prot_H-elongata_contig48549.12013.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48549.12013.1
Unique Nameprot_H-elongata_contig48549.12013.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length276
Homology
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 239 bits (611), Expect = 2.270e-68
Identity = 132/304 (43.42%), Postives = 182/304 (59.87%), Query Frame = 0
Query:    5 PREDTPEVRRQRAGKLAHERGGITKAASALMSPPAAPQDNKTLTILRSKHPAEDPAEITTGKAQAEQRAGTNAVGE---QMQQQPDA-----------------------------ALCDELVEDLAEFSTLVFSSSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            PR+     +  RA  LAH+RGG++KAAS L++PP+ P++ +TL  LR KHP E   EI     +A  R      G    +  ++P A                             +L  EL E +A+  +++F  S LP  F  L+TSANLSA+G K R +  GD+ RR++G V CR+YG  L ++F+P GQYGVAV GG E++   + L  ++G  +L+YD  NAFNSM R  +LPALA++IP  +PYA N+YARE PKLL+  D  G+ V+ SA GVQQGCNLGPLCYS G LK+L++ R+
Sbjct: 1073 PRQGEEASKHARAEHLAHQRGGLSKAASTLLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSRIEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDS-GMAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRA 1375          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 7.030e-62
Identity = 132/305 (43.28%), Postives = 173/305 (56.72%), Query Frame = 0
Query:    8 DTPEVRRQRAGKLAHERGGITKAASALMSPPAAPQDNKTLTILRSKHPAEDPAEITTGKAQAEQRAGT-------NAVGE-------------------QMQQQPDA---------ALCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            DT + R++RA +LAHE GGITKAASAL+SP  +P++N TL  LR+ HP EDP +I T    + + AG        ++V E                   Q    PD           + D   E LA+FS  VF     LP  F  L+TSANLSALG+K R +  G VLRR+I   FCR+Y   + + F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NSM R  +LPA+A   P  V Y  N+YAR   KLLF ++ G +EVV S RGVQQGCNLG   +  G L I+KE  +
Sbjct:   36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDSVAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNN 340          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 5.120e-59
Identity = 131/305 (42.95%), Postives = 172/305 (56.39%), Query Frame = 0
Query:    8 DTPEVRRQRAGKLAHERGGITKAASALMSPPAAPQDNKTLTILRSKHPAEDPAEITTGKAQAEQRAGT-------NAVGE-------------------QMQQQPDA---------ALCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            DT + R++RA +LAHE GGITKAASAL+SP  +P++N TL  LR+ HP EDP +I T    + + AG        ++V E                   Q    PD           + D   E LA+FS  VF     LP  F  L+TSANLSALG+K R +  G VLRR+I   FC +Y   + + F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NSM R  +LPA+A   P  V Y  N+YAR   KLLF ++ G +EVV S RGVQQGCNLG   +  G L I+KE  +
Sbjct:   36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNN 340          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.880e-58
Identity = 132/305 (43.28%), Postives = 173/305 (56.72%), Query Frame = 0
Query:    8 DTPEVRRQRAGKLAHERGGITKAASALMSPPAAPQDNKTLTILRSKHPAEDPAEITTGKAQAEQRAGT-------NAVGE-------------------QMQQQPDA---------ALCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            DT + R++RA +LAHE GGITKAASAL+SP  +P++N TL  LR+ HP EDP +I T    + + AG        ++V E                   Q    PD           + D   E LA+FS  VF     LP  F  L+TSANLSALG+K R +  G VLRR+I   FCR+Y   + + F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NSM R  +LPA+A   P  V Y  N+YAR   KLLF ++ G +EVV S RGVQQGCNLG   +  G L I+KE  +
Sbjct:   36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNN 340          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 4.770e-58
Identity = 132/305 (43.28%), Postives = 173/305 (56.72%), Query Frame = 0
Query:    8 DTPEVRRQRAGKLAHERGGITKAASALMSPPAAPQDNKTLTILRSKHPAEDPAEITTGKAQAEQRAGT-------NAVGE-------------------QMQQQPDA---------ALCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            DT + R++RA +LAHE GGITKAASAL+SP  +P++N TL  LR+ HP EDP +I T    + + AG        ++V E                   Q    PD           + D   E LA+FS  VF     LP  F  L+TSANLSALG+K R +  G VLRR+I   FCR+Y   + + F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NSM R  +LPA+A   P  V Y  N+YAR   KLLF ++ G +EVV S RGVQQGCNLG   +  G L I+KE  +
Sbjct:   36 DTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNN 340          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 8.070e-45
Identity = 90/188 (47.87%), Postives = 117/188 (62.23%), Query Frame = 0
Query:   90 LCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            + D   E LA+FS  VF     LP  F  L+TSANLSALG+K R +  G VLRR+I   FCR+Y   + + F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NSM R  +LPA+A   P    Y  N+YAR   KLLF ++ G +EVV S RGVQQGCNLG   +  G L I+KE  +
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNN 188          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.930e-42
Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 0
Query:   90 LCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            + D   E LA+FS  VF     LP     L+TSANLSALG+K R +  G VLRR+I   F R+Y   + + F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NSM R  +LPA+A + P  V Y  N+YAR   KLLF ++ G +EVV S RGVQQGCNLG   +  G L I+KE  +
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNN 188          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.090e-38
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 0
Query:   90 LCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQ 254
            + D+  E LA+FS  VF     LP +F    TSA+LSALG+K R +  G VLRR+I   FCR+Y + + D F+   Q+G  V GGVEI+  T+ L  ++G +ILS+DG NA+NS+ R  +L A+A   P  V Y  NLYAR   KLLF ++ G +E+V S R VQQ
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.680e-21
Identity = 56/137 (40.88%), Postives = 80/137 (58.39%), Query Frame = 0
Query:   90 LCDELVEDLAEFSTLVFS-SSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVI------------GAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAFNSMYRHRVLPALA 213
            + D+    LA+FS  VF     LP +F  L+TSA+LSALG+K R +  G VLRR+I               FCR+Y + + D F+   Q+G  V GGVEI+  T+    ++G +ILS+DG NA+NS+ R  +L A+A
Sbjct:    1 MSDDFSATLADFSHKVFYYGDELPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAAPSHQQGSTILSFDGKNAYNSILRSSILTAVA 137          
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Match: A0A1D1VL73_RAMVA (Reverse transcriptase domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VL73_RAMVA)

HSP 1 Score: 70.5 bits (171), Expect = 4.680e-10
Identity = 61/192 (31.77%), Postives = 89/192 (46.35%), Query Frame = 0
Query:   92 DELVEDLAEFSTLVFSSSLLPQIFSTLNTSANLSALGQK---ARRVPCGDVLRRVIGAVFCRRYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCS----ILSYDGANAFNSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESARGVQQGCNLGPLCYSTGPLKILKEIRS 276
            +EL E LA   T++ S  +   I   L   A+L+AL +K    R +  G  LRR+ G +  +R    + +  +P  Q G    GG E     + L      +    +L  D  NAFN++YR R+L  + E +P     A  LY R    L F     G +++ SAR VQQG  LGPL +     K+ K + S
Sbjct:  258 NELTEALAGLMTIMLSGKVPADICPFLY-GASLTALKKKDGGIRPIAVGSTLRRIAGKIVSKRVMLSMGELLRP-EQVGYGTRGGAEAAVHAARLFVSSNTNDCQVLLKLDFKNAFNTVYRERLLSEVRETLPDYYASAHQLY-RHPSNLFF-----GEKLLSSARCVQQGDPLGPLFFCHVTRKLSKSLVS 441          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48549.12013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN2.270e-6843.42Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE7.030e-6243.28Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE5.120e-5942.95Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE1.880e-5843.28Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE4.770e-5843.28Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE8.070e-4547.87Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE1.930e-4247.34Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE3.090e-3846.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQE6_9PHAE8.680e-2140.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A1D1VL73_RAMVA4.680e-1031.77Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48549contigH-elongata_contig48549:271..1245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48549.12013.1mRNA_H-elongata_contig48549.12013.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48549 271..1245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48549.12013.1 ID=prot_H-elongata_contig48549.12013.1|Name=mRNA_H-elongata_contig48549.12013.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp
SRQKPREDTPEVRRQRAGKLAHERGGITKAASALMSPPAAPQDNKTLTIL
RSKHPAEDPAEITTGKAQAEQRAGTNAVGEQMQQQPDAALCDELVEDLAE
FSTLVFSSSLLPQIFSTLNTSANLSALGQKARRVPCGDVLRRVIGAVFCR
RYGRKLVDYFQPWGQYGVAVSGGVEIMTLTSILGFEEGCSILSYDGANAF
NSMYRHRVLPALAEIIPSGVPYAANLYARESPKLLFALDGGGVEVVESAR
GVQQGCNLGPLCYSTGPLKILKEIRS
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