prot_H-elongata_contig4868.12029.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4868.12029.1
Unique Nameprot_H-elongata_contig4868.12029.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length257
Homology
BLAST of mRNA_H-elongata_contig4868.12029.1 vs. uniprot
Match: D7FZ10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ10_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 6.640e-58
Identity = 104/203 (51.23%), Postives = 140/203 (68.97%), Query Frame = 0
Query:   37 AFCERYQIEFCIGATMFWIVGGKDGATSLLKKYVLDTEKSSGGNEHLLVEWLWLAFVIGRLVGLLDLQYVVNIPRLHRQLTILFLCGAAGAVAVLVFEGSKIVLWAGVAAYGLSNGPLCGYSSELYNRVAIHSDTGVAMVVFGMNTG-SMMPYVISWVWDETVWPPSLFVILAASHLVPLWLILNSRRVAESKENKDMSECET 238
            AF  RY+IEF I   +F ++GGK GAT+ L+ YV DT+     +  LL+  LW A  IGRL GL D +++  +PRL+R  TILFLCGAA A A+LVF+ S  VLW G+AAYGL NGP  GY  +L NRV + S+ G+++V+FG+N G S++PYVISWVWD T WP +L VI+  SHL+P  L+LN++R+ E+ + K   E  T
Sbjct:  263 AFYRRYKIEFHISGMVFCLIGGKVGATAYLESYVDDTDVIDESHAELLIVVLWTAITIGRLAGLQDQRHL-TLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLYNGPTVGYCYDLNNRVTMPSEMGMSVVMFGLNFGASIVPYVISWVWDYTDWPETLIVIIMLSHLLPYPLMLNAKRIDEANKRKLREEAIT 464          
BLAST of mRNA_H-elongata_contig4868.12029.1 vs. uniprot
Match: D7G4N2_ECTSI (Similar to sodium-dependent glucose transporter 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N2_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 3.180e-48
Identity = 88/195 (45.13%), Postives = 126/195 (64.62%), Query Frame = 0
Query:   38 FCERYQIEFCIGATMFWIVGGKDGATSLLKKYVLDTEKSSGGNEHLLVEWLWLAFVIGRLVGLLDLQYVVNIPRLHRQLTILFLCGAAGAVAVLVFEGSKIVLWAGVAAYGLSNGPLCGYSSELYNRVAIHSDTGVAMVVFGMNTG-SMMPYVISWVWDETVWPPSLFVILAASHLVPLWLILNSRRVAESKENK 231
            F  +Y+IEF I   +FW+  G+ GA   LK+YV +TE     +  LLV  LW+A +IGRL G+ D +++  + RL+R  TILFL G   A A+LVF+ S  VLW G+AAYGL +GP  GY  +L NR+A  S+ G ++ + G N G S+ PYVISWVWD T WP  L +++  SHL+P   +LN++R+ E+ + +
Sbjct:  210 FFLKYKIEFHISGMLFWLFSGEVGAAGYLKRYVDETEVIGESHAELLVVVLWMAIIIGRLAGIQDQRHL-TLSRLYRHSTILFLGGTTAATAILVFQNSAFVLWTGIAAYGLCDGPTVGYCYDLNNRMATPSEMGTSVAMLGQNFGASIAPYVISWVWDYTDWPQILILVILLSHLLPYPFMLNAKRIDEANKRR 403          
BLAST of mRNA_H-elongata_contig4868.12029.1 vs. uniprot
Match: A0A836CPE2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.370e-45
Identity = 87/194 (44.85%), Postives = 118/194 (60.82%), Query Frame = 0
Query:   32 GSRWRAFCERYQIEFCIGATMFWIVGGKDGATSLLKKYVLDTEKSSGGNEHLLVEWLWLAFVIGRLVGLLDLQYVVNIPRLHRQLTILFLCGAAGAVAVLVFEGSKIVLWAGVAAYGLSNGPLCGYSSELYNRVAIHSDTGVAMVVFGMNTGS-MMPYVISWVWDETVWPPSLFVILAASHLVPLWLILNSRRV 224
            GS  R F   Y+IEF IG  +FW++GGK GAT+ L +YV DT         LL+  LWLA  +GR++G+   Q  + + +LH+Q   LF+ GAA A   LV   S   LW  VA YG  NGP  GY  +L NR+   S+TG+++V+FG+N GS  +P+ IS +WD T WP  LFV L  SHL+P   +L +RR+
Sbjct:  244 GSGLRGFVYLYRIEFTIGFMIFWLIGGKVGATAYLTQYVADTGIIPDARAPLLIAVLWLAITVGRILGI-QAQRTITLSKLHKQCAGLFIGGAAAAALPLVLLHSAAALWIAVALYGTLNGPCVGYCYDLNNRITFPSETGMSIVMFGLNCGSSFIPFAISGLWDATQWPSILFVFLVVSHLLPFPALLTARRL 436          
BLAST of mRNA_H-elongata_contig4868.12029.1 vs. uniprot
Match: H6WBB1_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB1_VAULI)

HSP 1 Score: 146 bits (369), Expect = 1.270e-37
Identity = 79/194 (40.72%), Postives = 117/194 (60.31%), Query Frame = 0
Query:   38 FCERYQIEFCIGATMFWIVGGKDGATSLLKKYVLDTEKSSGGNEHLLVEWLWLAFVIGRLVGLLDLQYVVNIPRLHRQLTILFLCGAAGAVAVLVFEGSKIVLWAGVAAYGLSNGPLCGYSSELYNRVAIHSDTGVAMVVFGMNTG-SMMPYVISWVWDETVWPPSLFVILAASHLVPL--WLILNSRRVAESK 228
            F   Y+IEFC+G  +FW++GGK GAT+ L +YV DT+  S      L+  LW+A  +GRL G+  +Q  + + RL     I FL GA GA   L+ + S + LW  VA YG  NGP  G+  +L NR  +  +TG+++V+FG+N G S +P+ IS +WD+   P  LF+++ ASHL+P    LI+ S   ++ K
Sbjct:  254 FVHNYRIEFCVGFMVFWLIGGKVGATAYLTQYVSDTDIISESQSAGLIAVLWMAITVGRLFGI-HIQRNIILSRLFFLTGIAFLGGAVGAFLPLILKTSILALWLSVAIYGFLNGPTVGFCYDLNNRTTMPCETGMSIVMFGLNCGASFIPFAISGIWDKFHTPSILFIVMVASHLLPYPAMLIMKSFHASQIK 446          
BLAST of mRNA_H-elongata_contig4868.12029.1 vs. uniprot
Match: A0A835ZG03_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG03_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.300e-28
Identity = 74/201 (36.82%), Postives = 106/201 (52.74%), Query Frame = 0
Query:   38 FCERYQIEFCIGATMFWIVGGKDGATSLLKKYVLDTEKSSGGNEHLLVEWLWLAFVIGRLVGLLDLQYVVNIPRLHRQLTILFLCGAAGAVAVLVFEGSKIVLWAGVAAYGLSNGPLCGYSSELYNRVAIHSDTGVAMVVFGMNTG-SMMPYVISWVWDETV---------WPPSLFVILAASHLVPLWLILNSRRVAESK 228
            F   Y+IE  +   +FW++GGK GAT+ L +YV DT   +     LL+  LW A  +GR VG+  LQ       L+ Q T+L + GAA A   L+F  S  VLW  VA +GL NGP  GY  +L NR    S+ G+++V+FG+N+G S++PY ++  W                +LF     SH +PL  +L  R +   K
Sbjct:  218 FVHEYRIELLVAFMVFWLIGGKVGATAYLTQYVEDTGVIAPACASLLIVVLWAAITLGRCVGI-HLQRDATPRALYAQTTLLCVAGAAAAALPLLFPSSAAVLWIAVALWGLFNGPSIGYCYDLNNRATAPSEVGMSVVMFGLNSGASLVPYALAAAWRGAAAAAGXXXXXXXRALFAFALVSHALPLPALLAVRALHRRK 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4868.12029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZ10_ECTSI6.640e-5851.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G4N2_ECTSI3.180e-4845.13Similar to sodium-dependent glucose transporter 1 ... [more]
A0A836CPE2_9STRA8.370e-4544.85Major facilitator superfamily domain-containing pr... [more]
H6WBB1_VAULI1.270e-3740.72Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A835ZG03_9STRA1.300e-2836.82Major facilitator superfamily domain-containing pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 41..224
e-value: 2.9E-11
score: 44.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..170
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 116..133
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 30..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4868contigH-elongata_contig4868:9881..10994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4868.12029.1mRNA_H-elongata_contig4868.12029.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4868 8857..11176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4868.12029.1 ID=prot_H-elongata_contig4868.12029.1|Name=mRNA_H-elongata_contig4868.12029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=257bp
MPLEIHTLCMQEIPEPVTMPTFQGGLKIRTIGSRWRAFCERYQIEFCIGA
TMFWIVGGKDGATSLLKKYVLDTEKSSGGNEHLLVEWLWLAFVIGRLVGL
LDLQYVVNIPRLHRQLTILFLCGAAGAVAVLVFEGSKIVLWAGVAAYGLS
NGPLCGYSSELYNRVAIHSDTGVAMVVFGMNTGSMMPYVISWVWDETVWP
PSLFVILAASHLVPLWLILNSRRVAESKENKDMSECETSTCLSDSEETGL
LDAIPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf