prot_H-elongata_contig48511.12010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48511.12010.1
Unique Nameprot_H-elongata_contig48511.12010.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig48511.12010.1 vs. uniprot
Match: A0A6H5K5F4_9PHAE (AAA_16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F4_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.820e-42
Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 0
Query:   14 DVPLPLDGLIARWPGRTQQINELAGLIGEPGDGVPVPPLLVTGPPCCGKTGVVRAVLDHRGCQYVHVNCAEVVRRKGLLEAVVEQVAGGSR 104
            D  +PL GL  RWPGR Q+I+ELAGLIGE  DGVPVPPLLVTGPPC GKT VVRAVLDHRGC Y +VNCAEVV+R+ LLEA+VEQVAGGSR
Sbjct:   55 DALVPLAGLEERWPGRKQEISELAGLIGESTDGVPVPPLLVTGPPCTGKTSVVRAVLDHRGCSYAYVNCAEVVQRRDLLEALVEQVAGGSR 145          
BLAST of mRNA_H-elongata_contig48511.12010.1 vs. uniprot
Match: D7FZ80_ECTSI (Putative Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ80_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 2.740e-41
Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0
Query:   13 GDVPLPLDGLIARWPGRTQQINELAGLIGEPGDGVPVPPLLVTGPPCCGKTGVVRAVLDHRGCQYVHVNCAEVVRRKGLLEAVVEQVAGGSR 104
            GD  +PL GL  RWPGR Q+I+ELAGLIGE  DGVPVPPLLVTGPPC GKT VVRAVLDHRGC Y +VNCAEVV+R+ LLE +VEQVAGGSR
Sbjct:   98 GDALVPLAGLEERWPGRKQEISELAGLIGESTDGVPVPPLLVTGPPCTGKTSVVRAVLDHRGCSYAYVNCAEVVQRRDLLEVLVEQVAGGSR 189          
BLAST of mRNA_H-elongata_contig48511.12010.1 vs. uniprot
Match: A0A836CAU5_9STRA (Origin recognition complex subunit 5 C-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.210e-14
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   13 GDVPLPLDGLIARWPGRTQQINELAGLIGEPGDGVPVPPLLVTGPPCCGKTGVVRAVLDHRGCQYVHVNCAEVVRRKGLLEAVVEQVAGGSR 104
            G  P  LD L +RW  R  Q  +LAGL+G  G   P  P++V GPPC GK+G +R VL+   C Y  V+C + +  + L++AVVEQ+    R
Sbjct:   81 GITPQGLDRLGSRWLARGPQFQQLAGLMG--GAAEPCVPIIVQGPPCTGKSGAIRDVLEESSCPYTLVDCKQALSLRQLMQAVVEQLVSSKR 170          
BLAST of mRNA_H-elongata_contig48511.12010.1 vs. uniprot
Match: A0A388K8H4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K8H4_CHABU)

HSP 1 Score: 58.5 bits (140), Expect = 9.090e-8
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0
Query:   22 LIARWPGRTQQINELAGLIGEPGDGVPVPPLLVTGPPCCGKTGVVRAVLDHRGCQYVHVNCAEVVRRKGLLEAVVEQVAGGSR 104
            L   +PGR +Q++EL GLIGEPGD  P  P+LV G    GKT +VR  +      +  V+C      + L E+V+ Q+ G  R
Sbjct:  122 LSTAYPGRARQVDELLGLIGEPGD--PTAPILVYGGAATGKTTLVRDTMRLLARPHAFVSCRSSYNARLLFESVLNQLLGHVR 202          
BLAST of mRNA_H-elongata_contig48511.12010.1 vs. uniprot
Match: A0A6A7FT33_9CRUS (Origin recognition complex subunit 5-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FT33_9CRUS)

HSP 1 Score: 53.5 bits (127), Expect = 4.680e-6
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0
Query:   14 DVPLPLDGLIARWPGRTQQINELAGLIGEPGDGVPVPPLLVTGPPCCGKTGVVRAVLDHRGCQYVHVNCAEVVRRKGLLEAVVEQVAGGS 103
            D+   +  L A  P R +QI+ LAGLIGEPG  +P   + V G   CGK+ VV  VL  +   +   NC E+  ++ L + VV +  G S
Sbjct:   11 DMDEKIVALKAELPCREEQIDLLAGLIGEPGWSLPSC-IYVYGYSGCGKSSVVEGVLKAKEVIFCTANCVEIYTQQLLYQTVVNKFTGWS 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48511.12010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K5F4_9PHAE1.820e-4278.02AAA_16 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FZ80_ECTSI2.740e-4177.17Putative Mn/Fe superoxide dismutase n=1 Tax=Ectoca... [more]
A0A836CAU5_9STRA1.210e-1442.39Origin recognition complex subunit 5 C-terminus-do... [more]
A0A388K8H4_CHABU9.090e-839.76Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A6A7FT33_9CRUS4.680e-637.78Origin recognition complex subunit 5-like (Fragmen... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041664Orc1-like, AAA ATPase domainPFAMPF13191AAA_16coord: 25..80
e-value: 6.1E-8
score: 33.2
NoneNo IPR availableGENE3D3.40.50.300coord: 26..104
e-value: 2.0E-8
score: 36.2
IPR020796Origin recognition complex, subunit 5PANTHERPTHR12705ORIGIN RECOGNITION COMPLEX SUBUNIT 5coord: 19..101
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48511contigH-elongata_contig48511:190..2432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48511.12010.1mRNA_H-elongata_contig48511.12010.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48511 190..2432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48511.12010.1 ID=prot_H-elongata_contig48511.12010.1|Name=mRNA_H-elongata_contig48511.12010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MEEREEKVGEDQGDVPLPLDGLIARWPGRTQQINELAGLIGEPGDGVPVP
PLLVTGPPCCGKTGVVRAVLDHRGCQYVHVNCAEVVRRKGLLEAVVEQVA
GGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041664AAA_16
IPR020796ORC5
IPR027417P-loop_NTPase