prot_H-elongata_contig48370.11987.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig48370.11987.1
Unique Name	prot_H-elongata_contig48370.11987.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	59

Homology

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: D7FJK2_ECTSI (Similar to ribosomal protein S29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.380e-30
Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTK 54
            MGSKALVNSHPK FGKGGR CRVCSNQHGLIRKYGL MCRQCFRVYA +IGFTK
Sbjct:   43 MGSKALVNSHPKSFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVYATEIGFTK 96

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: A0A3P9IV47_ORYLA (40S ribosomal protein S29 n=3 Tax=Oryzias TaxID=8089 RepID=A0A3P9IV47_ORYLA)

HSP 1 Score: 102 bits (253), Expect = 2.500e-27
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVRE 57
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR 
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVRS 57

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: A0A3B3DEW7_ORYME (40S ribosomal protein S29 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3DEW7_ORYME)

HSP 1 Score: 102 bits (253), Expect = 3.770e-27
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVRE 57
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR 
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVRS 57

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: L7N1Q0_MYOLU (40S ribosomal protein S29 n=2 Tax=Amniota TaxID=32524 RepID=L7N1Q0_MYOLU)

HSP 1 Score: 101 bits (251), Expect = 4.010e-27
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVR 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKVR 56

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: M3Y0Q0_MUSPF (40S ribosomal protein S29 n=14 Tax=cellular organisms TaxID=131567 RepID=M3Y0Q0_MUSPF)

HSP 1 Score: 101 bits (251), Expect = 4.550e-27
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVR 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR
Sbjct:    6 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKVR 61

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: UPI00090E0E50 (Uncharacterized protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=UPI00090E0E50)

HSP 1 Score: 101 bits (252), Expect = 4.930e-27
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKV 55
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGFTKV
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFTKV 55

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: G5BW63_HETGA (40S ribosomal protein S29 n=2 Tax=Rodentia TaxID=9989 RepID=G5BW63_HETGA)

HSP 1 Score: 101 bits (251), Expect = 5.190e-27
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVR 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKVR 56

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: A0A4D9E7Q6_9SAUR (40S ribosomal protein S29 n=1 Tax=Platysternon megacephalum TaxID=55544 RepID=A0A4D9E7Q6_9SAUR)

HSP 1 Score: 101 bits (251), Expect = 5.330e-27
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVR 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKVR 56

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: A0A8C4LI93_EQUAS (40S ribosomal protein S29 n=1 Tax=Equus asinus asinus TaxID=83772 RepID=A0A8C4LI93_EQUAS)

HSP 1 Score: 101 bits (252), Expect = 5.990e-27
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVR 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVR 56

[Close]

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Match: A0A8C8VN91_9SAUR (40S ribosomal protein S29 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8VN91_9SAUR)

HSP 1 Score: 101 bits (252), Expect = 6.160e-27
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0

Query:    1 MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDIGFTKVR 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YAKDIGF KVR
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVR 56

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot

BLAST of mRNA_H-elongata_contig48370.11987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJK2_ECTSI	1.380e-30	90.74	Similar to ribosomal protein S29 n=1 Tax=Ectocarpu...	[more]
A0A3P9IV47_ORYLA	2.500e-27	77.19	40S ribosomal protein S29 n=3 Tax=Oryzias TaxID=80...	[more]
A0A3B3DEW7_ORYME	3.770e-27	77.19	40S ribosomal protein S29 n=1 Tax=Oryzias melastig...	[more]
L7N1Q0_MYOLU	4.010e-27	78.57	40S ribosomal protein S29 n=2 Tax=Amniota TaxID=32...	[more]
M3Y0Q0_MUSPF	4.550e-27	78.57	40S ribosomal protein S29 n=14 Tax=cellular organi...	[more]
UPI00090E0E50	4.930e-27	80.00	Uncharacterized protein n=1 Tax=Xenopus laevis Tax...	[more]
G5BW63_HETGA	5.190e-27	78.57	40S ribosomal protein S29 n=2 Tax=Rodentia TaxID=9...	[more]
A0A4D9E7Q6_9SAUR	5.330e-27	78.57	40S ribosomal protein S29 n=1 Tax=Platysternon meg...	[more]
A0A8C4LI93_EQUAS	5.990e-27	78.57	40S ribosomal protein S29 n=1 Tax=Equus asinus asi...	[more]
A0A8C8VN91_9SAUR	6.160e-27	78.57	40S ribosomal protein S29 n=1 Tax=Pelusios castane...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 8..55 e-value: 3.6E-14 score: 52.3
None	No IPR available	GENE3D	4.10.830.10		coord: 1..55 e-value: 7.3E-31 score: 107.8
None	No IPR available	PANTHER	PTHR12010:SF12		coord: 1..56
IPR039744	40S ribosomal protein S29/30S ribosomal protein S14 type Z	PANTHER	PTHR12010	40S RIBOSOMAL PROTEIN S29	coord: 1..56
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 22..44
IPR023676	Ribosomal protein S14, type Z, archaeal	HAMAP	MF_01364_A	Ribosomal_S14_2_A	coord: 3..57 score: 16.444

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig48370	contig	H-elongata_contig48370:2259..2435 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig48370.11987.1	mRNA_H-elongata_contig48370.11987.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig48370 2259..2435 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig48370.11987.1 ID=prot_H-elongata_contig48370.11987.1|Name=mRNA_H-elongata_contig48370.11987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MGSKALVNSHPKKFGKGGRFCRVCSNQHGLIRKYGLNMCRQCFRVYAKDI
GFTKVREW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001209	Ribosomal_S14
IPR039744	40S_S29/30S_S14z
IPR018271	Ribosomal_S14_CS
IPR023676	Ribosomal_S14_type-Z_arc