prot_H-elongata_contig48458.11997.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig48458.11997.1
Unique Name	prot_H-elongata_contig48458.11997.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	101

Homology

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 6.140e-45
Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKPLN 100
            FAW+ TARWLGFR+D++V+++L ASCFFSVA+NEYS+SIDAGLLGAALVYV+QLGGLFQW VRQAAE ENQMVSAERVL YCRVPQEA L+S+P  KP +
Sbjct:  990 FAWVYTARWLGFRMDMVVIIVLAASCFFSVAVNEYSNSIDAGLLGAALVYVLQLGGLFQWAVRQAAEVENQMVSAERVLSYCRVPQEASLESDPGYKPAD 1089

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.140e-44
Identity = 78/100 (78.00%), Postives = 90/100 (90.00%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKPLN 100
            FAW+ TARWLGFR+D++V+++L ASCFFSVA+NEYSSS+DAGLLGAA+VYV+QLGGLFQW VRQAAE ENQMVSAERVL YCRVPQEA L SEP  KP +
Sbjct: 1040 FAWVYTARWLGFRMDMVVIIVLTASCFFSVAVNEYSSSVDAGLLGAAMVYVLQLGGLFQWAVRQAAEVENQMVSAERVLSYCRVPQEAALASEPVYKPAD 1139

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.150e-44
Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKPLN 100
            FAW+ TARWLGFR+D++V+++L ASCFFSVA NEYS S+DAGLLGAALVYV+QLGGLFQW+VRQ+AE ENQMVSAERVLGYCRVPQEA L+SEP  KP +
Sbjct: 1091 FAWMYTARWLGFRMDMVVIIVLAASCFFSVAANEYSDSVDAGLLGAALVYVLQLGGLFQWSVRQSAEVENQMVSAERVLGYCRVPQEASLESEPGCKPAD 1190

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.130e-44
Identity = 77/98 (78.57%), Postives = 89/98 (90.82%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKP 98
            FAW+ TARWLGFR+D++V+++L ASCFFSVA+NEYSSS+DAGLLGAALVYV+QLGGLFQW VRQAAE ENQMVS ERVL YCRVPQEA L+SEP  +P
Sbjct: 1071 FAWVYTARWLGFRMDMVVIIVLTASCFFSVAVNEYSSSVDAGLLGAALVYVLQLGGLFQWAVRQAAEVENQMVSVERVLSYCRVPQEASLESEPGYQP 1168

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.350e-28
Identity = 55/88 (62.50%), Postives = 71/88 (80.68%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEA 88
            +A++ T RWLG  LD++V+V+L A+ FFSVA++E+ S I+ G LGAAL YVIQLGGLFQW VRQ+AE ENQ++S ER+L YC V QEA
Sbjct: 1360 YAFLFTGRWLGLWLDMVVLVLLAATAFFSVAVDEFGSGINPGYLGAALAYVIQLGGLFQWAVRQSAEVENQIISVERILQYCEVEQEA 1447

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A7S4DD06_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD06_HETAK)

HSP 1 Score: 112 bits (281), Expect = 1.030e-27
Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 0

Query:    8 RWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKP 98
            RWLGF LD++VV+++ ++ F SVA NE  S I  GLLGAAL YV+ L GLFQW+VRQ+AE ENQMVS ERVL YCR PQE  L+S P   P
Sbjct:    1 RWLGFWLDMLVVLMIGSAAFVSVAANELYSEIPGGLLGAALTYVVLLAGLFQWSVRQSAEVENQMVSVERVLAYCRAPQEPPLESAPGKAP 91

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A7S3Y5Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z6_HETAK)

HSP 1 Score: 112 bits (281), Expect = 1.310e-27
Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 0

Query:    8 RWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKP 98
            RWLGF LD++VV+++ ++ F SVA NE  S I  GLLGAAL YV+ L GLFQW+VRQ+AE ENQMVS ERVL YCR PQE  L+S P   P
Sbjct:    1 RWLGFWLDMLVVLMIGSAAFVSVAANELYSEIPGGLLGAALTYVVLLAGLFQWSVRQSAEVENQMVSVERVLAYCRAPQEPPLESAPGKAP 91

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 3.950e-24
Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0

Query:   40 DAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKPLN 100
            DAGLLGAALVYV+QLGGLFQW+VRQ+AE ENQMVSAERVLGYC+VPQEA L+SEP  KP +
Sbjct:   14 DAGLLGAALVYVLQLGGLFQWSVRQSAEVENQMVSAERVLGYCKVPQEASLESEPGCKPAD 74

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A7R9YEW1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEW1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 7.820e-23
Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSS--SIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEA 88
            F++I   RW GF+LDLIVV +L A+ +FSV +    +  ++D  LLG ALVY++QL GLFQW VRQ+AE ENQM+S ER++ Y ++PQEA
Sbjct:  231 FSFIGLNRWFGFQLDLIVVTLLAAAAYFSVVLKHVDTGYTVDGALLGTALVYILQLAGLFQWMVRQSAEVENQMISTERLVAYTKLPQEA 320

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BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Match: A0A7R9ZKD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKD5_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.190e-22
Identity = 47/94 (50.00%), Postives = 68/94 (72.34%), Query Frame = 0

Query:    1 FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYS-SSIDAGLLGAALVYVIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSE 93
            F +I+++RWLGFR+D +VV++L  S F +V  +++    ID  L+G AL  +I L GLFQWTVRQ+AE  NQM+S ERV GY ++P EA +++E
Sbjct:    7 FIFIASSRWLGFRMDGLVVILLIVSSFLAVVFHDFGWFEIDPALVGLALSLLIMLAGLFQWTVRQSAEIVNQMISVERVAGYTQLPSEAPVETE 100

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot

BLAST of mRNA_H-elongata_contig48458.11997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JDL0_9PHAE	6.140e-45	78.00	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LSW3_ECTSI	1.140e-44	78.00	Multidrug resistance-associated protein-like prote...	[more]
A0A6H5JDN6_9PHAE	1.150e-44	78.00	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LSW4_ECTSI	2.130e-44	78.57	Multidrug resistance-associated protein-like prote...	[more]
A0A835YMC7_9STRA	8.350e-28	62.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S4DD06_HETAK	1.030e-27	62.64	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3Y5Z6_HETAK	1.310e-27	62.64	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
D8LSW5_ECTSI	3.950e-24	81.97	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A7R9YEW1_9STRA	7.820e-23	54.44	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7R9ZKD5_9STRA	6.190e-22	50.00	Hypothetical protein (Fragment) n=1 Tax=Craspedost...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10		coord: 2..89 e-value: 1.3E-5 score: 26.5
IPR036640	ABC transporter type 1, transmembrane domain superfamily	SUPERFAMILY	90123	ABC transporter transmembrane region	coord: 3..87
None	No IPR available	PANTHER	PTHR24223	FAMILY NOT NAMED	coord: 1..96
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 63..101
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	TMHMM	TMhelix		coord: 41..58
None	No IPR available	TMHMM	TMhelix		coord: 9..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig48458	contig	H-elongata_contig48458:914..2934 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig48458.11997.1	mRNA_H-elongata_contig48458.11997.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig48458 914..2936 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig48458.11997.1 ID=prot_H-elongata_contig48458.11997.1|Name=mRNA_H-elongata_contig48458.11997.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
FAWISTARWLGFRLDLIVVVILFASCFFSVAINEYSSSIDAGLLGAALVY
VIQLGGLFQWTVRQAAETENQMVSAERVLGYCRVPQEAKLDSEPENKPLN
E

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036640	ABC1_TM_sf