prot_H-elongata_contig48683.12030.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48683.12030.1
Unique Nameprot_H-elongata_contig48683.12030.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length224
Homology
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 3.580e-100
Identity = 161/211 (76.30%), Postives = 179/211 (84.83%), Query Frame = 0
Query:    7 LEIAKGSPSAATAAVQGFLKSSVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            +E AK   SA + AVQ FL SSV KVEELGPLG +YFG LYVLAEVLIIPA+PLT AAGFLFG  GGTAVVL SATIAA ISFQLGRTLLRQQVEGLLE+NPKFRA+DKAIAKEGFK+ILLLRLSPIFPFALSNYLYGVTSVDF+E+M GT+LGFFPGTL YVYGGT+GK +  G G  LPWY  VA     A+LLKT G+IAT+A+E++E
Sbjct:  208 VETAKAGHSAPSTAVQAFLSSSVTKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGTGLPWYGYVAGAALTAYLLKTVGEIATAAVEEME 418          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA)

HSP 1 Score: 234 bits (596), Expect = 6.120e-75
Identity = 120/193 (62.18%), Postives = 149/193 (77.20%), Query Frame = 0
Query:   32 VEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGG-TVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIEPSLRDK 223
            ++  GP+G LYFG LYV+AEVL IPALPLT ++G+LFG+ GGT VV+ SATIAA ISF LGRT LR+ VE LL DN KF+AID AI +EGFKIILLLRLSPIFPFA+SNYLYG+TSV F E++G ++LGF PGT+ YVYGG  +G  + GG+G  LPWY     +V VA  +K  GDIAT A+ +IEP + ++
Sbjct:    2 IQSAGPMGYLYFGALYVIAEVLAIPALPLTASSGYLFGLVGGTTVVICSATIAAGISFLLGRTFLRKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIEPGIMEE 194          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.410e-67
Identity = 114/196 (58.16%), Postives = 141/196 (71.94%), Query Frame = 0
Query:   22 QGFLKSSVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            Q  L  +V ++E  G +G LYFG +Y +AE+L IPA+PLT +AG+LFGV  GTAVVL++A++AA +SF LGR  LR  VE +LEDNP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F  +  GT+LGF PGTL YVY G  GK +    GMA PWY     +   A  +K   DIAT  IED+E
Sbjct:   25 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 220          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.770e-66
Identity = 122/223 (54.71%), Postives = 152/223 (68.16%), Query Frame = 0
Query:    2 SFGAVLEIAKGSPSAATAAVQGF-------LKSSVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            S G V + +  S S  T AVQ F       L++ V  VE +GP G LYFG +Y +AE+L IPA+PLT +AG+LFGV  GTAVVL SA+IAA ISF +GRTLLR  VE +LED PKF+ IDKAI +EGFK++LLLRLSPIFPFALSNYLYG TS+ F  +  GT+LGF PGT+ YVY G +GK +      A PWY     +  +A  LK   D+AT  IE+++
Sbjct:  153 SLGIVGDFSLPSSSGVTMAVQRFFSDPNASLEAVVKSVEAMGPSGFLYFGIIYTVAEILAIPAIPLTASAGYLFGVTEGTAVVLASASIAAAISFIIGRTLLRTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAEPWYVYAGGMTLLAGCLKVVADVATGIIENLD 375          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A7S0CCP1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP1_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.110e-65
Identity = 105/190 (55.26%), Postives = 140/190 (73.68%), Query Frame = 0
Query:   28 SVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            +V +++++GP G  YFG +Y +AE+L IPA+PLT +AG+LFGV  GT +VLLSA+IAA ISF +GRTLLR  VEG+L + PK + +D+AI+ +GFKI+LL+R++PIFPFALSNYLYGVTSV F  +  GT+LGF PGT  YVY G VGK +  G+  A PWY     +   +  LK  GDIA+  I++IE
Sbjct:    3 TVTQIQDMGPSGVAYFGFIYTIAEILAIPAIPLTASAGYLFGVRDGTLIVLLSASIAASISFFIGRTLLRSYVEGILGEYPKLQKLDRAISSQGFKIMLLVRIAPIFPFALSNYLYGVTSVKFWPYFWGTMLGFAPGTFAYVYSGVVGKILTSGDDAAQPWYVYAGGLALFSGFLKIGGDIASDIIDNIE 192          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.470e-65
Identity = 114/196 (58.16%), Postives = 141/196 (71.94%), Query Frame = 0
Query:   22 QGFLKSSVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            Q  L  +V ++E  G +G LYFG +Y +AE+L IPA+PLT +AG+LFGV  GTAVVL++A++AA +SF LGR  LR  VE +LEDNP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F  +  GT+LGF PGTL YVY G  GK +    GMA PWY     +   A  +K   DIAT  IED+E
Sbjct:  163 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 358          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A7S2K1V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1V4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.040e-65
Identity = 110/174 (63.22%), Postives = 134/174 (77.01%), Query Frame = 0
Query:   25 LKSSVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFV 198
            L++ V++VE +G LG LYFG  Y +AE+L IPA PLT +AG+LFG+ GGT +VLLSA+IAA ISF +GRT LR  VEGLLE  PKF+A+DKAI KEGFK+ILLLRLSP+FPFALSNYLYGVTSV F+E+  GT+LGF PGT+ YVY G VGK +    G A PWY   A +  +
Sbjct:  156 LENIVSQVETMGNLGFLYFGIFYTIAEILAIPAFPLTCSAGYLFGLQGGTTIVLLSASIAASISFLIGRTALRSYVEGLLEKYPKFKAMDKAIGKEGFKLILLLRLSPLFPFALSNYLYGVTSVRFVEYFWGTLLGFLPGTMAYVYSGDVGKALTLDSGNAQPWYVYAAGLAVI 329          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A448YYH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH2_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.940e-65
Identity = 111/186 (59.68%), Postives = 136/186 (73.12%), Query Frame = 0
Query:   33 EELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGM-ALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            E +GPLG  YFG  Y +AE+L IPA+PLT +AG+LFG   GTAVVLLSA++AA +SF +GRT LR+ VEGLLE+NP+F  +DKAI +EGFK++LLLRLSPIFPFALSNYLYG TS++F  F GGT+LGF PGT+ YVY G VGK + G  G  A PWY     +   A  LK   D AT  + +IE
Sbjct:  206 ESMGPLGVAYFGVAYCIAEILAIPAIPLTASAGYLFGPVQGTAVVLLSASVAAGVSFWIGRTFLREYVEGLLEENPRFGKLDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFSAFFGGTLLGFAPGTIAYVYTGYVGKALTGDAGGDAYPWYVYGGGLALFAAFLKVVADEATRVVREIE 391          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.830e-63
Identity = 106/193 (54.92%), Postives = 137/193 (70.98%), Query Frame = 0
Query:   25 LKSSVAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            L+  V  V  +GPLG +YFG  Y +AE+L IPA+PLT +AG+LFG   GT VVL+SA+IAA ISF +GRTLLR  VEG+L+D PKF  IDKAI KEGFK++ LLRLSP+FPFALSNYLYG +S++F  F  GT+LGF PGT+ YVY G VGK +        PWY  V  +  ++ L+K   D AT  +++++
Sbjct:   73 LERVVDAVASMGPLGAVYFGVAYTIAEILAIPAIPLTASAGYLFGPVQGTGVVLVSASIAAAISFLIGRTLLRDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEVYPWYFYVGGLALLSGLIKVLADTATRIVDELD 265          
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Match: K0R4C6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4C6_THAOC)

HSP 1 Score: 201 bits (511), Expect = 4.100e-60
Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 0
Query:   41 LYFGGLYVLAEVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQVEGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDFMEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAFLLKTAGDIATSAIEDIE 217
            LYFG  YVLAE+L IPA PLT A+G+LFG   GTA  L SA IAA +SF +G+TLLR  VE +L++NPKFR++D+AI KEGFK+++LLRLSP+FPFALSNYLYG +S+ F  +  GTILGF PGT  YVYGG +GK +  G   A PWY     +  +  L+K  GD+ATS I+ +E
Sbjct:  167 LYFGIFYVLAEILAIPAFPLTAASGYLFGAFPGTATCLFSAAIAASVSFVIGKTLLRGYVEDVLDENPKFRSMDRAIEKEGFKLMVLLRLSPLFPFALSNYLYGASSIRFPSYFFGTILGFAPGTFAYVYGGVIGKELTVGGDSAQPWYVYAGGMAVIVGLIKVIGDVATSVIDAME 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48683.12030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C0_9PHAE3.580e-10076.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF34_9STRA6.120e-7562.18Snare associated Golgi protein-domain-containing p... [more]
A0A7S1FUG6_9STRA2.410e-6758.16Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4I716_9STRA1.770e-6654.71Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S0CCP1_9STRA1.110e-6555.26Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1FUT1_9STRA1.470e-6558.16Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2K1V4_9STRA4.040e-6563.22Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A448YYH2_9STRA7.940e-6559.68Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9WRQ5_9STRA1.830e-6354.92Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
K0R4C6_THAOC4.100e-6057.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 55..172
e-value: 5.0E-26
score: 91.5
NoneNo IPR availablePANTHERPTHR46826FAMILY NOT NAMEDcoord: 19..217
NoneNo IPR availablePANTHERPTHR46826:SF1coord: 19..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..65
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 185..202
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48683contigH-elongata_contig48683:2028..3774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48683.12030.1mRNA_H-elongata_contig48683.12030.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48683 2028..3774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48683.12030.1 ID=prot_H-elongata_contig48683.12030.1|Name=mRNA_H-elongata_contig48683.12030.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp
ASFGAVLEIAKGSPSAATAAVQGFLKSSVAKVEELGPLGPLYFGGLYVLA
EVLIIPALPLTTAAGFLFGVPGGTAVVLLSATIAAVISFQLGRTLLRQQV
EGLLEDNPKFRAIDKAIAKEGFKIILLLRLSPIFPFALSNYLYGVTSVDF
MEFMGGTILGFFPGTLLYVYGGTVGKGIMGGEGMALPWYADVAAIVFVAF
LLKTAGDIATSAIEDIEPSLRDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc