prot_H-elongata_contig49107.12092.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49107.12092.1
Unique Nameprot_H-elongata_contig49107.12092.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length196
Homology
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: D8LL78_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL78_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 4.010e-109
Identity = 165/196 (84.18%), Postives = 180/196 (91.84%), Query Frame = 0
Query:    1 TRRAEGLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFPGG 196
            +RR EG+NDLVDFAVFPALQGGPHNHQIAALA AL+EAA P+FKSYI++VK NA+ALAAGLR  GHEVAT GTDNHLLLWDLRP+GLTGSKMEK+LEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDF +TVAGFLD AA LACA QERAGSKKL AFV E++ DEGV+ELK +VEAFA RFY+PGG
Sbjct:  337 SRRNEGINDLVDFAVFPALQGGPHNHQIAALAAALKEAASPDFKSYIKKVKTNAKALAAGLRARGHEVATDGTDNHLLLWDLRPRGLTGSKMEKLLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFRETVAGFLDRAACLACAVQERAGSKKLTAFVTEMDADEGVRELKGEVEAFAERFYYPGG 532          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A7S3F6F0_9EUKA (Glycine hydroxymethyltransferase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F6F0_9EUKA)

HSP 1 Score: 216 bits (550), Expect = 1.880e-68
Identity = 118/188 (62.77%), Postives = 137/188 (72.87%), Query Frame = 0
Query:    7 LNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFP 194
            L D ++ AVFPALQGGPHNHQI ALA ALREAA P FK YI  VK NAR LAA L   G+ + TGGTDNHL+LWDLRP+ LTGSKMEK+ EA  IS NKN + GDKSAA PGGVRLGTPAMTTRGL E+DFE+ VA  L +A  +A   QE +G K LAAF   +E D  V+ L+  V++F+  FY P
Sbjct:   10 LEDAINNAVFPALQGGPHNHQIGALAVALREAASPSFKEYICAVKGNARTLAAELMRRGYSICTGGTDNHLVLWDLRPQKLTGSKMEKLCEAVHISLNKNAIVGDKSAAVPGGVRLGTPAMTTRGLGESDFEE-VAELLHQAVQIALRLQEASGPK-LAAFAGLMEGDAEVEALRERVQSFSQGFYMP 195          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A7S0PCD4_CAFRO (Glycine hydroxymethyltransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S0PCD4_CAFRO)

HSP 1 Score: 215 bits (547), Expect = 8.470e-68
Identity = 110/192 (57.29%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    4 AEGLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFPG 195
            A G    ++FAVFP+LQGGPH HQIA +AT L+E    EFK+YIR+VKANARA+   L   G+ +ATGGTDNHLLLWDLRP+G+TGSK+EK+ +A  I+ NKN++YGD+SA SPGGVR+GTPA+TTRG  E DF + VA FL  +  +    Q  A SK+L  FV   + DE +  L++DV AFASRF  PG
Sbjct:    8 ARGFEPKINFAVFPSLQGGPHEHQIAGIATQLKEVMSDEFKAYIRQVKANARAIGEALVEHGYTLATGGTDNHLLLWDLRPQGITGSKIEKLCDAACITVNKNSVYGDRSAMSPGGVRIGTPALTTRGFTEADF-RAVADFLHRSVQIGLRMQAAAPSKRLDDFVKLFDGDEELATLRKDVNAFASRFAMPG 198          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A7S0J492_9EUKA (Glycine hydroxymethyltransferase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J492_9EUKA)

HSP 1 Score: 213 bits (543), Expect = 2.070e-66
Identity = 118/184 (64.13%), Postives = 138/184 (75.00%), Query Frame = 0
Query:   11 VDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFP 194
            V+FAVFP LQGGPHN+QIAALA ALREAA PEFK YI  VKANA+ALAA L   G+ + TGGTDNHL+LWDLRP  LTGSK EK+ +A  I+ NKN ++GD SAASPGGVRLGTPAM+TRGLDE DFE+ VA FL EA  L+ + Q R+G +KL  FVAEL     V  L++ V  F+ RF  P
Sbjct:   85 VNFAVFPCLQGGPHNNQIAALAVALREAATPEFKQYIAAVKANAQALAAALSARGYRIVTGGTDNHLVLWDLRPLRLTGSKFEKLCDAVGITLNKNAVFGDASAASPGGVRLGTPAMSTRGLDEADFEQ-VAEFLHEAIELSLSVQGRSG-RKLCDFVAELASTPEVALLRQRVRDFSVRFGMP 266          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: R1DZ60_EMIHU (Serine hydroxymethyltransferase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZ60_EMIHU)

HSP 1 Score: 218 bits (555), Expect = 1.160e-65
Identity = 116/188 (61.70%), Postives = 141/188 (75.00%), Query Frame = 0
Query:    7 LNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFP 194
                V+FAVFP LQGGPHNHQIAALA ALREA +P F+ YIRRVKANA+ALAA L   G+ + TGGTDNHL+LWDLRP+ LTGSK+EK+ EA  I+ NKN + GD SAA+PGGVR+GTPA+TTRG  E DF + VA +L EA  LA A Q+R+G+K L  FVAE+E +  V +L+  V AFA+ F  P
Sbjct:  296 FESAVNFAVFPCLQGGPHNHQIAALAVALREAQQPAFREYIRRVKANAKALAAALVARGYTIVTGGTDNHLVLWDLRPQRLTGSKLEKLAEAVGITLNKNAVRGDVSAATPGGVRIGTPALTTRGFGEADFVR-VAEYLHEAVELALALQQRSGTK-LKDFVAEMEAEPAVADLRERVRAFATEFPMP 481          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A7S2JPG5_9STRA (Glycine hydroxymethyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JPG5_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.750e-65
Identity = 115/201 (57.21%), Postives = 143/201 (71.14%), Query Frame = 0
Query:    2 RRAEGLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKK------LAAFVAELERDEGVKELKRDVEAFASRFYFPGG 196
            R  E L+ L+D AVFPALQGGPHN+QIAALA AL+EA   EF+ Y   V ANA++LA GL   GH +AT GTDNHLLLWDLR +G+TGS+MEK LE  SI+ANKN+L GD SA +PGGVRLGTPA+T+RG+  +DFEK VA FL  A  L   AQ+ A  K       +  FVA L   +G++ L+++VE F+S F+ PGG
Sbjct:   34 RNGEDLSKLIDSAVFPALQGGPHNNQIAALAVALKEAKSEEFRRYATDVIANAQSLAKGLMKRGHMIATDGTDNHLLLWDLRSRGITGSRMEKALEMVSITANKNSLAGDTSAINPGGVRLGTPALTSRGMRASDFEK-VAEFLHRAFELGLEAQQVAAEKSEGKKVMMKDFVAALSEMDGIEILRKEVEDFSSSFFMPGG 233          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: D2VIC8_NAEGR (Serine hydroxymethyltransferase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VIC8_NAEGR)

HSP 1 Score: 214 bits (546), Expect = 1.440e-64
Identity = 111/191 (58.12%), Postives = 142/191 (74.35%), Query Frame = 0
Query:    5 EGLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFPG 195
            + L   +DFAVFP +QGGPHNHQIAA+AT L+E   PEFK YI++VKANA+ LA  L   G+ +ATGGTDNHL+LW+LRP+G+TGSKMEK+ +A SI++NKN++ GD +A SP GVRLGTPA+TTRG  E DFEK VA FL     +    QE+A S KLA F+A  E +E + +LK +VE+FA +F  PG
Sbjct:  259 KALMPKIDFAVFPGIQGGPHNHQIAAIATQLKEVKTPEFKQYIQQVKANAKTLAKALIEKGYTLATGGTDNHLVLWNLRPQGITGSKMEKLFDAVSITSNKNSIAGDANALSPFGVRLGTPALTTRGFKEVDFEK-VAEFLHRGVQIGLKLQEQAVSTKLADFLALFENNEELTQLKSEVESFAKQFGIPG 448          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A5A8DGJ8_CAFRO (Serine hydroxymethyltransferase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGJ8_CAFRO)

HSP 1 Score: 215 bits (547), Expect = 1.640e-64
Identity = 110/192 (57.29%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    4 AEGLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFPG 195
            A G    ++FAVFP+LQGGPH HQIA +AT L+E    EFK+YIR+VKANARA+   L   G+ +ATGGTDNHLLLWDLRP+G+TGSK+EK+ +A  I+ NKN++YGD+SA SPGGVR+GTPA+TTRG  E DF + VA FL  +  +    Q  A SK+L  FV   + DE +  L++DV AFASRF  PG
Sbjct:  276 ARGFEPKINFAVFPSLQGGPHEHQIAGIATQLKEVMSDEFKAYIRQVKANARAIGEALVEHGYTLATGGTDNHLLLWDLRPQGITGSKIEKLCDAACITVNKNSVYGDRSAMSPGGVRIGTPALTTRGFTEADF-RAVADFLHRSVQIGLRMQAAAPSKRLDDFVKLFDGDEELATLRKDVNAFASRFAMPG 466          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A7S1NG76_9EUGL (Glycine hydroxymethyltransferase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NG76_9EUGL)

HSP 1 Score: 204 bits (520), Expect = 1.320e-63
Identity = 106/190 (55.79%), Postives = 138/190 (72.63%), Query Frame = 0
Query:    6 GLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFPG 195
            G  + ++FAVFP LQGGPH HQIA +AT L++ A PEFK Y  +VKANAR LA  +   G+++ +GGTDNHL+LWDLRP+GLTGSKMEK+LE CSIS NKNT+ GDKS+ SP G+R+GTPA+T+RG  E D  K VA F   A  +A   Q  +G K+L AFV  + + + +K ++ +VEAFAS+F  PG
Sbjct:   21 GFPEKINFAVFPGLQGGPHEHQIAGVATQLKKVASPEFKQYSIQVKANARTLAEHMMAHGYKLMSGGTDNHLILWDLRPQGLTGSKMEKILEECSISVNKNTVAGDKSSLSPSGIRIGTPALTSRGFVEKDM-KQVAEFYHRATQIAIKIQAESG-KQLKAFVEGMHKCDEIKVVRTEVEAFASQFPMPG 208          
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Match: A0A7S0J5B3_9EUKA (Serine hydroxymethyltransferase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5B3_9EUKA)

HSP 1 Score: 213 bits (543), Expect = 1.340e-63
Identity = 118/184 (64.13%), Postives = 138/184 (75.00%), Query Frame = 0
Query:   11 VDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRVKANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAASLACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFP 194
            V+FAVFP LQGGPHN+QIAALA ALREAA PEFK YI  VKANA+ALAA L   G+ + TGGTDNHL+LWDLRP  LTGSK EK+ +A  I+ NKN ++GD SAASPGGVRLGTPAM+TRGLDE DFE+ VA FL EA  L+ + Q R+G +KL  FVAEL     V  L++ V  F+ RF  P
Sbjct:  328 VNFAVFPCLQGGPHNNQIAALAVALREAATPEFKQYIAAVKANAQALAAALSARGYRIVTGGTDNHLVLWDLRPLRLTGSKFEKLCDAVGITLNKNAVFGDASAASPGGVRLGTPAMSTRGLDEADFEQ-VAEFLHEAIELSLSVQGRSG-RKLCDFVAELASTPEVALLRQRVRDFSVRFGMP 509          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49107.12092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL78_ECTSI4.010e-10984.18Serine hydroxymethyltransferase n=2 Tax=Ectocarpus... [more]
A0A7S3F6F0_9EUKA1.880e-6862.77Glycine hydroxymethyltransferase n=1 Tax=Haptolina... [more]
A0A7S0PCD4_CAFRO8.470e-6857.29Glycine hydroxymethyltransferase n=2 Tax=Sar TaxID... [more]
A0A7S0J492_9EUKA2.070e-6664.13Glycine hydroxymethyltransferase n=1 Tax=Calcidisc... [more]
R1DZ60_EMIHU1.160e-6561.70Serine hydroxymethyltransferase n=2 Tax=Emiliania ... [more]
A0A7S2JPG5_9STRA2.750e-6557.21Glycine hydroxymethyltransferase n=1 Tax=Leptocyli... [more]
D2VIC8_NAEGR1.440e-6458.12Serine hydroxymethyltransferase n=1 Tax=Naegleria ... [more]
A0A5A8DGJ8_CAFRO1.640e-6457.29Serine hydroxymethyltransferase n=2 Tax=Cafeteria ... [more]
A0A7S1NG76_9EUGL1.320e-6355.79Glycine hydroxymethyltransferase n=1 Tax=Eutreptie... [more]
A0A7S0J5B3_9EUKA1.340e-6364.13Serine hydroxymethyltransferase n=1 Tax=Calcidiscu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039429Serine hydroxymethyltransferase-like domainPFAMPF00464SHMTcoord: 5..140
e-value: 6.0E-51
score: 173.3
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 45..196
e-value: 1.9E-52
score: 179.2
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 1..44
e-value: 2.9E-13
score: 51.4
NoneNo IPR availablePANTHERPTHR11680:SF35SERINE HYDROXYMETHYLTRANSFERASE 1coord: 7..195
IPR001085Serine hydroxymethyltransferasePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 7..195
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 68..82
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 6..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49107contigH-elongata_contig49107:746..3974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49107.12092.1mRNA_H-elongata_contig49107.12092.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49107 746..3974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49107.12092.1 ID=prot_H-elongata_contig49107.12092.1|Name=mRNA_H-elongata_contig49107.12092.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp
TRRAEGLNDLVDFAVFPALQGGPHNHQIAALATALREAARPEFKSYIRRV
KANARALAAGLRTMGHEVATGGTDNHLLLWDLRPKGLTGSKMEKVLEACS
ISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFEKTVAGFLDEAAS
LACAAQERAGSKKLAAFVAELERDEGVKELKRDVEAFASRFYFPGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039429SHMT-like_dom
IPR015422PyrdxlP-dep_Trfase_dom1
IPR015421PyrdxlP-dep_Trfase_major
IPR001085Ser_HO-MeTrfase
IPR019775WD40_repeat_CS
IPR015424PyrdxlP-dep_Trfase