prot_H-elongata_contig49219.12107.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig49219.12107.1 vs. uniprot
Match: A0A6H5L2L7_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L7_9PHAE) HSP 1 Score: 214 bits (546), Expect = 6.780e-58 Identity = 188/557 (33.75%), Postives = 246/557 (44.17%), Query Frame = 0
Query: 179 GSGGEPGVVPCSAAVIDGGSLRIDQAKWAGFAIDQSESVLIAVDSLISEVDERNRALLAGDLESRALQVTAWRTCTIQTTDRKGFLTPGVQPR----LELPPERPLTPTSGDTDMDAVVPETLVRLVRECCLSARCSSGDSNAPCAGGVEGV--STNFGFGQQCASELLGKFLDLGAS---------------RVDGKVHSTTTRLSEGFRGSVCTRTLCVECERDRVDRDTFMELVLPPHLPRPSDSNHKP-----HEPPAARSTSSPE----SITLAELVEATLGSESLVGNNKLWCRFCRQQTEAERRSTLHCCPRLLAIHLRPEVDGMS---IGRAESAWTSALGPHKVV----RGG-GNCCARGGSALIERVMTIQGIAKCQFH----DAMRDRAAASHTDYAHGVTGDEPRSKRKGVFQLPNPEPSGEVVYDLVGIILHQGRSLRSGHYTF-VRHVIQDRVPGGSKNITDAGTLRHRVMKAEKTQSCSFQAFQGQDVQEKDQSLLPLDGNLVIFDDASVRWLSPEEERFILNCGGSPRGFGDAFLVFYMRR 692
GS G P + A G +L A Q VL+A++ ++ E++ RNRAL L + Q ++T T + + + P RP T ++++ P +LV L+ LSA A GG G ST+FG GQ C SELLGKFL L R G S+ L++ FRG++C RTLCVECERDR R+ F EL LPP LP H P PAA + P T+ L++ ESL GNNK+WC CRQ TEAERRS++H P LLA+H+RP S + A S P VV RG G A IER + ++ A+CQFH ++ TG QL + SG++ YDL+G ILHQG++L SGHYTF + D ++ R +A Q G + D +FDDA+VRWLS EEER +L G GFGD FLVFY RR
Sbjct: 20 GSEGVSSTPPAADAAPAGAALAGTAAPVGRETGTQRNPVLVALEQVLGEMETRNRALFQQQLVAAGSQTAVSPPAEPESTSSGA--TSSAESKTCQWFDQTPLRPSASTGEGVRVESIAPTSLVELIHGGWLSA------DRARLGGGGAGTTGSTDFGTGQACVSELLGKFLGLVVDDXXXXXXXXXXXXXXRSGGTHSSSFCGLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLP----PQHAPPLTAQRAIPAAENDGGPSLRGRHRTIQTLIDGVFERESLAGNNKVWCEACRQWTEAERRSSVHSPPGLLALHVRPGTRKRSSPCLYPKALARASGGAPDSVVGDVRRGADGRLPAGSREEAIERTLVVRKAARCQFHGGGVNSXXXXXXXXXXXSVDSCTG-----------QLCD---SGDIFYDLIGAILHQGQTLASGHYTFAINAAAGDWASFLAQQXXXXXXXADRDNRALVQQGPPGATAAGSTYGKPD---------FALFDDATVRWLSLEEERAVLRGDGG--GFGDPFLVFYARR 539
BLAST of mRNA_H-elongata_contig49219.12107.1 vs. uniprot
Match: D7FM48_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM48_ECTSI) HSP 1 Score: 170 bits (430), Expect = 1.440e-41 Identity = 184/646 (28.48%), Postives = 230/646 (35.60%), Query Frame = 0
Query: 92 VSQLEVTSGGAAAPLRYLSSSPQT--SPPFVGLANLGETCYINVVVQALVACSRAMKLSTERSRACDAERVAERDIIYRESVLAAASPHGSGGEPGVVPCSAAVIDGGSLRIDQAKWAGFAIDQSESVLIAVDSLISEVDERNRALLAGDLESRALQVTAWRTCTIQTTDRKGFLTPG---VQPRLELPPERPLTPTSGDTDMDAVVPETLVRLVRECCLSA-RCSSGDSNAPCAGGVEGVSTNFGFGQQCASELLGKFLDL---------------GASRVDGKVHSTTTRLSEGFRGSVCTRTLCVECERDRVDRDTFMELVLPPHLPRPSDSNHKPHEPP--------AARSTSSPE----SITLAELVEATLGSESLVGNNKLWCRFCRQQTEAERRSTLHCCPRLLAIHLRPEVDGMSIGRAESAWTSALGPHKVVRGGGNCCARGGSALIERVMTIQGIAKCQFHDAMRDRAAASHTDYAHGVTGDEPRSKRKGVFQLPNPEPSGEVVYDLVGIILHQGRSLRSGHYTFVRHVIQDRVPGGSKNITDAGTLRHRVMKAEKT------------QSCSFQAFQGQDVQEKDQSLLPLDGNLVIFDDASVRWLSPEEERFILNCGGSPRGFGDAFLVFYMRR 692
+S+ + G AP + P + SPPFVGL NLGETCY+N V+QAL AC L++ R V GS G P + A G + AG Q VL A++ ++ E++ RNRAL L + Q ++T +P QP + P RP T ++A+ P LV L+R LSA R G A G ST FG GQ C SELLGKFL L G R G S+ L++ FRG++C RTLCVECERDR R+ F EL LPP LP P H PP AA + P T+ LV+ ESL GNNKL C SG+V YDL+G+ILHQG++L SGHYTF H G S + + +C F +FDDA+V WLSPEEER +L GG FGD FLVFY RR
Sbjct: 108 LSETCLDRAGVLAPAAWTIERPSSGPSPPFVGLKNLGETCYVNAVLQALTACHGV--LTSSRGGGGGWHDVGS---------------EGSEGSCSTPPAADAAPAGAASEGTAVLVAGVTGTQRNPVLAALEQVLGEMETRNRALSQQQLVAFGSQTAVSSPAEPESTGSGATSSPESKTCQP-YDQTPLRPSASTGEGVLVEAIAPTFLVELIRGGWLSADRSRLGGGGAGATG-----STEFGTGQACVSELLGKFLGLVVDDGGSGATSLGGVGGRRSGGSHSSSFCCLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPPQ------HAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFEGESLAGNNKL--------------------------------------------------------------------------------CD----------------------------------------SGDVFYDLIGVILHQGQTLASGHYTFALHA----AAGDSASFLEXXXXXXXXXXXXXXXXXXXXXXXXXGSTCGKPGF-------------------ALFDDATVGWLSPEEERAVLRGGGGV--FGDPFLVFYARR 579 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49219.12107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig49219.12107.1 ID=prot_H-elongata_contig49219.12107.1|Name=mRNA_H-elongata_contig49219.12107.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=695bpback to top |