prot_H-elongata_contig49172.12097.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49172.12097.1
Unique Nameprot_H-elongata_contig49172.12097.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: D8LQF2_ECTSI (GTR1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF2_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 4.150e-55
Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 0
Query:    1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQPGELGHHQ 113
            GADEVVLFER TFLVIAH   VQH D+HRFEKISNIVKQFKLSVSKTS +F GMMVKNS FT FISDFT NTYIMVVTTSPLVEKATTELNI AA+KHFERLL++P +LGHH+
Sbjct:  195 GADEVVLFERETFLVIAHAKHVQHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMVKNSNFTVFISDFTENTYIMVVTTSPLVEKATTELNIKAAKKHFERLLVKPEDLGHHE 307          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A835Z771_9STRA (Putative ras-related GTP binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z771_9STRA)

HSP 1 Score: 143 bits (361), Expect = 7.970e-40
Identity = 72/104 (69.23%), Postives = 85/104 (81.73%), Query Frame = 0
Query:    2 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 105
            ADEVVLFERATFLVI+H  + QH D HRFEKISNI+KQFKLSVSKT  +F+GM V+NS FTAFI  FT NTYIMVV + P ++ ATT+LNI AAR+HFE+ + Q
Sbjct:  196 ADEVVLFERATFLVISHALQAQHYDAHRFEKISNIIKQFKLSVSKTQAQFQGMEVRNSSFTAFIDSFTANTYIMVVLSDPKIQSATTQLNIRAARRHFEKFVPQ 299          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A485KRM6_9STRA (Aste57867_10915 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRM6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.700e-37
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 0
Query:    1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 105
             ADEVVLFERATFLVIAH T   H DIHRFEKISNI+KQFKLS SKT  +F+GM V+NS FTAF+  FT+NTYIMV+ +   ++ ATT+LNI AAR  FER + Q
Sbjct:   71 NADEVVLFERATFLVIAHATHKNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAFMDFFTSNTYIMVIMSDDEIQPATTQLNIKAARPVFERYVQQ 175          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A067CTB0_SAPPC (Ras-like GTP-binding protein A n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTB0_SAPPC)

HSP 1 Score: 130 bits (328), Expect = 6.470e-35
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 0
Query:    1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 105
             ADEVVLFERATFLVIA+ T   H D+HRFEKISNI+KQFKLS SKT  +F+GM V+NS FTA++  FTTNTYIMV+ +   ++ ATT+LNI AAR  FER + Q
Sbjct:  194 NADEVVLFERATFLVIANATHTTHRDMHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAYMDFFTTNTYIMVIMSDGSIQAATTQLNIKAARPVFERYVQQ 298          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A1Y1XDS2_9FUNG (GTP-binding protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1XDS2_9FUNG)

HSP 1 Score: 130 bits (328), Expect = 6.760e-35
Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    2 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERL 102
            ADE+VLFERATFLVI+H T+  H DIHRFEKISNI+KQFKLS SK+   F+ M VKNS FTAFI   T NTYIMV+ + P ++ A T +NIN ARKHFE++
Sbjct:  195 ADEIVLFERATFLVISHSTKKPHYDIHRFEKISNIIKQFKLSCSKSQTLFQSMEVKNSNFTAFIDVLTPNTYIMVIMSDPTIQSAATAININVARKHFEKI 295          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A4P9W412_9FUNG (GTP-binding protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W412_9FUNG)

HSP 1 Score: 127 bits (318), Expect = 6.980e-35
Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    2 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERL 102
            ADEVVLFER TFLVI+H  + QH D+HRFEKISNIVKQFKLS SKT  +F+ M ++N +F AFI   T NTY+MV+ + P ++ A T +NI AAR HFE +
Sbjct:   61 ADEVVLFERTTFLVISHSNQTQHADVHRFEKISNIVKQFKLSCSKTQAQFQSMEIRNPLFAAFIDVLTPNTYVMVIMSDPTIQSAATLINIGAARSHFENI 161          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: D0MTF8_PHYIT (Ras-related GTP-binding protein, putative n=11 Tax=Peronosporaceae TaxID=4777 RepID=D0MTF8_PHYIT)

HSP 1 Score: 128 bits (322), Expect = 2.500e-34
Identity = 67/105 (63.81%), Postives = 78/105 (74.29%), Query Frame = 0
Query:    1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 105
             ADEVVLFERATFLVI+H T   H DIHRFEKISNI+KQFKLS SKT  +F+GM V+NS FTAFI  FT NTYIM++ +   ++ AT  LNI AAR  FE  + Q
Sbjct:  163 SADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAFIDFFTANTYIMIIMSDDSIQPATIHLNIKAARPVFEEHVQQ 267          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: M4BM95_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM95_HYAAE)

HSP 1 Score: 129 bits (324), Expect = 2.910e-34
Identity = 67/105 (63.81%), Postives = 79/105 (75.24%), Query Frame = 0
Query:    1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 105
             ADEVVLFERATFLVI+H T   H DIHRFEKISNI+KQFKLS SKT  +F+GM V+NS FTAFI  FT NTYIM++ +   ++ AT +LNI AAR  FE  + Q
Sbjct:  200 SADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAFIDFFTANTYIMIIMSDDSIQPATIQLNIKAARPVFEEHVQQ 304          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: H3GWU9_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3GWU9_PHYRM)

HSP 1 Score: 127 bits (320), Expect = 8.070e-34
Identity = 67/105 (63.81%), Postives = 78/105 (74.29%), Query Frame = 0
Query:    1 GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQ 105
             ADEVVLFERATFLVI+H T   H DIHRFEKISNI+KQFKLS SKT  +F+GM V+NS FTA+I  FT NTYIMV+ +   ++ AT  LNI AAR  FE  + Q
Sbjct:  184 SADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEVRNSNFTAYIDFFTANTYIMVIMSDDSIQPATIHLNIKAARPVFEEHVQQ 288          
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Match: A0A1X7URV8_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7URV8_AMPQE)

HSP 1 Score: 128 bits (321), Expect = 8.670e-34
Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 0
Query:    2 ADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHEFRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFERLLMQPGELG 110
            ADEV+LFERATFLVIAH  + QH DIHRFEKISNIVKQFKLS SK   +F+ M V+NS F+AFI  FT NTY+MV+ + P +  A T +N+  ARKHFE++    G  G
Sbjct:  195 ADEVLLFERATFLVIAHSVKRQHSDIHRFEKISNIVKQFKLSCSKLQAQFQSMEVRNSQFSAFIDVFTPNTYVMVIMSDPTIPSAVTLVNVKNARKHFEKIEKMEGGGG 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49172.12097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQF2_ECTSI4.150e-5583.19GTR1, Ras superfamily GTPase n=2 Tax=Ectocarpus Ta... [more]
A0A835Z771_9STRA7.970e-4069.23Putative ras-related GTP binding protein n=1 Tax=T... [more]
A0A485KRM6_9STRA1.700e-3766.67Aste57867_10915 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CTB0_SAPPC6.470e-3564.76Ras-like GTP-binding protein A n=12 Tax=Saprolegni... [more]
A0A1Y1XDS2_9FUNG6.760e-3565.35GTP-binding protein n=3 Tax=Neocallimastigaceae Ta... [more]
A0A4P9W412_9FUNG6.980e-3560.40GTP-binding protein (Fragment) n=1 Tax=Blyttiomyce... [more]
D0MTF8_PHYIT2.500e-3463.81Ras-related GTP-binding protein, putative n=11 Tax... [more]
M4BM95_HYAAE2.910e-3463.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
H3GWU9_PHYRM8.070e-3463.81Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]
A0A1X7URV8_AMPQE8.670e-3460.55Uncharacterized protein n=2 Tax=Amphimedon queensl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.190coord: 1..100
e-value: 1.1E-33
score: 117.7
NoneNo IPR availablePANTHERPTHR11259:SF4RAS-RELATED GTP-BINDING PROTEIN Bcoord: 2..102
IPR006762Gtr1/RagA G proteinPFAMPF04670Gtr1_RagAcoord: 2..37
e-value: 4.7E-7
score: 29.4
IPR006762Gtr1/RagA G proteinPANTHERPTHR11259RAS-RELATED GTP BINDING RAG/GTR YEASTcoord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49172contigH-elongata_contig49172:3125..3910 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49172.12097.1mRNA_H-elongata_contig49172.12097.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49172 3125..3910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49172.12097.1 ID=prot_H-elongata_contig49172.12097.1|Name=mRNA_H-elongata_contig49172.12097.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
GADEVVLFERATFLVIAHHTEVQHDDIHRFEKISNIVKQFKLSVSKTSHE
FRGMMVKNSIFTAFISDFTTNTYIMVVTTSPLVEKATTELNINAARKHFE
RLLMQPGELGHHQPRQVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006762Gtr1_RagA