prot_H-elongata_contig48431.11996.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48431.11996.1
Unique Nameprot_H-elongata_contig48431.11996.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A6H5JW07_9PHAE (UTP15_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW07_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.360e-65
Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 0
Query:   25 DVETKVWDVLGGG--RLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGG--------GGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            +V+  VWD+LGGG  RLLHTL+NHQKTVTCLALDGTG+RLLTGGLDR VKIYNL++FKVVHMLKYQAPVL LALAPDNS+L+A+TTDRALTIRRRDLRHAAALA  E A+ G         GGPR VRTGT RYFNRGK+EGA E DVKV
Sbjct:  228 EVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKVVHMLKYQAPVLALALAPDNSSLVAATTDRALTIRRRDLRHAAALAEREMAKSGRIGGPVGSDGGPRSVRTGTARYFNRGKTEGAGEGDVKV 377          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A482RLW1_9ARCH (UTP15_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RLW1_9ARCH)

HSP 1 Score: 134 bits (337), Expect = 4.030e-35
Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 0
Query:   18 GGVVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            G +++      ++WDV+GGGR LHT SNHQK +T + LDGTGTRLLTG LD  VK+Y + +F V H ++Y AP+L +A++PDNS LI   TD  LTI++R ++ +  +   ++AR        +R GT RYF RG+S  A  DD+++
Sbjct:   17 GTMLTAGGNYVRLWDVVGGGRCLHTFSNHQKLITTMCLDGTGTRLLTGSLDGLVKVYEVSTFGVTHTMRYDAPILSMAISPDNSRLIVGCTDDTLTIKQRMVKVSELVTERKSAR-------LLRGGTYRYFLRGQSTAAAVDDIRI 156          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A433QWU1_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QWU1_9FUNG)

HSP 1 Score: 130 bits (326), Expect = 2.560e-32
Identity = 72/165 (43.64%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    2 LNRRHRGLFISYLVFRGG--VVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            +N  H        +F GG  VVS      K+WD+L GGRL+++LSNHQKT+T L  DG+ +RLLTG LD+ VK+YN+  +KVVH +KY APVL +AL+PD++ L+A  T   L+IR+R +R A  +A  +           ++ GT +YF RG++    +DD KV
Sbjct:  215 MNMNHGAPIEDVSMFPGGGVVVSAGGPTLKIWDLLSGGRLMNSLSNHQKTITSLCFDGSYSRLLTGSLDQHVKVYNVQDYKVVHSVKYPAPVLSVALSPDDTHLVAGMTGGLLSIRQRQVR-ATEIATRQVEED------YIQGGTYKYFVRGQNNVGAQDDFKV 372          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A162PPB7_PHYB8 (UTP15_C domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162PPB7_PHYB8)

HSP 1 Score: 129 bits (325), Expect = 2.940e-32
Identity = 69/165 (41.82%), Postives = 105/165 (63.64%), Query Frame = 0
Query:    2 LNRRHRGLFISYLVFRGG--VVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            +  RH     S L++ GG  VVS      KVWD+L GGR +H +SNHQKT+T +  DG+ +RL+TG LD+ VK+YN+  +KVVH +KY APVL +AL+P+++ L+A   +  L+IR+R ++ + ++   +           +R GT +YF RG++ GAE+DD  V
Sbjct:  201 MTMRHGAPVESVLMYPGGGAVVSAGGPTLKVWDLLSGGRCMHEVSNHQKTITSMCFDGSASRLITGSLDQHVKVYNVQDYKVVHSVKYPAPVLSVALSPNDTHLVAGMANGLLSIRQRQVKSSESVTKKKQQE-------YIRDGTYKYFMRGQT-GAEQDDFAV 357          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A8H7BQN6_9FUNG (SnoRNA-binding rRNA-processing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BQN6_9FUNG)

