prot_H-elongata_contig48202.11969.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48202.11969.1
Unique Nameprot_H-elongata_contig48202.11969.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.820e-38
Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G +    E IS RL+KVR+        T +VGYAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R   GG  D +VLG YGRD  N+NG RL   A++++ S+ N  F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR--RGGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.980e-36
Identity = 85/202 (42.08%), Postives = 120/202 (59.41%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G +    E IS RL+KVR+        T +VGYAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A++++LS+ N  F TPK GG    F     K   ++RLD+I +RQ DRR VRN++V       SDH+LV  ++RL
Sbjct:  249 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRK--GCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRL 446
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.060e-36
Identity = 85/202 (42.08%), Postives = 117/202 (57.92%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G      E I+ RL+KVR+        T +VGYAPTET  T        K  FW  L   + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A+ ++LS+ N  F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 2.120e-36
Identity = 87/201 (43.28%), Postives = 119/201 (59.20%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIR 193
            GVG+A +E++  ++G      E IS RL+KVR+        T +VGYAPTETA          K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  AA+++LS++N  F TPK G      +  + KE HR  LD+IL+RQ DRRLVRN +V       SDH LV  ++R
Sbjct:   52 GVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 248
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 2.150e-36
Identity = 87/201 (43.28%), Postives = 119/201 (59.20%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIR 193
            GVG+A +E++  ++G      E IS RL+KVR+        T +VGYAPTETA          K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  AA+++LS++N  F TPK G      +  + KE HR  LD+IL+RQ DRRLVRN +V       SDH LV  ++R
Sbjct:  164 GVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 360
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 2.710e-36
Identity = 86/202 (42.57%), Postives = 120/202 (59.41%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G +    E IS RL+KVR+        T +VGYAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A++++LS+ N  F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 5.470e-36
Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G +    E IS RL+KVR+        T ++GYAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A++++LS+ N  F TPK G      +    KE  ++RLD+IL+RQ DRR VR+++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKE--KYRLDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRL 249
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.440e-35
Identity = 83/202 (41.09%), Postives = 117/202 (57.92%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+  +E++  ++G +    E I  RL+KVR+          +VGYAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A++++LS+ N  F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL
Sbjct:  155 GVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 352
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.480e-35
Identity = 84/202 (41.58%), Postives = 118/202 (58.42%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G +    E IS RL+KVR+        T +VGYAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A++++LS+ N    TPK GG    F     K   ++ LD+IL+RQ DRR VRN++V       SDH LV  ++RL
Sbjct:   84 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK-GGVQQTFQSSN-KGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 281
[Close]
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 3.400e-35
Identity = 85/202 (42.08%), Postives = 119/202 (58.91%), Query Frame = 0 
Query:    1 GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPTETAATCH------KSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDVRVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYERPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A +E++  ++G +    E IS RL+KVR+        T +V YAPTET  T        K  FW  L + + EV + DHL+++MD N RTG R +  G  D +++G YGRD  N+NG RLL  A++++LS+ N  F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL
Sbjct:  731 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRD--GCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 928
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48202.11969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE1.820e-3843.07Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE1.980e-3642.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K259_9PHAE2.060e-3642.08Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE2.120e-3643.28Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE2.150e-3643.28Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L7A7_9PHAE2.710e-3642.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSV0_9PHAE5.470e-3641.09Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KV75_9PHAE2.440e-3541.09Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KCV1_9PHAE2.480e-3541.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE3.400e-3542.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..194
e-value: 2.7E-19
score: 71.5
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48202contigH-elongata_contig48202:1031..1612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48202.11969.1mRNA_H-elongata_contig48202.11969.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48202 1031..1612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48202.11969.1 ID=prot_H-elongata_contig48202.11969.1|Name=mRNA_H-elongata_contig48202.11969.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
GVGLAARESIARALGPDSIVPEHISARLLKVRVIFKCRAVTTLIVGYAPT
ETAATCHKSKFWKELRSTVAEVPASDHLILMMDVNTRTGGRGEEGGLGDV
RVLGPYGRDTFNDNGSRLLACAAEHKLSIVNNLFSTPKRGGSSDAFTYER
PKESHRWRLDYILVRQHDRRLVRNITVHPKMKSDHRLVSASIRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf