prot_H-elongata_contig4947.12134.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4947.12134.1
Unique Nameprot_H-elongata_contig4947.12134.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: D7FVV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV7_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.780e-27
Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGL-SAVGKPEK 89
            ++  FE L EV  +E +PDG+AETAEDLVSA V+NH D DYRLLVACCLVEVLRI+APDAPY +DQ LA   LI TQLRGL +A  KP +
Sbjct:   68 MRGVFEKLLEVSQDEEIPDGLAETAEDLVSASVMNHPDSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGLGTAATKPRE 157          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A0L0STY6_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0STY6_ALLM3)

HSP 1 Score: 80.5 bits (197), Expect = 1.500e-15
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLSAV 84
            LK  FE+L ++  +          A+DLV+  ++NH DR  R+LVACCL E+LRIYAPDAPYE+DQ  AIF L   Q+R +  V
Sbjct:   33 LKTLFENLADLRQDTTDASSCNHVAKDLVAPSLLNHRDRGVRILVACCLAEILRIYAPDAPYEDDQIKAIFELFALQMRAIGNV 116          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A836C8V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8V2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.990e-15
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   18 PDGIAETAEDLVSAKVINHLDR------DYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLS 82
            PDG+ ETA DL S ++++H DR      D R LVACCLV++LR+YAP APY+ ++  +IF L+T QLRGLS
Sbjct:   42 PDGLRETAADLASPELLSHKDRQGFTIMDVRQLVACCLVDILRVYAPQAPYKPEELQSIFALLTQQLRGLS 112          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A0L0S4E9_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S4E9_ALLM3)

HSP 1 Score: 79.0 bits (193), Expect = 5.390e-15
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLSAV 84
            LK  FE L ++  +          A++LV+  ++NH DR  R+LVACCL E+LRIYAPDAPYE+DQ  AIF L   QLR +  V
Sbjct:   33 LKTLFEKLVDLRQDTADASSCNHVAKELVTPSLLNHRDRGVRILVACCLAEILRIYAPDAPYEDDQIKAIFELFALQLRAIGNV 116          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A433PI28_9FUNG (Armadillo-type protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI28_9FUNG)

HSP 1 Score: 71.6 bits (174), Expect = 2.000e-12
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLSAVGKPE 88
            LK+   +L+++D E+   D +A+  +DLV+  +  H D+  R LVACC+ ++LR+YAPDAPY + +   IF  I  QL+ LS    P 
Sbjct:   37 LKQLHAELQKMDQEDVDTDSLADVTKDLVNPTLREHSDKGVRALVACCIADLLRLYAPDAPYNDRELREIFEFIILQLQNLSHTNSPH 124          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A0L0GDN5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GDN5_9EUKA)

HSP 1 Score: 70.5 bits (171), Expect = 5.130e-12
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLS 82
            LK    DL++    E +   IA  AE LV   ++ H D+D ++ VACCL EVLR+YAP  PY ++  +A+F    +QLRGL+
Sbjct:  132 LKALLVDLQKQKQHETVSSEIAHFAETLVDTSLLKHKDKDVKIYVACCLAEVLRLYAPQTPYNDEVLVAVFRFFISQLRGLA 213          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: UPI0013905A82 (sister chromatid cohesion protein PDS5 homolog B n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013905A82)

HSP 1 Score: 70.1 bits (170), Expect = 7.010e-12
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGL 81
            LK   E+L E +       G  +TAE L    V+ H D+  RL  ACCLV++LRIYAP+AP+ +DQ   +F LI +QLRGL
Sbjct:   35 LKALAEELSEAEQSSAKQYG--DTAEFLARHYVLKHKDKGVRLYAACCLVDILRIYAPEAPFNQDQMWEVFSLIISQLRGL 113          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A7M5URH2_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5URH2_9CNID)

HSP 1 Score: 68.9 bits (167), Expect = 1.770e-11
Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLSAVGKP 87
            LK A + LR VD  E   D    TA  + S  + +H D+D +   ACC  ++LRIYAP+ PY EDQ   IF LI +QL+GL  V  P
Sbjct:   30 LKNAAQGLRNVDQGEQTEDFDGFTAS-VASPFIFHHKDKDVKSFAACCFADILRIYAPEPPYNEDQLKDIFHLIISQLKGLENVNAP 115          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A7RFN5_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RFN5_NEMVE)

HSP 1 Score: 68.6 bits (166), Expect = 2.370e-11
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0
Query:   23 ETAEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGL 81
            +TAE L    V+ H D+  RL  ACCLV++LRIYAP+AP+ +DQ   +F LI +QLRGL
Sbjct:   22 DTAEFLARHYVLKHKDKGVRLYAACCLVDILRIYAPEAPFNQDQMWEVFSLIISQLRGL 80          
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Match: A0A1Y2HXM6_9FUNG (Uncharacterized protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HXM6_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 3.310e-11
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   25 AEDLVSAKVINHLDRDYRLLVACCLVEVLRIYAPDAPYEEDQHLAIFGLITTQLRGLS 82
            A+DL+ A V++H DR  ++LVACCL E+LR+YAP+APY++DQ   IF L   Q + L+
Sbjct:  138 AQDLIHASVLHHRDRGVKILVACCLSEILRLYAPEAPYDDDQLKDIFDLFANQFQHLN 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4947.12134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV7_ECTSI2.780e-2766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0L0STY6_ALLM31.500e-1548.81Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A836C8V2_9STRA3.990e-1554.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0L0S4E9_ALLM35.390e-1548.81Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A433PI28_9FUNG2.000e-1239.77Armadillo-type protein n=1 Tax=Endogone sp. FLAS-F... [more]
A0A0L0GDN5_9EUKA5.130e-1242.68Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
UPI0013905A827.010e-1246.91sister chromatid cohesion protein PDS5 homolog B n... [more]
A0A7M5URH2_9CNID1.770e-1144.83Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A7RFN5_NEMVE2.370e-1154.24Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A1Y2HXM6_9FUNG3.310e-1151.72Uncharacterized protein n=1 Tax=Catenaria anguillu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039776Sister chromatid cohesion protein Pds5PANTHERPTHR12663ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATEDcoord: 1..84
NoneNo IPR availablePANTHERPTHR12663:SF0PDS5, ISOFORM Acoord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4947contigH-elongata_contig4947:4537..5884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4947.12134.1mRNA_H-elongata_contig4947.12134.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4947 4537..5884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4947.12134.1 ID=prot_H-elongata_contig4947.12134.1|Name=mRNA_H-elongata_contig4947.12134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
LKEAFEDLREVDPEEGMPDGIAETAEDLVSAKVINHLDRDYRLLVACCLV
EVLRIYAPDAPYEEDQHLAIFGLITTQLRGLSAVGKPEKLDLRGVRPPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039776Pds5