prot_H-elongata_contig4815.11957.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4815.11957.1
Unique Nameprot_H-elongata_contig4815.11957.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1467
Homology
BLAST of mRNA_H-elongata_contig4815.11957.1 vs. uniprot
Match: D8LLZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLZ1_ECTSI)

HSP 1 Score: 775 bits (2002), Expect = 2.290e-249
Identity = 573/1543 (37.14%), Postives = 776/1543 (50.29%), Query Frame = 0
Query:   93 MMESIIRDLEKSALVKRTQKQFADLKGELRRKEQHIASLKAIQNSNHVLNPAEANEPLTDKDERIIAQSNQQATEAGYGQVPRSSHNTANCTKPQLAELERLRAQNYSMRAEIAGLH---------SELHAVNSR-DRKSETYSGEIRDSRDFSAEGGIDKRDSTSGPLFHEGQAVECQTVGLGAWRSAVVDSVRLCIDTMGG-------------SSGRRSKAYTYTVWLDKGGSESG----VPEARIRLA-KGDDLGSGTSPSIVHRG--SKTIIRAKIFRSGETILARDG------ESKGKWIRAEVIRRNEDGTYCVVFDGSVGE-QNLHSAMLRSTDDLEQNAASGGGNAIDADDDNQREQDKSGVASAGEEAELRYEEKREILLAAARDAFLDIVEVGRGVLARYPGKDTWGAGTVVGQGKDELHLSVDFDSGDFVENLPFIFVRPRLAGNILSDQGHVNPGDAVLAQK---DDTLSS--GDWCPARFKRYEK--GGNCSLVFAGEAATTTTRRGRAQLLYGGTK----------KCDPPEIPDVPPLPTKPVRAKKHRVGDIVMACIPKIRAWMPALVRMSKGRGRYSVEWADGEKVDSLLFMFIATLGSRTKENVPTTIIERQPLCQNRLAGSSNVRRDEGTFEGNGATGEVQNALVAQSCGEDGIDGETAKVTKTYVRLRQPQLKVGEPVLAKTLKDS-VWAPGAINKVLGDSKYDIIFTDGSTVEGLSFLFIRALDLGTLSDSGDD---------------SEEIAGPGRDYYKVGDTVYVLKRGQSLENIPLNTRNRDLWRAGVVGRVSNGRYTVVYDGEEGKPQESRIHVERVRPRQRIRQKVMENNDTVLALSKKPGRGWMMGTIAGRTGKGTYNIAFSDGSEEDDIRFANLRRVESNGKEEDKHHRTDKPAMRAIRQRRFRLGKFVLARHRESRKWGVVQVLEALSDGRYDLKLAGGEGSVFKGVSFQSMRHLDIAQVLADNPLPAGCKSRGVGEDQSQPLDNGPDTGDR--TLSQSISAGIWVEQDAN--HCSVTDTVDDARKSIFHMKT-----------------------DNVPTPVVKAG-----------LDIGSNVYVLRRGKSADVDVKDTSAWRSGKIIFIRDNGALAVEYDEPGNPKEDRVADYRVRPRIVLD--------------------------HCDSVRRAENNTHDCLPET--FVEGDIVV--TRAEGSDEVSLAAVNASLGLSMHRVSFLDGSGTTELESHQLSHLTNISQVGRALSTGGKGIVIKKNASKMRKLRLGELVLAQKDCKT----WKNQPWFAAIVLEAAGGGMYSLRFEGDEDPTRVHLTKIRPLKTNISGRGRAGGEALVLRVSEASFNLSTAPSTARHTQPHLILAAGERGGRGEAWDAPWLHA----------DAVEAGSARDQES-----------FVVRGRARPGSRNPTWTDKKGDVFFLSLEGLEEPALFLCLEDGGAKTSTTNRPDRGG-----GGRVSEEAILAVGCIPVPLD 1467
            ++ESI++D+EKS+ +K   +Q ADLK +L  KE+ +A+L+  Q   + L  AE  E L  + ER+IA+SN +      G+   +S N+A+ ++ + +                             +EL  V  R D  S    G    +RD    G   +   + G  F+EGQAVEC+  G  +W  A VDSVRL I+ +GG              S    + Y Y V+ D  G E+G    VPE RIR A  GD  G G   S V R    +T+IR+++F +G+ +L RDG      +   KW   EVIRRN++GTY V+  G   E ++ H  MLR+ D  + +  SG     D  D     Q K+   S  EEAE+RY E+RE LL  AR      + VG+ V+A+  G   W +G VV    D L   V+FDSGD  +NLP IFVRPR  G+ L+  G    GDAVLAQK    DT S   GDW  ARF+ Y++    +C + F GE A++  +  R + LY   +                        TKPVRAKKHR GDIV+ACIP ++ W PA++   KG GRYSVEWAD  +   LLFM IA++   +++    ++  ++    +  +  +  R       G G TG  +      S  E    G T  V     RLRQ  L VGEPVLAK   D   W+PG++ +  G  +YDI FTDG+T E LSFLF+R L       SGDD               + E+   G     VGD+VYVLKRG S+E    +  NRDLWR   V  V++GRYTV Y+GEEGKP+ESR+  ER+R R  IRQK ++  D VLALSK PGRGW+MG +  R   G Y I+F+DG+E D IRF NLRRV  + + E+K    DKP+ RAIRQRRF+ G+  L +H E+RKW +V+VLEAL  GRYDL+          GV FQ +RHLD+A    D+    G         +  P D+    G+R  T S ++S   W   + +  H           +  +H +                        D  P    +             L IGS+VYVLRRGK  D D++D ++WRSGK++F+R NG  AVEYDE G+PKEDR+A+ R+R R+  +                          + D V   E    D   +   F  GD+    TR  G    +   V+A LG  ++RV F DGSGT EL+S +LSH        ++ S+          ++K R L  G+ V+A++   +       + W AA V++      YS+ F GD +P RVH T+++PL+ + +   R     L LRV+E SF+L  A S ARHT P LILA GER       DA WLH           DA   GS R Q +           F+ RG ARPGSRNP+W D +   F+LSL+GL++PALF+ LEDG  K        RGG     GG+    A LA  CIPVPL+
Sbjct:  130 VLESIVKDIEKSSRMKHAMEQVADLKADLSLKEKQVAALRKSQAVEYTLKLAEEKEALQVRVERLIAESNSKHDSGIRGRT--TSFNSASSSQKEQSAASXXXXXXXXXXXXXXXXXXXXXXXXXXAELELVEMRGDSGSGREHGSRSQNRDNMDRGRARQHCHSDGARFYEGQAVECRKQGSDSWLPATVDSVRLTIEPLGGXXXXXXXXXXXXXDSRGSHRTYMYGVYFD--GEETGRREDVPEFRIRAAASGDGNGPGLGSSRVVRDCDGETVIRSRVFGAGDLVLVRDGGGGRTNQDNKKWTLGEVIRRNDNGTYRVLVSGGQAEGKDFHPTMLRAQDGPKNSFDSG----CDVHDQPGASQTKTKATSPAEEAEIRYAERREELLELARGDLPAPLHVGQEVIAKSGGSTVWSSGVVVATDSDNLRCRVEFDSGDVEDNLPCIFVRPRRGGD-LAPGGDARTGDAVLAQKTRKQDTRSGDRGDWFAARFRSYDEDDADSCYVTFDGERASSRLQATRVRFLYPSARGGXXXXXXXXXXXXXXXXXXXXXXTKPVRAKKHREGDIVLACIPTVKKWTPAVITGVKGHGRYSVEWADFVREKPLLFMHIASMQGPSRKRA-ISVGHKKSSDDSADSHHATTRAPASGASGGGDTGSDERRSRVLSA-ESSAGGITPSV-----RLRQRALNVGEPVLAKKAPDQGFWSPGSVTRADGGGRYDIRFTDGTTAEDLSFLFVRGLS--AEQSSGDDRGGEVDTRSGRITSDTSEMHPSGERDPVVGDSVYVLKRGHSVEITSQDMHNRDLWRVATVTAVASGRYTVQYNGEEGKPKESRVVAERLRVRNVIRQKAVQMGDAVLALSKTPGRGWVMGAVTARGSDGKYTISFTDGTESDQIRFVNLRRVVGHAEGEEKDDHNDKPSPRAIRQRRFKKGELALTKHSETRKWVIVKVLEALPSGRYDLQFLEEGSPNALGVPFQHIRHLDLACFAGDSQGATGNGXXXXXXXKRSPRDDMA-VGERIPTESHTMSDEGWDGNNGHDYHAHSGHRSRGGSEEGYHQEKRVEKPRQQREASAGGGSTDYDERDETPRNRREGDGNRGASSETRPLTIGSDVYVLRRGKRQDADLQDKTSWRSGKVVFVRSNGTFAVEYDEDGSPKEDRIAENRLRRRLNNNDKDXXXXXXXXXXXXXXXXSNNDFGRYQDRVGSDEEYGDDFHRQDNKFEAGDMAFAQTRGWGRKNWTRVTVDAYLGKGLYRVEFADGSGTKELDSKKLSHTDPSGTTHKSKSSARAKT--DPQSTKSRWLDAGDPVVARRAASSNDDGASGRKWEAAKVVKVIDEEYYSVLFSGDPEPVRVHFTEVKPLEDHAADNSRLVTTGLFLRVTEPSFDLKIAASAARHTSPRLILATGERANE---HDALWLHHKNIDNDENDDDAWSNGSKRVQRNRNHNDGTKAVGFLSRGAARPGSRNPSWRDGE---FWLSLKGLDDPALFVALEDG-KKVQEQRGGGRGGWKRGEGGQ-GGVAFLAEACIPVPLE 1643          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4815.11957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLZ1_ECTSI2.290e-24937.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..85
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableGENE3D2.30.30.140coord: 726..785
e-value: 4.1E-7
score: 31.7
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 1259..1321
e-value: 16.0
score: 6.2
coord: 954..1014
e-value: 58.0
score: 1.5
coord: 342..401
e-value: 4.1
score: 11.3
coord: 1179..1237
e-value: 16.0
score: 6.4
coord: 729..787
e-value: 0.5
score: 19.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4815contigH-elongata_contig4815:2432..10106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4815.11957.1mRNA_H-elongata_contig4815.11957.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4815 2432..10106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4815.11957.1 ID=prot_H-elongata_contig4815.11957.1|Name=mRNA_H-elongata_contig4815.11957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1467bp
NHPPARPSSHRARGPRTENLASRKRRHSSEVDNGGCERSKGSELVILQQK
ITESDRAKAQAQEQLKRQDVEIAKLERYINQLVEERGGRDKNMMESIIRD
LEKSALVKRTQKQFADLKGELRRKEQHIASLKAIQNSNHVLNPAEANEPL
TDKDERIIAQSNQQATEAGYGQVPRSSHNTANCTKPQLAELERLRAQNYS
MRAEIAGLHSELHAVNSRDRKSETYSGEIRDSRDFSAEGGIDKRDSTSGP
LFHEGQAVECQTVGLGAWRSAVVDSVRLCIDTMGGSSGRRSKAYTYTVWL
DKGGSESGVPEARIRLAKGDDLGSGTSPSIVHRGSKTIIRAKIFRSGETI
LARDGESKGKWIRAEVIRRNEDGTYCVVFDGSVGEQNLHSAMLRSTDDLE
QNAASGGGNAIDADDDNQREQDKSGVASAGEEAELRYEEKREILLAAARD
AFLDIVEVGRGVLARYPGKDTWGAGTVVGQGKDELHLSVDFDSGDFVENL
PFIFVRPRLAGNILSDQGHVNPGDAVLAQKDDTLSSGDWCPARFKRYEKG
GNCSLVFAGEAATTTTRRGRAQLLYGGTKKCDPPEIPDVPPLPTKPVRAK
KHRVGDIVMACIPKIRAWMPALVRMSKGRGRYSVEWADGEKVDSLLFMFI
ATLGSRTKENVPTTIIERQPLCQNRLAGSSNVRRDEGTFEGNGATGEVQN
ALVAQSCGEDGIDGETAKVTKTYVRLRQPQLKVGEPVLAKTLKDSVWAPG
AINKVLGDSKYDIIFTDGSTVEGLSFLFIRALDLGTLSDSGDDSEEIAGP
GRDYYKVGDTVYVLKRGQSLENIPLNTRNRDLWRAGVVGRVSNGRYTVVY
DGEEGKPQESRIHVERVRPRQRIRQKVMENNDTVLALSKKPGRGWMMGTI
AGRTGKGTYNIAFSDGSEEDDIRFANLRRVESNGKEEDKHHRTDKPAMRA
IRQRRFRLGKFVLARHRESRKWGVVQVLEALSDGRYDLKLAGGEGSVFKG
VSFQSMRHLDIAQVLADNPLPAGCKSRGVGEDQSQPLDNGPDTGDRTLSQ
SISAGIWVEQDANHCSVTDTVDDARKSIFHMKTDNVPTPVVKAGLDIGSN
VYVLRRGKSADVDVKDTSAWRSGKIIFIRDNGALAVEYDEPGNPKEDRVA
DYRVRPRIVLDHCDSVRRAENNTHDCLPETFVEGDIVVTRAEGSDEVSLA
AVNASLGLSMHRVSFLDGSGTTELESHQLSHLTNISQVGRALSTGGKGIV
IKKNASKMRKLRLGELVLAQKDCKTWKNQPWFAAIVLEAAGGGMYSLRFE
GDEDPTRVHLTKIRPLKTNISGRGRAGGEALVLRVSEASFNLSTAPSTAR
HTQPHLILAAGERGGRGEAWDAPWLHADAVEAGSARDQESFVVRGRARPG
SRNPTWTDKKGDVFFLSLEGLEEPALFLCLEDGGAKTSTTNRPDRGGGGR
VSEEAILAVGCIPVPLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor