prot_H-elongata_contig48846.12056.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48846.12056.1
Unique Nameprot_H-elongata_contig48846.12056.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length253
Homology
BLAST of mRNA_H-elongata_contig48846.12056.1 vs. uniprot
Match: D8LFR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR0_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 2.900e-96
Identity = 142/253 (56.13%), Postives = 183/253 (72.33%), Query Frame = 0
Query:    1 GYLIFVNGREQLGCNRHLVADGIFLAKTLNRTLVEFPVRDSRISGADSKLGLGAYWDLDHLCRSHRIISLVAFRALIFAGAIDAHEFVTMAPISNEANPMQALETVDDVLAVFQGYVDRQVIVLTNQWKSGLDRGYASFLRPNPFYSRIARRLIDEQEGWEENTFLAVQWRTETATGNLTTCYHHIREKVDVHLRRKDWSRNQVFFNTDLVDRASATYAKKNSEMKRETLRLIREDFPVANNNSVFTFLAEVE 253
            GY+IFVNGREQLG NR+L++DG+++AKTLNRTLVEFPV ++RIS ADS LG GAYWDLD LC+ HRI+ L AFR+LI AG +D  +F+ M P+   A+PM  L T  DV   F GY D QVIV+  QWKS + R     +RP PFY  +ARRLID+Q+GWE   FLAVQWRTET+TGNLT CY H+RE V+ +  ++ + R QVFFNTDL+  +S TY+ +   +K + L +I ED+P A NN+V  +L  +E
Sbjct:  146 GYIIFVNGREQLGSNRYLLSDGLYIAKTLNRTLVEFPVANARISRADSDLGFGAYWDLDSLCQYHRILGLGAFRSLIEAGRLDVEKFLVMTPVRPSADPMSTLRTAKDVREAFGGYEDSQVIVMNGQWKSNIRRYPLKLIRPLPFYENLARRLIDQQQGWENEAFLAVQWRTETSTGNLTACYGHVREAVERYREQEGFDRGQVFFNTDLMPHSSGTYSSQQLAVKLQVLAMIDEDYPSAMNNTVTAYLDNLE 398          
BLAST of mRNA_H-elongata_contig48846.12056.1 vs. uniprot
Match: A0A6H5KP62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP62_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 1.130e-95
Identity = 141/253 (55.73%), Postives = 184/253 (72.73%), Query Frame = 0
Query:    1 GYLIFVNGREQLGCNRHLVADGIFLAKTLNRTLVEFPVRDSRISGADSKLGLGAYWDLDHLCRSHRIISLVAFRALIFAGAIDAHEFVTMAPISNEANPMQALETVDDVLAVFQGYVDRQVIVLTNQWKSGLDRGYASFLRPNPFYSRIARRLIDEQEGWEENTFLAVQWRTETATGNLTTCYHHIREKVDVHLRRKDWSRNQVFFNTDLVDRASATYAKKNSEMKRETLRLIREDFPVANNNSVFTFLAEVE 253
            GYLIFVNGREQLG NR+L++DG+++AKTLNRTLVEFPV ++RIS ADS LG GAYW LD LCR HRI+ L AFR+LI AG +D  +F+ M P+   A+PM  L+T  DV   F GY D QVIV+ +QWKS + R     ++P PFY  +ARRLID+Q+GWE   FLAVQWRTET+TGNLT CY H+RE V+ +  ++ + R QVFFNTDL   +S TY+ +   +K++ L +I ED+P A N++V  +L  +E
Sbjct:  144 GYLIFVNGREQLGSNRYLLSDGLYIAKTLNRTLVEFPVANARISRADSDLGFGAYWGLDSLCRYHRILGLGAFRSLIEAGRLDVEKFLVMTPVRPSADPMSTLKTAKDVREAFGGYEDSQVIVMNDQWKSNIRREPLKLIKPLPFYENLARRLIDQQQGWENEAFLAVQWRTETSTGNLTACYGHVREAVERYREQEGFDRGQVFFNTDLTPHSSGTYSSQQLAVKQQVLAMIDEDYPSAMNSTVTAYLDNLE 396          
BLAST of mRNA_H-elongata_contig48846.12056.1 vs. uniprot
Match: A0A6H5JCA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA8_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 9.510e-63
Identity = 109/254 (42.91%), Postives = 155/254 (61.02%), Query Frame = 0
Query:    1 GYLIFVNGREQLGCNRHLVADGIFLAKTLNRTLVEFPVRDSRISGAD-SKLGLGAYWDLDHLCRSHRIISLVAFRALIFAGAIDAHEFVTMAPISNEANPMQALETVDDVLAVFQGYVDRQVIVLTNQWKSGLDRGYASFLRPNPFYSRIARRLIDEQEGWEENTFLAVQWRTETATGNLTTCYHHIREKVDVHLRRKDWSRNQVFFNTDLVDRASATYAKKNSEMKRETLRLIREDFPVANNNSVFTFLAEVE 253
