prot_H-elongata_contig48702.12032.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48702.12032.1
Unique Nameprot_H-elongata_contig48702.12032.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: D7G581_ECTSI (Chlorophyll synthase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G581_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 5.670e-117
Identity = 166/195 (85.13%), Postives = 174/195 (89.23%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            +VIEQIW LL+GGL + YGLDVWAGHDFP +FALSV G  ISYIYSAPP+KLKQNGWLGNYALGSSYISLPWWCGQAMFGELN+Q          VVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVE AKW+CV SIDATQLGIAAWLYYIGEPTYAAILTALVLPQ+ AQFKYFLPDPV NDVK
Sbjct:  208 QVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ----------VVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVK 392          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A835YRI7_9STRA (Chlorophyll synthase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI7_9STRA)

HSP 1 Score: 331 bits (849), Expect = 1.020e-110
Identity = 161/195 (82.56%), Postives = 170/195 (87.18%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            +V  QI  LL GGL + YGLD+WAGHD P+I  LS+FG  ISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELN+Q          VV+LTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASID TQLGIAAWLY +GEPTYAA+LTALVLPQI AQFKYFLPDPVENDVK
Sbjct:  199 QVKAQIAFLLGGGLALAYGLDLWAGHDTPTILLLSIFGSFISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQ----------VVVLTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDLTQLGIAAWLYSVGEPTYAAVLTALVLPQIYAQFKYFLPDPVENDVK 383          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: D7P7W3_ELYCH (Chlorophyll synthase subunit G (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=D7P7W3_ELYCH)

HSP 1 Score: 322 bits (825), Expect = 3.980e-109
Identity = 153/195 (78.46%), Postives = 166/195 (85.13%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            +V  QI  LL+GGL + YGLD+WAGH  P++F LS+FG  ISYIYSAPPLKLKQNGW GN+ALGSSYISLPWWCGQAMFGELNLQ          VV+LTLLYSWAGLGIAIVNDFKSVEGDR MGLQSLPVAFG+E AKWICV+SID TQLGIAAWLYYIGEPTYA +L  L+LPQI AQFKYFLPDPVENDVK
Sbjct:   69 QVKAQIAFLLVGGLALSYGLDLWAGHQMPTVFLLSLFGTFISYIYSAPPLKLKQNGWAGNFALGSSYISLPWWCGQAMFGELNLQ----------VVVLTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGIEKAKWICVSSIDITQLGIAAWLYYIGEPTYAFVLLGLILPQIYAQFKYFLPDPVENDVK 253          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A1Y1IHS9_KLENI (Chlorophyll synthase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHS9_KLENI)

HSP 1 Score: 295 bits (754), Expect = 3.560e-96
Identity = 140/195 (71.79%), Postives = 161/195 (82.56%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            +VI QIWVLL+GGL V YGLDVWAGH+FP + ALS  G  +SYIYSAPPLKLKQ+GW+GNYALGSSYISLPWW GQA+FG           IT +VV+LTLLYS AGLGIAIVNDFKS+EGDR MGL SLPVAFGV+TAKWICVASIDATQL +AA+L   G+ TYAA+L  L+LPQI  Q+KYF+PDP++NDVK
Sbjct:  214 DVIAQIWVLLLGGLAVAYGLDVWAGHEFPIVLALSAGGSFLSYIYSAPPLKLKQSGWIGNYALGSSYISLPWWAGQAVFGS----------ITPDVVVLTLLYSIAGLGIAIVNDFKSIEGDRAMGLNSLPVAFGVDTAKWICVASIDATQLSVAAYLAATGQTTYAAVLLGLILPQIFFQYKYFIPDPIKNDVK 398          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A7S1XSB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSB6_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.080e-94
Identity = 143/195 (73.33%), Postives = 159/195 (81.54%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            EVI QIW LL+GGL +   LD+WAGH+ P++F LS+FG  ISYIYSAPPLKLKQNGW+GNYALGSSYISLPWWCGQAMFGELN Q          V ILTLLYSWAGLGIAIVNDFKSVEGDR MGLQSLPVAFGV+ AKWICVASIDATQ  +AA+L Y G+  YAA LTAL+LPQ+  Q K+FL DPVE DV+
Sbjct:  218 EVIFQIWFLLLGGLGLAGALDLWAGHETPTVFLLSLFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPWWCGQAMFGELNWQ----------VCILTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGVDKAKWICVASIDATQAAVAAYLAYNGQYGYAAALTALILPQMYFQQKFFLKDPVEYDVQ 402          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A2P6TI09_CHLSO (Chlorophyll synthetase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TI09_CHLSO)

HSP 1 Score: 288 bits (736), Expect = 8.010e-94
Identity = 141/196 (71.94%), Postives = 161/196 (82.14%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYY-IGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            EVI QIW+LL+GG+ V   LD+WAGHDFP +  L+VFG  ISYIYSAPPLKLKQ+GW GNYALGSSYI+LPWW GQA+FG L L          +V++LT+LYS AGLGIAIVNDFKS+EGDR MGLQSLPVAFGVETAKWICVASIDATQLG+AA+L + + EP YAA+L  L+LPQI AQ KYFLPDPV NDVK
Sbjct:  165 EVIAQIWILLLGGIGVAAVLDLWAGHDFPIMTLLAVFGSFISYIYSAPPLKLKQSGWAGNYALGSSYIALPWWAGQALFGTLTL----------DVMVLTVLYSIAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGVETAKWICVASIDATQLGVAAYLAFGLDEPIYAAVLLGLILPQIYAQVKYFLPDPVANDVK 350          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A6V1M160_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M160_HETAK)

HSP 1 Score: 284 bits (727), Expect = 2.020e-92
Identity = 135/195 (69.23%), Postives = 158/195 (81.03%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            EVI QIW LL+GGL + YG+DVW GHD P++F LSVFG  ISYIYSAPPLKLKQ+ W+GNYALG+SYI+LPWWCGQA FGEL          T +VV+LT+LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFGVE AKWICV++ID TQL +AA+LY+ G+PTY  +L  LVLPQI  Q KY +PDP+ NDVK
Sbjct:  190 EVIGQIWFLLLGGLGLAYGIDVWVGHDVPTVFLLSVFGSFISYIYSAPPLKLKQS-WVGNYALGASYIALPWWCGQAAFGEL----------TWDVVVLTVLYSLAGLGIAIVNDFKSIEGDRALGLQSLPVAFGVEKAKWICVSTIDVTQLAVAAYLYWSGQPTYGLVLLGLVLPQIALQAKYLIPDPINNDVK 373          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A2P6VPN9_9CHLO (Chlorophyll synthetase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VPN9_9CHLO)

HSP 1 Score: 284 bits (726), Expect = 2.860e-92
Identity = 138/196 (70.41%), Postives = 158/196 (80.61%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYY-IGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            EV  QIW LL+GG+ V Y LD WAGHDFP + AL+  G  ISYIYSAPPLKLKQ+GW GNYALGSSYI+LPWW GQA+FG L L          +V +LT+LYS AGLGIAIVNDFKS+EGDR MGLQSLPVAFGV+TAKWICVASIDATQLG+AA+L + + EP + A+L AL+LPQI AQ+KYFLPDPV NDVK
Sbjct:  166 EVKAQIWALLLGGIGVAYALDTWAGHDFPIMTALAAGGSFISYIYSAPPLKLKQSGWAGNYALGSSYIALPWWAGQALFGTLTL----------DVCVLTILYSIAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGVDTAKWICVASIDATQLGVAAYLAFGLNEPIFGAVLLALILPQIYAQYKYFLPDPVANDVK 351          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: A0A7S1ZAA9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAA9_TRICV)

HSP 1 Score: 282 bits (721), Expect = 5.560e-92
Identity = 135/195 (69.23%), Postives = 155/195 (79.49%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDVK 201
            EVI QIW+LL+GGL + YGLDVWAGH+FP++ ALSVFG  ISYIYSAPPLKLKQNGW GN+ALG+SYISLPWWCGQA+FGEL+              IL +LYS AGLGIAIVNDFKS+EGDR +GL SLPVAFG++ AK+IC  S+  TQLG+A +LY I EPTYAAIL AL+LPQI  Q    LPDPVENDVK
Sbjct:  149 EVIAQIWILLLGGLGIAYGLDVWAGHEFPTVLALSVFGSFISYIYSAPPLKLKQNGWAGNFALGASYISLPWWCGQAVFGELDKPVYW---------ILPILYSIAGLGIAIVNDFKSIEGDRALGLNSLPVAFGIDGAKYICAGSVTLTQLGVAGYLYSINEPTYAAILLALILPQIYFQATLLLPDPVENDVK 334          
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Match: Q7XYK8_BIGNA (Chlorophyll synthetase n=1 Tax=Bigelowiella natans TaxID=227086 RepID=Q7XYK8_BIGNA)

HSP 1 Score: 286 bits (731), Expect = 9.720e-92
Identity = 136/194 (70.10%), Postives = 157/194 (80.93%), Query Frame = 0
Query:    7 EVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITANVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDV 200
            EVI QIW LL+GGL + YGLD WAGHDFP + ALS+ G  +SYIYSAPPLKLKQ+GW GNYALGSSYI+LPWWCGQAMFG LN          A V++L+LLYS AGLGIAIVNDFKS+EGDR++GLQSLPVAFGV+TAKW+C  SID TQLG+AA+LY IGE TYA IL AL+LPQ+  Q KY L DP++ DV
Sbjct:  289 EVIAQIWALLLGGLGLAYGLDQWAGHDFPMVTALSIGGSFVSYIYSAPPLKLKQSGWAGNYALGSSYIALPWWCGQAMFGTLN----------APVIVLSLLYSIAGLGIAIVNDFKSIEGDRKLGLQSLPVAFGVDTAKWLCAGSIDVTQLGVAAYLYSIGETTYANILIALILPQMFFQNKYLLKDPIKYDV 472          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48702.12032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G581_ECTSI5.670e-11785.13Chlorophyll synthase, putative chloroplast n=1 Tax... [more]
A0A835YRI7_9STRA1.020e-11082.56Chlorophyll synthase, putative chloroplast n=1 Tax... [more]
D7P7W3_ELYCH3.980e-10978.46Chlorophyll synthase subunit G (Fragment) n=4 Tax=... [more]
A0A1Y1IHS9_KLENI3.560e-9671.79Chlorophyll synthase n=1 Tax=Klebsormidium nitens ... [more]
A0A7S1XSB6_9STRA2.080e-9473.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2P6TI09_CHLSO8.010e-9471.94Chlorophyll synthetase n=1 Tax=Chlorella sorokinia... [more]
A0A6V1M160_HETAK2.020e-9269.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2P6VPN9_9CHLO2.860e-9270.41Chlorophyll synthetase n=1 Tax=Micractinium conduc... [more]
A0A7S1ZAA9_TRICV5.560e-9269.23Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
Q7XYK8_BIGNA9.720e-9270.10Chlorophyll synthetase n=1 Tax=Bigelowiella natans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000537UbiA prenyltransferase familyPFAMPF01040UbiAcoord: 13..191
e-value: 3.1E-18
score: 66.0
NoneNo IPR availablePANTHERPTHR42723FAMILY NOT NAMEDcoord: 7..201
NoneNo IPR availablePANTHERPTHR42723:SF2CHLOROPHYLL SYNTHASE, CHLOROPLASTICcoord: 7..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..201
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 12..30
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 63..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48702contigH-elongata_contig48702:383..1721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48702.12032.1mRNA_H-elongata_contig48702.12032.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48702 383..3615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48702.12032.1 ID=prot_H-elongata_contig48702.12032.1|Name=mRNA_H-elongata_contig48702.12032.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
MSPFRFEVIEQIWVLLIGGLCVGYGLDVWAGHDFPSIFALSVFGCLISYI
YSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNLQASRATAITA
NVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICV
ASIDATQLGIAAWLYYIGEPTYAAILTALVLPQILAQFKYFLPDPVENDV
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase