHVAFVGDSELRMMYYAALRGIGQTTPQAHDSSAERHADLSWASGTGAGATRVSFRWAPYARNVT 718          
BLAST of mRNA_H-elongata_contig49540.12144.1 vs. uniprot
Match: W9RMH3_9ROSA (Uncharacterized protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9RMH3_9ROSA)

HSP 1 Score: 54.7 bits (130), Expect = 1.260e-6
Identity = 37/90 (41.11%), Postives = 47/90 (52.22%), Query Frame = 0
Query:    2 YQTLSPSRCRRA--GRHITVVGDSTERFVYYALLRSL---GEATPNAHNTSIEKHSDFSWKASDDSGTRFDFLWAPFAQNLTDRVRGGRR 86
            +QTLS S       G  I V GDS  RFV  +LLR L     +  +A     ++HSD+     +  G R DF+WAP+A NLTD V   RR
Sbjct:  118 FQTLSRSDASDLLNGSWIVVAGDSQARFVALSLLRLLLADSNSFDSAKVDLFKRHSDYQTLIPE-IGARLDFVWAPYADNLTDLVAAFRR 206          
BLAST of mRNA_H-elongata_contig49540.12144.1 vs. uniprot
Match: A0A7S0IB15_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IB15_MICPS)

HSP 1 Score: 53.9 bits (128), Expect = 2.400e-6
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   13 AGRHITVVGDSTERFVYYALLRSLGEATPNAHNTSIEKHSDFSWKASDDSGTRFDFLWAPFAQNLTDRVR 82
            AG  + VVGDS  R VY A+LR + +        + +KH D++   + D G    F WAPFAQN+T RVR
Sbjct:  144 AGETVAVVGDSAARMVYAAILRLVAKDPDAWRLDASQKHRDWTHPLAAD-GAVAKFAWAPFAQNVTSRVR 212          
BLAST of mRNA_H-elongata_contig49540.12144.1 vs. uniprot
Match: C1EA12_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EA12_MICCC)

HSP 1 Score: 53.9 bits (128), Expect = 2.410e-6
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   13 AGRHITVVGDSTERFVYYALLRSLGEATPNAHNTSIEKHSDFSWKASDDSGTRFDFLWAPFAQNLTDRVR 82
            AG  + VVGDS  R VY A+LR   +        + +KH D++ + + D G    F WAPFAQN+T R+R
Sbjct:  147 AGETVAVVGDSAARMVYAAILRLAAKDADAWRLDTSQKHRDWTHQLASD-GAVATFAWAPFAQNVTSRLR 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49540.12144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LDR2_ECTSI8.590e-2665.82Cas1_AcylT domain-containing protein n=2 Tax=Ectoc... [more]
A0A835YWF0_9STRA2.980e-1546.2510 TM acyl transferase domain found in Cas1p-domai... [more]
W9RMH3_9ROSA1.260e-641.11Uncharacterized protein n=1 Tax=Morus notabilis Ta... [more]
A0A7S0IB15_MICPS2.400e-642.86Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C1EA12_MICCC2.410e-641.43Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49540contigH-elongata_contig49540:76..354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49540.12144.1mRNA_H-elongata_contig49540.12144.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49540 76..354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49540.12144.1 ID=prot_H-elongata_contig49540.12144.1|Name=mRNA_H-elongata_contig49540.12144.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MYQTLSPSRCRRAGRHITVVGDSTERFVYYALLRSLGEATPNAHNTSIEK
HSDFSWKASDDSGTRFDFLWAPFAQNLTDRVRGGRRWGKNNF*
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