prot_H-elongata_contig48643.12024.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48643.12024.1
Unique Nameprot_H-elongata_contig48643.12024.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
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BLAST of mRNA_H-elongata_contig48643.12024.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.560e-5
Identity = 36/112 (32.14%), Postives = 52/112 (46.43%), Query Frame = 0 
Query:    4 DTAEDRAIMCDTEKPVTSYASR----------------QLRGVNIAIAPVTATPVLDLEA-------FMTESASTPLTDEVVRGDICAFISGGMKEIKQTDVTVQSILDFVP 92
            DT  +RAIMC T +PV  Y  R                +        +  +  P +++E        F   +A  P   E+ RGD+CAF+SGG+ E    +VTV+SIL F+P
Sbjct:  759 DTPANRAIMCSTREPVDVYGRRLSAHPEDRFPQLAQQMEAEDSEDENSEGSYEPRVEVEVGREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMP 870
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BLAST of mRNA_H-elongata_contig48643.12024.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 2.160e-5
Identity = 38/111 (34.23%), Postives = 51/111 (45.95%), Query Frame = 0 
Query:    4 DTAEDRAIMCDTEKPVTSYA--------SRQLRGVNIAIAPVTATPVLDLE--------------AFMTESASTPLTDEVVRGDICAFISGGMKEIKQTDVTVQSILDFVP 92
            DT E+R+IMC T  PV  Y         SR LR   I     +     D+E              +F  E+A  P + ++ R ++CAF+ G   E    DVTV+SIL FVP
Sbjct: 1103 DTPENRSIMCSTVMPVDVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVDREDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVP 1213
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48643.12024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LJP6_9PHAE1.560e-532.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI63_ECTSI2.160e-534.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48643contigH-elongata_contig48643:2197..2896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48643.12024.1mRNA_H-elongata_contig48643.12024.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48643 2067..2973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48643.12024.1 ID=prot_H-elongata_contig48643.12024.1|Name=mRNA_H-elongata_contig48643.12024.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MAADTAEDRAIMCDTEKPVTSYASRQLRGVNIAIAPVTATPVLDLEAFMT
ESASTPLTDEVVRGDICAFISGGMKEIKQTDVTVQSILDFVPEHGWNLSQ
CQRIRHVLGAYGKYFCR*
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