prot_H-elongata_contig49387.12127.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49387.12127.1
Unique Nameprot_H-elongata_contig49387.12127.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length253
Homology
BLAST of mRNA_H-elongata_contig49387.12127.1 vs. uniprot
Match: D7FIC1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC1_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 5.550e-60
Identity = 126/258 (48.84%), Postives = 159/258 (61.63%), Query Frame = 0
Query:    1 VGCLHGSRASGRDVKEVLDRVRPGVVVLELCESRHRSLRRDVERGKKEGESPSKIHEVLLKETKGWAKGVRGTMKRDGLAQGMLAALLSAPYMLQRLGDFDPGLEFKTAMAYADATARLQATPEENSSQFPRGVEAPTSVEGGG--ECALVMGDRDVNETLRRIGGGGIFTAPESDSVENDPITKTKDIRRKKDDASSGESSENAPGFSVGRSDGVVRGLLPSDW---MMVSDARVLRMAVVGPQGSEWPDSLNVFDT 253
            VGCLHGS ASGRDV++VL++VRPG VVLELCESRH++LRRD+E+  K G++P +  E        WAKGV+ T  + GL QG+L+ LLSAPY++QRLGDFDPGLEFKTAM YAD + R        S+   RG+ +P +  G G  EC++V+GDRDV ETLRR+  GG  TA        D   +   +                 G SVG  D        S W    + SDAR++R+AVVGP G +WPDSLNV DT
Sbjct:  121 VGCLHGSHASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKRAK-GDAPLEGKERWASAFSSWAKGVKKTSAKSGLVQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGY-----STGVARGMVSPAAGGGAGPGECSVVLGDRDVQETLRRL--GGALTALTGRGEGGD---EKHGVGXXXXXXXXXXXXXXGGGVSVGTLD-AAETEATSGWNWGTLASDARIVRVAVVGPSGRQWPDSLNVLDT 366          
BLAST of mRNA_H-elongata_contig49387.12127.1 vs. uniprot
Match: A0A835YJK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJK9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.010e-30
Identity = 93/253 (36.76%), Postives = 131/253 (51.78%), Query Frame = 0
Query:    4 LHGSRASGRDVKEVLDRVRPGVVVLELCESRHRSLRRDV--ERGKKEGESPSKIHEVLLKETKGWAKGVRGTMKRDGLAQGMLAALLSAPYMLQRLGDFDPGLEFKTAMAYADATARLQATPEENSSQFPRGVEAPTSVEGGGECALVMGDRDVNETLRRIGG----GGIFTAPESDSVENDPITKTKDIRRKKDDASSGESSENAPGFSVGRSDGVVRGLLPSDWMMVSDARVLRMAVVGPQGSEWPDSLNV 250
            + GS  S RDV+ V++   PG VVLELCESR ++L R++  E+  KE     +IH VL     GW +G++ T ++ GL Q + A L+S+ Y+ Q+L +FDPG EFKTAMA ++A                RG++            +V+GDRD+NETL R+ G    G      + ++    P+ K K  +R                +SV RS   VRGL         DARVLR+AV G  G +WP +LNV
Sbjct:    1 MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVERIHAVLG----GWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSNA----------------RGID------------IVLGDRDINETLGRLNGKNKQGKRAPKLQPNAPPPPPLLKAK--KR----------------WSVDRSLAYVRGL-------GRDARVLRLAVAGESGQQWPAALNV 196          
BLAST of mRNA_H-elongata_contig49387.12127.1 vs. uniprot
Match: A0A090M7F3_OSTTA (Pheromone shutdown, TraB n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M7F3_OSTTA)

HSP 1 Score: 66.6 bits (161), Expect = 3.220e-9
Identity = 53/166 (31.93%), Postives = 76/166 (45.78%), Query Frame = 0
Query:    1 VGCLHGSRASGRDVKEVLDRVRPGVVVLELCESRHRSLRRDV---ERGKKEGES-PSKIHEVLLKETKGWAKGVRGTMKRDGLAQGMLAALLSAPYMLQRLGDFDPGLEFKTAMAYADATARLQATPEENSSQFPRGVEAPTSVEGGGECALVMGDRDVNETLRRI 162
            VG  H S  S ++V E++ RVRP VV +ELC+ R  ++R  +    RG+K+GE   S+     +++  G   G RG      +A G+L A +   Y   RL   +PG EFK A+  A+A                                +V  DRDV ETLRR+
Sbjct:   50 VGTAHVSEKSAQEVAELVRRVRPTVVAVELCDERLATMRETIAKERRGEKKGEGGTSEFVRRAVRDFFGAFTGARGP---GNVADGLLGAAMKTFYGFFRLSGLEPGKEFKEAVKEAEALG----------------------------AQVVCADRDVRETLRRL 184          
BLAST of mRNA_H-elongata_contig49387.12127.1 vs. uniprot
Match: A0A2A6CBG2_PRIPA (Peptidase n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6CBG2_PRIPA)

HSP 1 Score: 54.7 bits (130), Expect = 6.940e-5
Identity = 54/165 (32.73%), Postives = 78/165 (47.27%), Query Frame = 0
Query:    1 VGCLHGSRASGRDVKEVLDRVRPGVVVLELCESRHRSLRRDVERGKKEGESPSKIHEVLLKETKGW--AKGVRGTMKRDGLAQGMLAALL--SAPYMLQRLGDFDPGLEFKTAMAYADATARLQATPEENSSQFPRGVEAPTSVEGGGECALVMGDRDVNETLRR 161
            VG  H S+ S  DVK+V+DRV+P VV++ELC SR   L  D               E L +E K    AK ++  MKR G   G++  LL   + ++ ++LG   PG EF+ A   A+   R +   E  +S+ P              C  V+GDR +  T+ R
Sbjct:  131 VGTAHFSKNSQEDVKKVIDRVQPDVVMVELCPSRISVLSLD--------------EETLFREAKDLTTAKMIQ-LMKRGGPLHGVMYTLLISMSAHVTRQLG-MAPGGEFRMAYKAANQVWR-RGWIENWTSEIPL-------------CHFVLGDRPIEITIGR 265          
BLAST of mRNA_H-elongata_contig49387.12127.1 vs. uniprot
Match: UPI001F886857 (Uncharacterized protein n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F886857)

HSP 1 Score: 53.9 bits (128), Expect = 9.700e-5
Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0
Query:    1 VGCLHGSRASGRDVKEVLDRVRPGVVVLELCESRHRSLRRDVERGKKEGESPSKIHEVLLKETKGWA-KGVRGTMKRDGLAQGML-AALLSAPYMLQRLGDFDPGLEFKTAMAYADATARLQATPEENSSQFPRGVEAPTSVEGGGECALVMGDRDVNETLRR 161
            VG  H S+ S RDV+ V+ + RP VVVLELC SR   L            S S++   ++KE K    + +R  MK+ GL Q  +   LLSA   +    D  PG EF+ A                    F   ++ P        C +++GDR ++ TLRR
Sbjct:  151 VGTSHFSKPSHRDVRRVIRKFRPQVVVLELCRSRMCFL------------SMSEME--IMKEAKSLNFRKIRDYMKKHGLLQTFIYTLLLSASARVTNDLDIAPGGEFRNA--------------------FNEALKIPG-------CVVMLGDRPIDITLRR 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49387.12127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIC1_ECTSI5.550e-6048.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJK9_9STRA1.010e-3036.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A090M7F3_OSTTA3.220e-931.93Pheromone shutdown, TraB n=1 Tax=Ostreococcus taur... [more]
A0A2A6CBG2_PRIPA6.940e-532.73Peptidase n=2 Tax=Pristionchus pacificus TaxID=541... [more]
UPI001F8868579.700e-531.90Uncharacterized protein n=1 Tax=Dermatophagoides f... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21530PHEROMONE SHUTDOWN PROTEINcoord: 1..114
NoneNo IPR availablePANTHERPTHR21530:SF5coord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49387contigH-elongata_contig49387:1618..3983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49387.12127.1mRNA_H-elongata_contig49387.12127.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49387 1618..3983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49387.12127.1 ID=prot_H-elongata_contig49387.12127.1|Name=mRNA_H-elongata_contig49387.12127.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
VGCLHGSRASGRDVKEVLDRVRPGVVVLELCESRHRSLRRDVERGKKEGE
SPSKIHEVLLKETKGWAKGVRGTMKRDGLAQGMLAALLSAPYMLQRLGDF
DPGLEFKTAMAYADATARLQATPEENSSQFPRGVEAPTSVEGGGECALVM
GDRDVNETLRRIGGGGIFTAPESDSVENDPITKTKDIRRKKDDASSGESS
ENAPGFSVGRSDGVVRGLLPSDWMMVSDARVLRMAVVGPQGSEWPDSLNV
FDT
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