prot_H-elongata_contig48400.11993.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48400.11993.1
Unique Nameprot_H-elongata_contig48400.11993.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: D7FRX3_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRX3_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 6.180e-17
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGAIQEV-----VVPTMACEVIDRAIQAHGGMGVCQD 50
            QSRLLVQDCAAKLE  GL GAIQEV     VVP MAC VIDRAIQ  GG+GVCQD
Sbjct:  313 QSRLLVQDCAAKLEAFGLQGAIQEVSMIKVVVPNMACRVIDRAIQMQGGLGVCQD 367          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: A0A836C9V4_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.970e-11
Identity = 36/56 (64.29%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLG-LSGAIQEV-----VVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+R LV DCA KLE  G   GA+ EV     VVP +AC VIDRAIQ HGGMGVCQD
Sbjct:  317 QARHLVLDCARKLERSGGAKGAMMEVAMIKVVVPNVACAVIDRAIQVHGGMGVCQD 372          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: A0A1Y2BXU1_9FUNG (Acyl-CoA dehydrogenase NM domain-like protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BXU1_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 3.010e-10
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGAIQEV-----VVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLLV D A K++ LG   A++E+     +VP MAC VIDRAIQAHGG GV QD
Sbjct:  228 QARLLVLDAADKIDKLGAKAALKEIGMAKIIVPQMACRVIDRAIQAHGGGGVSQD 282          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: A0A7V8TV12_9GAMM (Acyl-CoA dehydrogenase family protein n=1 Tax=Ectothiorhodospiraceae bacterium WFHF3C12 TaxID=1914406 RepID=A0A7V8TV12_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 2.940e-9
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGAIQEV-----VVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLL  + A  ++T+G   A +E+     V PTM C V+DRAIQAHGGMGVCQD
Sbjct:  310 QARLLTLNAAHMMDTVGNKVARREIAMIKAVAPTMVCNVLDRAIQAHGGMGVCQD 364          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: UPI0009E3ACDD (acyl-CoA dehydrogenase family member 11-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3ACDD)

HSP 1 Score: 59.7 bits (143), Expect = 4.070e-9
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGA-----IQEVVVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLLV   A  ++TLG   A     I ++ VP MAC+VIDRAIQ HGG GVCQD
Sbjct:  487 QARLLVLKAAHIIDTLGNKAARKQIAIAKIAVPRMACDVIDRAIQVHGGKGVCQD 541          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: UPI0016749DBD (acyl-CoA dehydrogenase family protein n=1 Tax=Streptosporangium violaceochromogenes TaxID=46188 RepID=UPI0016749DBD)

HSP 1 Score: 59.3 bits (142), Expect = 5.510e-9
Identity = 31/55 (56.36%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGAIQE-----VVVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLL    A  ++T+G   A  E     VV P MACEVIDRAIQ HGGMGVC D
Sbjct:  309 QARLLTLKAAWMIDTVGAKAAAAEISAVKVVAPRMACEVIDRAIQIHGGMGVCDD 363          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: UPI000E5D1898 (acyl-CoA dehydrogenase family protein n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5D1898)

HSP 1 Score: 58.9 bits (141), Expect = 7.560e-9
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGAIQE-----VVVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLL    A+ ++T+G   A +E     VV P MAC+VIDRAIQ HGG GVCQD
Sbjct:  314 QARLLTLKAASMMDTVGNKAARREIAMIKVVAPQMACDVIDRAIQVHGGAGVCQD 368          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: A0A0A0J9L0_9MICO (Acyl-CoA dehydrogenase n=4 Tax=Intrasporangiaceae TaxID=85021 RepID=A0A0A0J9L0_9MICO)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGAIQEV-----VVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLLV   A KL+T+G  GA+ EV     VVP MAC+VID AIQ HGG G+ +D
Sbjct:  326 QARLLVHHAAWKLDTVGAWGAMSEVSEIKAVVPQMACDVIDMAIQLHGGAGMSED 380          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: A0A3M6UEU8_POCDA (Uncharacterized protein (Fragment) n=5 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6UEU8_POCDA)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGA-----IQEVVVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLLV + A  ++ LG   A     + ++VVP MAC VIDRAIQ HGG GVCQD
Sbjct:  470 QARLLVLNAAYNIDKLGNKAAKNQIAMAKIVVPRMACNVIDRAIQIHGGKGVCQD 524          
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Match: A0A2B4S5J7_STYPI (Acyl-CoA dehydrogenase family member 11 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S5J7_STYPI)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 QSRLLVQDCAAKLETLGLSGA-----IQEVVVPTMACEVIDRAIQAHGGMGVCQD 50
            Q+RLLV + A  ++ LG   A     + ++VVP MAC VIDRAIQ HGG GVCQD
Sbjct:  697 QARLLVLNAAHNIDRLGNKAAKNQIAMAKIVVPRMACNVIDRAIQIHGGKGVCQD 751          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48400.11993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX3_ECTSI6.180e-1776.36Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836C9V4_9STRA4.970e-1164.29Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
A0A1Y2BXU1_9FUNG3.010e-1058.18Acyl-CoA dehydrogenase NM domain-like protein n=1 ... [more]
A0A7V8TV12_9GAMM2.940e-954.55Acyl-CoA dehydrogenase family protein n=1 Tax=Ecto... [more]
UPI0009E3ACDD4.070e-956.36acyl-CoA dehydrogenase family member 11-like isofo... [more]
UPI0016749DBD5.510e-956.36acyl-CoA dehydrogenase family protein n=1 Tax=Stre... [more]
UPI000E5D18987.560e-954.55acyl-CoA dehydrogenase family protein n=1 Tax=Algi... [more]
A0A0A0J9L0_9MICO1.040e-856.36Acyl-CoA dehydrogenase n=4 Tax=Intrasporangiaceae ... [more]
A0A3M6UEU8_POCDA1.040e-854.55Uncharacterized protein (Fragment) n=5 Tax=Pocillo... [more]
A0A2B4S5J7_STYPI1.040e-854.55Acyl-CoA dehydrogenase family member 11 n=1 Tax=St... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.140.10coord: 1..50
e-value: 1.2E-5
score: 27.0
IPR036250Acyl-CoA dehydrogenase-like, C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48400contigH-elongata_contig48400:540..1215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48400.11993.1mRNA_H-elongata_contig48400.11993.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48400 540..1215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48400.11993.1 ID=prot_H-elongata_contig48400.11993.1|Name=mRNA_H-elongata_contig48400.11993.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
QSRLLVQDCAAKLETLGLSGAIQEVVVPTMACEVIDRAIQAHGGMGVCQD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036250AcylCo_DH-like_C