prot_H-elongata_contig49263.12110.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49263.12110.1
Unique Nameprot_H-elongata_contig49263.12110.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length219
Homology
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 9.190e-54
Identity = 101/235 (42.98%), Postives = 141/235 (60.00%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPGA+ + ++D + V LPP L+ ++ AI  VT W+Q+ L  + I L+  K + L   GF    LT +++  +  TGL+VA  GM +VGVPVGTE FQR  +     G PAEL+R L  ++D Q+S+Q+LRLS   RL +LLRT+ PSIT  AA  +D L+ W ++ IV G  A  +G+PT +E                A  Q HLPIREGGLG+ SS  IR +A+
Sbjct:   34 MKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 268          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.210e-50
Identity = 95/236 (40.25%), Postives = 140/236 (59.32%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE-----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPG + + ++D +   LPP L+ +M AI  VT W+QERL  + I L+  K + L   G     LT +++  +   GL+VA  GM VVG+P GTE+FQR+ + K   G+PAEL+  L  ++D Q+S+Q+LRLS   RL +LLRT+ PSIT  AA  +D ++ W ++ IV G  A ++ +PT +E                 A  Q HLP+REGGLG+ S+  IR +A+
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 9.620e-50
Identity = 100/235 (42.55%), Postives = 140/235 (59.57%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPGA+ + ++D + V LPP L+ ++ AI  VT W+Q+ L  + I L+  K + L   G     LT +++  +  TGL+VA  GM +VGVPVGTE FQR  +     G PAEL+R L  ++D Q+S+Q+LRLS   RL +LLRT+ PSIT  AA  +D L+ W ++ IV G  A  +G+PT +E                A  Q HLPIREGGLG+ SS  IR +A+
Sbjct:  335 MKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 569          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.250e-49
Identity = 98/235 (41.70%), Postives = 137/235 (58.30%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPGA+ + ++D + V LPP L+ ++ AI  VT W+Q+ L  + I L+  K + L   G     LT +++  +  TGL+VA  GM +VGVPVGTE FQR  +     G PAEL+R L  ++D Q+S+Q+LRLS   RL +LLRT  PSIT  AA  +D L+ W ++ IV G  A  +G+PT +E                A  Q HLPIREGGL +  S  IR +A+
Sbjct:    1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAF 235          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 3.890e-49
Identity = 98/235 (41.70%), Postives = 139/235 (59.15%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPGA+ + ++D + V LPP L+ ++ AI  VT W+Q+ L  + I L+  K   L   G     LT +++  +  TGL+VA  GM +VGVPVGTE FQR  +     G PAEL+  L  ++D Q+S+Q+LR+S   RL +LLRT+ PSIT  AA  +D+L+ W ++ IV G  A  +G+PT +E                A  Q HLPIREGGLG+ SS  IR +A+
Sbjct:  183 MKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 417          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.970e-47
Identity = 96/236 (40.68%), Postives = 141/236 (59.75%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE-----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPG + + ++D +   LPP L+ +M AI  VT W+QERL  + I L+  K + L   G     LT +++  +   GL+VA  GM VVG+PVGTE+FQR+ + K   G+PAEL+  L  ++D Q+S+Q+LRLS   RL +LLRT+ PSIT  AA  +D ++ W ++ IV G  A ++ +PT +E                 A  Q HLP+REGGLG+ S+  IR +A+
Sbjct:  335 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.020e-47
Identity = 96/236 (40.68%), Postives = 141/236 (59.75%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE-----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPG + + ++D +   LPP L+ +M AI  VT W+QERL  + I L+  K + L   G     LT +++  +   GL+VA  GM VVG+PVGTE+FQR+ + K   G+PAEL+  L  ++D Q+S+Q+LRLS   RL +LLRT+ PSIT  AA  +D ++ W ++ IV G  A ++ +PT +E                 A  Q HLP+REGGLG+ S+  IR +A+
Sbjct:  183 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 418          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 3.360e-47
Identity = 96/236 (40.68%), Postives = 140/236 (59.32%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE-----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPG + + ++D +   LPP L+ +M AI  VT W+QERL  + I L+  K + L   G     LT +++  +   GL+VA  GM VVG+PVGTE+FQR+ + K   G+PAEL+  L  ++D Q+S+Q+LRLS   RL  LLRT+ PSIT  AA  +D ++ W ++ IV G  A ++ +PT +E                 A  Q HLP+REGGLG+ S+  IR +A+
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 4.520e-47
Identity = 95/236 (40.25%), Postives = 140/236 (59.32%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQE-----------------ALRQTHLPIREGGLGLPSSSSIRGAAY 219
            ++EF    PVPG + + ++D +   LPP L+ +M AI  VT W+QERL  + I L+  K + L   G     LT +++  +   GL+V   GM VVG+PVGTE+FQR+ + K   G+PAEL+  L  ++D Q+S+Q+LRLS   RL +LLRT+ PSIT  AA  +D ++ W ++ IV G  A ++ +PT +E                 A  Q HLP+REGGLG+ S+  IR +A+
Sbjct:  335 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 163 bits (412), Expect = 1.450e-42
Identity = 93/234 (39.74%), Postives = 139/234 (59.40%), Query Frame = 0
Query:    1 LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRVEDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPVGTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWTLASIVAGD---GATAIGLPTPQEA------------LRQTHLPIREGGLGLPSSSSIRGAAY 219
            LR+FRAN PV GA+ ++FID + V+LP   + + AA   VT W+Q  ++   ++LNR K + L   G   +   E+ R T++ T L VA  GMR+VGVPVG   + +        GEP +L++ +  ++D Q+S QILR SA +RL++LLR++PP +T +AA+ +D  VE TL +I+ G    G  A   PT + +            +RQ  LP+REGGLG+PS+  I G A+
Sbjct: 1370 LRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAF 1603          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49263.12110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K541_9PHAE9.190e-5442.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE1.210e-5040.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGJ4_9PHAE9.620e-5042.55Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JL76_9PHAE1.250e-4941.70Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSY9_9PHAE3.890e-4941.70Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE1.970e-4740.68Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE2.020e-4740.68Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKJ7_9PHAE3.360e-4740.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM0_9PHAE4.520e-4740.25Reverse transcriptase domain-containing protein (F... [more]
A0A6P0N5L4_9CYAN1.450e-4239.74Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49263contigH-elongata_contig49263:1579..2286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49263.12110.1mRNA_H-elongata_contig49263.12110.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49263 1579..2286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49263.12110.1 ID=prot_H-elongata_contig49263.12110.1|Name=mRNA_H-elongata_contig49263.12110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
LREFRANLPVPGARAVSFIDYITVILPPELSLDMAAIGKVTEWLQERLRV
EDISLNRRKLQALLAYGFGPEQLTEEQRVTMDTTGLTVARQGMRVVGVPV
GTEQFQRDLLQKAVNGEPAELVRALVPMEDVQSSFQILRLSATSRLSYLL
RTVPPSITCQAAANYDALVEWTLASIVAGDGATAIGLPTPQEALRQTHLP
IREGGLGLPSSSSIRGAAY
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