HSP 1 Score: 129 bits (325), Expect = 2.970e-32
Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    2 LNRRHRGLFISYLVFRGG--VVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            +  +H     S L+F GG  VVS      KVWD+L GGR +H +SNHQKT+T L  DG+ +RL+TG LD  VKIYN+  +KVVH +KY APVL +AL+PD++ L+    +  L+IR+R ++ +   A  +           VR GT +YF RG+S    +DD  +
Sbjct:  201 MTMKHGAPVESVLMFPGGGAVVSAGGPTLKVWDLLAGGRCMHAISNHQKTITSLCFDGSASRLVTGSLDHHVKIYNVQDYKVVHSVKYPAPVLSVALSPDDTHLVTGMANSLLSIRQRQVKASEMAAKKQKQE-------YVRGGTYKYFTRGQSGMGAQDDFMI 358          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A433PXW0_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PXW0_9FUNG)

HSP 1 Score: 130 bits (327), Expect = 4.820e-32
Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 0
Query:    2 LNRRHRGLFISYLVFRGG--VVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHA--AALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            +  RH       ++F GG   VS      +VWD+L GGR++H+LSNHQKT+T L  DG+ +RLLTG LD+ VK+YN+  +KVVH  KY APVL +AL+PD++ L+A  T   L+IR+R +R A  A   V E           +R GT R+F RG++    +DD KV
Sbjct:  215 MTMRHDAPVEDVVMFPGGGVAVSAGGPRLRVWDLLSGGRVVHSLSNHQKTITSLCFDGSSSRLLTGSLDQHVKVYNVQDYKVVHSAKYPAPVLSVALSPDDTHLVAGMTGGLLSIRQRQVRTAEIATRQVEEDY---------IRGGTYRHFVRGQNNVGVQDDFKV 372          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A0L0FNH1_9EUKA (UTP15_C domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNH1_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 1.880e-31
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 0
Query:   14 LVFRGG--VVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            L+F GG  VVS      KVWD+L GGR++H+ SNHQKTVT L  DG+  RLL+G LD  VKIY++ ++KVVH +KY APV+ LA++P+++ L+    D  L+IR     H    ++T     G    +  R GT +YF RG+   A EDD +V
Sbjct:  215 LMFPGGGMVVSCGGNTIKVWDMLMGGRMVHSFSNHQKTVTSLGFDGSSNRLLSGSLDHHVKIYDVKNYKVVHSIKYSAPVMSLAMSPEDTHLVVGMADGTLSIR-----HKPNKSITNKGLAGDKAKKAPRGGTQQYFKRGQDTKASEDDFRV 362          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A4P9VUV1_9FUNG (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VUV1_9FUNG)

HSP 1 Score: 124 bits (311), Expect = 8.950e-31
Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    2 LNRRHRGLFISYLVFRGG--VVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            +   H+    S L+F GG  V S    + K+WD+LGGGRLL  +S+HQK +TC++ DGT TR+LTG LD  VK+ N+  +KVVH +KY  PV  LA++PD++ L    +   L+IR+R ++ A   A  + A         +R GT ++F RG +   E+ D+++
Sbjct:  172 ITMEHKFPVESVLIFPGGGLVASAGGNQLKIWDILGGGRLLQAVSHHQKAITCMSFDGTATRILTGSLDHHVKVLNIQDYKVVHSIKYPDPVQSLAVSPDDTHLAVGMSTGLLSIRQRVVKAADKAAAQQKA---------LRGGTRQFFTRGAAHRPEDSDLQI 327          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: A0A0D2UI43_CAPO3 (U3 small nucleolar RNA-associated protein 15 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UI43_CAPO3)

HSP 1 Score: 125 bits (314), Expect = 1.130e-30
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 0
Query:    1 TLNRRHRGLFISYLVFRGGVVSLP--DVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            T++  H       L F GG ++L     + KVWDVL GGRLL T SNHQKT+T + LD  G RLLT  LD+ VKI+++  + V H +KY AP+L ++L+PD++ L+    +  L+IR R ++ A  +   ++ R        VR GT RYF RGK+    +DD KV
Sbjct:  230 TMSMNHGAPVEQILFFPGGGLALSAGSNQIKVWDVLAGGRLLQTFSNHQKTITSMCLDSQGKRLLTASLDQHVKIHDVTDYSVTHSIKYTAPILSMSLSPDDTHLVVGMANGLLSIRHRAVKTAEVVRQLKSERA-------VRGGTYRYFVRGKTHQPSQDDFKV 388          
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Match: S2JCM0_MUCC1 (UTP15_C domain-containing protein n=7 Tax=Mucoraceae TaxID=34489 RepID=S2JCM0_MUCC1)

HSP 1 Score: 123 bits (309), Expect = 4.670e-30
Identity = 65/147 (44.22%), Postives = 96/147 (65.31%), Query Frame = 0
Query:   18 GGVVSLPDVETKVWDVLGGGRLLHTLSNHQKTVTCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDNSALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFNRGKSEGAEEDDVKV 164
            G V+S      KVWD+L GGR +HTL NHQKTVT +  DG+ +RL+TG LD+ VKIY++  +KVVH +KY AP+L + L+PD++ L A  ++  L+IR+R ++ A+  A+ +  +        +R GT +YF RG+S  A +DD  V
Sbjct:  219 GAVISSGGPVIKVWDLLSGGRCMHTLGNHQKTVTSMCFDGSTSRLVTGSLDQHVKIYDVQDYKVVHSVKYPAPILSVGLSPDDTHLAAGMSNGLLSIRQRQIK-ASEKAIKKQNQD------YIRAGTYKYFMRGQSNTAAKDDFVV 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48431.11996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW07_9PHAE1.360e-6576.67UTP15_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A482RLW1_9ARCH4.030e-3545.58UTP15_C domain-containing protein n=1 Tax=archaeon... [more]
A0A433QWU1_9FUNG2.560e-3243.64WD40-repeat-containing domain protein n=1 Tax=Jimg... [more]
A0A162PPB7_PHYB82.940e-3241.82UTP15_C domain-containing protein n=1 Tax=Phycomyc... [more]
A0A8H7BQN6_9FUNG2.970e-3242.42SnoRNA-binding rRNA-processing protein n=1 Tax=Apo... [more]
A0A433PXW0_9FUNG4.820e-3244.31WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
A0A0L0FNH1_9EUKA1.880e-3145.10UTP15_C domain-containing protein n=1 Tax=Sphaerof... [more]
A0A4P9VUV1_9FUNG8.950e-3139.39WD40-repeat-containing domain protein (Fragment) n... [more]
A0A0D2UI43_CAPO31.130e-3041.57U3 small nucleolar RNA-associated protein 15 n=1 T... [more]
S2JCM0_MUCC14.670e-3044.22UTP15_C domain-containing protein n=7 Tax=Mucorace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 36..75
e-value: 7.4E-8
score: 42.1
coord: 78..116
e-value: 18.0
score: 9.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 37..75
e-value: 2.0E-6
score: 28.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 43..84
score: 12.146
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 21..145
e-value: 1.2E-16
score: 62.7
NoneNo IPR availablePANTHERPTHR19924FAMILY NOT NAMEDcoord: 19..162
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.463
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 25..84
score: 11.84
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 29..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48431contigH-elongata_contig48431:3319..4097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48431.11996.1mRNA_H-elongata_contig48431.11996.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48431 3319..4097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48431.11996.1 ID=prot_H-elongata_contig48431.11996.1|Name=mRNA_H-elongata_contig48431.11996.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
TLNRRHRGLFISYLVFRGGVVSLPDVETKVWDVLGGGRLLHTLSNHQKTV
TCLALDGTGTRLLTGGLDRQVKIYNLDSFKVVHMLKYQAPVLYLALAPDN
SALIASTTDRALTIRRRDLRHAAALAVTEAARGGGGGPRRVRTGTVRYFN
RGKSEGAEEDDVKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf