prot_H-elongata_contig4877.12043.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4877.12043.1
Unique Nameprot_H-elongata_contig4877.12043.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length82
Homology
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: D8LBE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE6_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 9.410e-38
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0
Query:    1 MSRVQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKF 79
            +++ QTAGG+YLP+SK GKTNEGEV+AVGPGRVT SG  + VNV VG+TVLLPEYGG TL LGDEELSLFRDEDILGKF
Sbjct:   21 VAKTQTAGGVYLPDSKLGKTNEGEVVAVGPGRVTGSGTKIEVNVKVGETVLLPEYGGTTLTLGDEELSLFRDEDILGKF 99          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A067CE69_SAPPC (Chaperonin GroS n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE69_SAPPC)

HSP 1 Score: 106 bits (265), Expect = 2.480e-28
Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    4 VQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKFH 80
            ++TAGGIYLP+S     NEGEV+AVGPG     G  +P+NV VGD VLLPEYGG  LKLG++E  LFRDEDILGKF+
Sbjct:   23 LKTAGGIYLPDSAKNTQNEGEVVAVGPGARNHEGTIIPMNVAVGDKVLLPEYGGSLLKLGEDEFHLFRDEDILGKFN 99          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A836C8A7_9STRA (10 kDa heat shock protein-like protein, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A7_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.150e-28
Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    3 RVQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKF 79
            + QTAGG++LPE+K  K NE EVIAVGPGR T+ G  +P++++VGDTVLLPEYGG T+ L  E+++L R+E+ILGKF
Sbjct:   22 KAQTAGGVFLPETKMAKLNEAEVIAVGPGRRTEDGKVVPMSISVGDTVLLPEYGGHTVSLSGEDVTLLREEEILGKF 98          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A4D9DF31_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DF31_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.390e-27
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 MSRVQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKF 79
            + + QTAGG++LPE+K  K NEG+VIA+G G     G  +P +V  GDTVLLPEYGG T+KLGDEE  LFRDED+LGKF
Sbjct:   19 LPKTQTAGGVFLPETKLDKPNEGKVIAIGAGGRKADGTLIPPSVKEGDTVLLPEYGGHTVKLGDEEYQLFRDEDLLGKF 97          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A024T9R5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9R5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.220e-27
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    4 VQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKFH 80
            ++TAGGIYLP+S      EGEV+AVGPG     G  +P+ V+VGD VLLPEYGG  LKLGD+E  L+RDE+ILGKFH
Sbjct:   24 LKTAGGIYLPDSAKNTQTEGEVVAVGPGARNFEGNLIPIGVSVGDKVLLPEYGGSVLKLGDDEFHLYRDEEILGKFH 100          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: W7TMI6_9STRA (10 kDa chaperonin n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMI6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.750e-27
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 MSRVQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKF 79
            + + QTAGG++LPE+K  K NEG+VIAVG G     G  +P +V  GDTVLLPEYGG T+KLGDEE  LFRDED+LGKF
Sbjct:   82 LPKTQTAGGVFLPETKLDKPNEGKVIAVGAGGRKADGTLIPPSVKEGDTVLLPEYGGHTVKLGDEEYQLFRDEDLLGKF 160          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A485LQG0_9STRA (Aste57867_23858 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LQG0_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.170e-26
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    4 VQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKFH 80
            ++TAGGIYLP+S      EGEV+AVGPG     G  +PV+V VGD VLLPEYGG  LKLG++E  L+RDE+ILGKFH
Sbjct:   23 LKTAGGIYLPDSGKNTQTEGEVVAVGPGARNHEGNIIPVSVAVGDKVLLPEYGGSILKLGEDEFHLYRDEEILGKFH 99          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A397D550_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D550_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.290e-26
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    4 VQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKFH 80
            ++TAGGIYLP+S      EGEV+AVGPG     G+ +P+ V+VGD VLLPEYGG  LKLG++E  L+RDE+ILGKFH
Sbjct:   51 LKTAGGIYLPDSGKNSQTEGEVVAVGPGARNHEGSLIPLGVSVGDKVLLPEYGGSVLKLGEDEFHLYRDEEILGKFH 127          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A5A8EDG3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDG3_CAFRO)

HSP 1 Score: 100 bits (249), Expect = 7.170e-26
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    4 VQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKF 79
            ++TAGG+ LPES   K NEGEV+AVGPG +   G    V V VGDTVLLPEYGG T+K+GD+E  LFRDEDILGKF
Sbjct:   25 LKTAGGVLLPESGV-KKNEGEVVAVGPGALDRDGKRRAVAVAVGDTVLLPEYGGHTVKMGDQEFQLFRDEDILGKF 99          
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Match: A0A7S1V0N9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V0N9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.580e-25
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    4 VQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTVLLPEYGGQTLKLGDEELSLFRDEDILGKFHG 81
            VQTAGGIYLPES +   NEGEV+AVGPG    +GA    N+  GD+VLLPEYGG  +KL DEE+ LFR+ DILGKF G
Sbjct:   52 VQTAGGIYLPESTSKDANEGEVVAVGPGERDVTGALHAPNLKAGDSVLLPEYGGTKVKLDDEEVFLFRESDILGKFEG 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4877.12043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBE6_ECTSI9.410e-3878.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A067CE69_SAPPC2.480e-2864.94Chaperonin GroS n=4 Tax=Saprolegniaceae TaxID=4764... [more]
A0A836C8A7_9STRA5.150e-2861.0410 kDa heat shock protein-like protein, mitochondr... [more]
A0A4D9DF31_9STRA1.390e-2762.03Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A024T9R5_9STRA4.220e-2762.34Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
W7TMI6_9STRA5.750e-2763.2910 kDa chaperonin n=2 Tax=Nannochloropsis gaditana... [more]
A0A485LQG0_9STRA1.170e-2662.34Aste57867_23858 protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A397D550_9STRA1.290e-2661.04Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A5A8EDG3_CAFRO7.170e-2665.79Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S1V0N9_9STRA1.580e-2564.10Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 66..79
score: 31.99
coord: 45..57
score: 49.2
coord: 10..31
score: 48.15
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 1..79
e-value: 1.1E-22
score: 91.3
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 5..78
e-value: 3.2E-22
score: 78.4
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 4..79
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40coord: 2..81
e-value: 1.2E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR10772:SF010 KDA HEAT SHOCK PROTEIN, MITOCHONDRIALcoord: 4..79
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 5..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4877contigH-elongata_contig4877:279..991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4877.12043.1mRNA_H-elongata_contig4877.12043.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4877 279..2228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4877.12043.1 ID=prot_H-elongata_contig4877.12043.1|Name=mRNA_H-elongata_contig4877.12043.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
MSRVQTAGGIYLPESKTGKTNEGEVIAVGPGRVTDSGATLPVNVTVGDTV
LLPEYGGQTLKLGDEELSLFRDEDILGKFHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR011032GroES-like_sf