prot_H-elongata_contig48655.12027.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48655.12027.1
Unique Nameprot_H-elongata_contig48655.12027.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
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BLAST of mRNA_H-elongata_contig48655.12027.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 8.620e-26
Identity = 43/68 (63.24%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:    1 PDTVDYQVKELTDGNRVAVFFMCKQRDNGSNMGRRFANSSLFIKLIARECHRFGVTYSMPLQPITVGK 68
            PDTVD+Q+K LTDGNR++VF +C+QR+N +NMGRRF NSSLF KL+AREC+R G++Y++P QP+   K
Sbjct:  116 PDTVDFQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQK 183
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BLAST of mRNA_H-elongata_contig48655.12027.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.060e-24
Identity = 44/69 (63.77%), Postives = 59/69 (85.51%), Query Frame = 0 
Query:    1 PDTVDYQVKELTDGNRVAVFFMCKQRDNGSNMGRRFANSSLFIKLIARECHRFGVTYSMPLQPITVGKG 69
            PDTVDYQ+K LTDGNR++VF +C+QR+N +NMGRRF NS+LF KL+AREC+R G++Y++P QP+   KG
Sbjct:  942 PDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPLVAQKG 1010
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48655.12027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMN4_ECTSI8.620e-2663.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR3_9PHAE1.060e-2463.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48655contigH-elongata_contig48655:176..388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48655.12027.1mRNA_H-elongata_contig48655.12027.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48655 176..388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48655.12027.1 ID=prot_H-elongata_contig48655.12027.1|Name=mRNA_H-elongata_contig48655.12027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
PDTVDYQVKELTDGNRVAVFFMCKQRDNGSNMGRRFANSSLFIKLIAREC
HRFGVTYSMPLQPITVGKGDV
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