            GY+++VNGREQLG N+ LV+DGIF+AK L RT VE+PV+D+R++  + + +GLGAYWDL  LC  HRI+ L +FR ++  G I    F T+   S+E     A +  + ++ +F+ Y   QVIV+ + WKSG +R    FLRPNPF+  I R L++ Q+ WE   F+AVQWRTE + GNLT CY  ++  V+       +  +QV FNTDL  + S TY           L LI  D+P A +N +  F  E++
Sbjct:  239 GYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDARVAKLEEASIGLGAYWDLSELCMYHRILDLNSFRNMMVDGRIPPEAFTTIRSDSHEVLLYHATDE-EHMVDMFKDYEKYQVIVMESTWKSGNERDALQFLRPNPFFVGIVRMLLEAQKDWETGEFVAVQWRTELSNGNLTECYQEVKALVEEQRVALGYGTHQVLFNTDLYGKTSGTYKASAQAHGAAVLDLINHDYPHALHNELHQFFTEID 491          
BLAST of mRNA_H-elongata_contig48846.12056.1 vs. uniprot
Match: D8LN55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN55_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 2.680e-62
Identity = 107/254 (42.13%), Postives = 153/254 (60.24%), Query Frame = 0
Query:    1 GYLIFVNGREQLGCNRHLVADGIFLAKTLNRTLVEFPVRDSRISGA-DSKLGLGAYWDLDHLCRSHRIISLVAFRALIFAGAIDAHEFVTMAPISNEANPMQALETVDDVLAVFQGYVDRQVIVLTNQWKSGLDRGYASFLRPNPFYSRIARRLIDEQEGWEENTFLAVQWRTETATGNLTTCYHHIREKVDVHLRRKDWSRNQVFFNTDLVDRASATYAKKNSEMKRETLRLIREDFPVANNNSVFTFLAEVE 253
            GY+++VNGREQLG N+ LV DGIF+AK L RT VE+PV+D+R++   D+ +GLGAYWDL  LC  HRI+ L +FR ++  G I    F T+   ++E     A +  + ++ +F+     QVI + + WKSG +R    FLRPNPF+  I R L++ Q+ WE   F+AVQWRTE A G+LT CY  ++  V+       +  +QV FNTDL  + S TY           L LI +D+P A +N +  F  E++
Sbjct:  114 GYVVYVNGREQLGGNKFLVTDGIFMAKALGRTFVEYPVKDARVAKLEDASIGLGAYWDLSELCMYHRILDLTSFRNMMADGRIPPEAFTTIRSDTHEVLLRHATDE-EHIVDMFKDSDKYQVIAMESTWKSGKEREALQFLRPNPFFVGIVRMLLEAQKDWETGEFVAVQWRTELANGDLTECYKEVKALVEEQRVALGYGTHQVLFNTDLYGKTSGTYKASAQAHGAAVLDLINDDYPQALHNELHHFFTEID 366          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48846.12056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LFR0_ECTSI2.900e-9656.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KP62_9PHAE1.130e-9555.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCA8_9PHAE9.510e-6342.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN55_ECTSI2.680e-6242.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48846contigH-elongata_contig48846:91..2563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48846.12056.1mRNA_H-elongata_contig48846.12056.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48846 91..2563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48846.12056.1 ID=prot_H-elongata_contig48846.12056.1|Name=mRNA_H-elongata_contig48846.12056.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
GYLIFVNGREQLGCNRHLVADGIFLAKTLNRTLVEFPVRDSRISGADSKL
GLGAYWDLDHLCRSHRIISLVAFRALIFAGAIDAHEFVTMAPISNEANPM
QALETVDDVLAVFQGYVDRQVIVLTNQWKSGLDRGYASFLRPNPFYSRIA
RRLIDEQEGWEENTFLAVQWRTETATGNLTTCYHHIREKVDVHLRRKDWS
RNQVFFNTDLVDRASATYAKKNSEMKRETLRLIREDFPVANNNSVFTFLA
EVE
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