prot_H-elongata_contig48143.11956.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48143.11956.1
Unique Nameprot_H-elongata_contig48143.11956.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length329
Homology
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: UPI001F373689 (DDE-type integrase/transposase/recombinase n=4 Tax=Terrabacteria group TaxID=1783272 RepID=UPI001F373689)

HSP 1 Score: 186 bits (471), Expect = 6.310e-49
Identity = 121/336 (36.01%), Postives = 182/336 (54.17%), Query Frame = 0
Query:    3 GMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVE----RLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDV--KKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREATTTM------TQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
             +  N V++ V  P+    +  K +YKRK G+D KVE +K RLVA+G+ + EG+ Y E +SP     SIR+L A A   D E+   D + AF+   +DE +Y+  PE +    G  E    +L K+IYG  Q  R WN KF   + + GF+Q   + CV++KG +G A    V+  D+IL    D   M      L  +F++KD+ +A Y +   + R+RK   L + Q   +E ++ K+++   K+  +P+  GV  L +   P+ PEE E MR+ PY  A  ++      T+PDI  AV  V+R+  NPGP H  AV  I +YL R KD+ +TY
Sbjct:  733 SLYSNQVWELVDAPEGIKPIGCKWIYKRKRGVDGKVETFKARLVAKGYTQKEGIDYEETFSPVAMLKSIRILLAIACHYDYEIWQMDVKTAFLNGSLDECIYMMQPEGF--IAGGQENMVCKLKKSIYGLKQASRAWNIKFNQAVKSFGFDQNIDEPCVYKKG-SGNAVAFLVLYVDDILLIGNDVGMMSSTKVWLSSQFQMKDLGEASYVLGIKLLRDRKNKMLALSQSSYIEKILVKYNMHDSKKGLLPSRHGV-PLSRNQCPKTPEEIESMRRVPYASAVGSLMYAMLCTRPDICFAVGMVSRYQSNPGPMHWTAVKHIFKYLRRTKDYMLTY 1064          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.410e-47
Identity = 111/317 (35.02%), Postives = 174/317 (54.89%), Query Frame = 0
Query:   16 PKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            P+ +  V +K  +  K   + K++ +K RLVA+GF ++  V Y    SP PS+ASI+++ A A  K   L H+D ++A+  A +DE++++++P         + +  +AIYG  Q GR W       +   GFEQ KAD CVFRK V+    ++ V+  D+IL    D+   +   A L KKF  K++ + +++    I R+ +   L+I Q   ++SMVE+FDVK  S+IP T G     K ++       EE  ++P REA       +T ++PD++ AVRAVAR    P   H +A+ KI+ YL   +D GITY
Sbjct:  776 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1084          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.620e-47
Identity = 111/317 (35.02%), Postives = 174/317 (54.89%), Query Frame = 0
Query:   16 PKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            P+ +  V +K  +  K   + K++ +K RLVA+GF ++  V Y    SP PS+ASI+++ A A  K   L H+D ++A+  A +DE++++++P         + +  +AIYG  Q GR W       +   GFEQ KAD CVFRK V+    ++ V+  D+IL    D+   +   A L KKF  K++ + +++    I R+ +   L+I Q   ++SMVE+FDVK  S+IP T G     K ++       EE  ++P REA       +T ++PD++ AVRAVAR    P   H +A+ KI+ YL   +D GITY
Sbjct: 1155 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1463          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.640e-47
Identity = 111/317 (35.02%), Postives = 174/317 (54.89%), Query Frame = 0
Query:   16 PKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            P+ +  V +K  +  K   + K++ +K RLVA+GF ++  V Y    SP PS+ASI+++ A A  K   L H+D ++A+  A +DE++++++P         + +  +AIYG  Q GR W       +   GFEQ KAD CVFRK V+    ++ V+  D+IL    D+   +   A L KKF  K++ + +++    I R+ +   L+I Q   ++SMVE+FDVK  S+IP T G     K ++       EE  ++P REA       +T ++PD++ AVRAVAR    P   H +A+ KI+ YL   +D GITY
Sbjct: 1175 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1483          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.680e-47
Identity = 111/317 (35.02%), Postives = 174/317 (54.89%), Query Frame = 0
Query:   16 PKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            P+ +  V +K  +  K   + K++ +K RLVA+GF ++  V Y    SP PS+ASI+++ A A  K   L H+D ++A+  A +DE++++++P         + +  +AIYG  Q GR W       +   GFEQ KAD CVFRK V+    ++ V+  D+IL    D+   +   A L KKF  K++ + +++    I R+ +   L+I Q   ++SMVE+FDVK  S+IP T G     K ++       EE  ++P REA       +T ++PD++ AVRAVAR    P   H +A+ KI+ YL   +D GITY
Sbjct: 1318 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1626          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.460e-47
Identity = 109/317 (34.38%), Postives = 175/317 (55.21%), Query Frame = 0
Query:   16 PKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            P+ +  V +K  +  K   + K++ +K RLVA+GF ++  V Y    SP PS+ASI+++ A A  K   L H+D ++A+  A +DE++++++P         + +  +AIYG  Q GR W       +   GFEQ KAD CVFRK V+    ++ V+  D+IL    D+   +   A L KKF  K++++ +++    I R+ +   L+I Q   ++SMV++FDV+  S+IP + GV    K D+ +  E       +P REA       +T ++PD++ AVRAVAR    P   H +A+ KI+ YL   +D GITY
Sbjct:  330 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 638          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.650e-45
Identity = 111/317 (35.02%), Postives = 166/317 (52.37%), Query Frame = 0
Query:   16 PKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            P+ +  V +K  +  K   D K+EK+K RLVA+GF ++  V Y    SP PS+ASI+++ A A  K  +L H+D ++AF  A +DE +++ +P    +    V +  +AIYG  Q GR W       +   GFEQ KAD CVFRK  +           D IL    D    +  A+ L K F  KD+ +  ++    + R+ +   L+I Q   ++S+V +FDV+  S IP + GV    K D+       E   ++P REA       +T ++PDI+ AVRAVAR    P   H +A++KI+ YL   +D GITY
Sbjct:   39 PEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDD-------ESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITY 347          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: UPI001378C744 (hypothetical protein n=1 Tax=Weizmannia coagulans TaxID=1398 RepID=UPI001378C744)

HSP 1 Score: 167 bits (424), Expect = 1.760e-45
Identity = 113/336 (33.63%), Postives = 178/336 (52.98%), Query Frame = 0
Query:    3 GMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEY--QKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVG--VVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESK--IPTTSGVLTLLKADEPRNPEEKEEMRKFPYREATTTM------TQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
             M  N V+  V  P     V  K +YKRK G+D KVE +K RLVA+G+ + EG+ Y E +SP     SIR+L + AA  D E+   D + AF+  +++E++Y+  PE +  +     V +L ++IYG  Q  R WN +F   + + GFEQ   + CV+++      KVV   V+  D+IL    D   M      L  +F +KD+ +A + +   + R+RK   L + Q   ++ ++E F ++   K  +P   GV  L     P+  EE+  MR+ PY  A  ++      T+PDI  +V  V+R+  NPGP H +AV  I++YL R +D+ + Y
Sbjct:    8 SMYSNHVWDLVKAPNGIKPVDCKWVYKRKRGIDGKVETFKARLVAKGYTQKEGIDYDETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNLEEEIYMMQPEGFIAKNQEHMVCKLKRSIYGLKQASRSWNIRFDQAIKSFGFEQNLDEPCVYKR---HRDKVVMFLVLYVDDILLIGNDVGVMSSVKVWLSSQFDMKDLGEANFILGIKLWRDRKNKMLGLSQTGYIDKVLEWFSMQNSKKGLLPFRHGV-PLSDDQRPKTQEEENMMRQVPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGPKHWQAVKHILKYLRRTRDYMLVY 339          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF)

HSP 1 Score: 176 bits (445), Expect = 1.850e-45
Identity = 114/336 (33.93%), Postives = 184/336 (54.76%), Query Frame = 0
Query:    1 MRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEY--QKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVK--KESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREATTTM------TQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            M  M  N V+  V  P     +  K +YKRK GLD KV+ +K RLVA+G+ ++EG+ Y E +SP     SIR+L A AA  D E+   D + AF+  ++ E +Y++ PE +  +     V +LN++IYG  Q  R WN +F   + + GF Q   + CV++K ++G   V  V+  D+IL     K  +      L K+F +KD+ +A + +   + R+RK+  L + Q   +++++ +F ++  K+  +P   G+  L K   P+  +E EEM+  PY  A  ++      T+PDI+ AV  VAR+  NPG  H  AV  I++YL R K++ + Y
Sbjct:  815 MGSMDSNQVWDLVELPDGVRPIGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYKK-ISGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHGI-PLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKYLRRTKEYMLVY 1148          
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 174 bits (441), Expect = 6.480e-45
Identity = 105/321 (32.71%), Postives = 183/321 (57.01%), Query Frame = 0
Query:    9 VYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDN-ILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEE--KEEMRKFPYREATTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 326
            V+++V RP+D+ ++ +K ++K K G D +VEKYK RLVAQGF +VEG+ Y E ++P   + SIR+L A AA  D E+   D + AF+  +++E++Y+++P  ++    AV RL KA+YG  Q  R W  K   ++  +GF + +AD CVF K ++    ++ V   DN +L+ + D  T  +  ++LG +F + D+ +  + ++  +TRNR+   +++ Q   +E ++E+  +  E K P  + + + LK ++   PE   KE  R           T+ DIA+AV  ++R  + PG  H  AV ++ +YL    +  + Y
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVDDNMVLSDSLDLVTKTK--SDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMA-ECK-PVHTPMDSKLKLEKLHAPEVNVKEYQRLIGSLMYAAIATRFDIATAVGMLSRHSQAPGKEHHIAVKRVFRYLRGASESDVLY 1342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F3736896.310e-4936.01DDE-type integrase/transposase/recombinase n=4 Tax... [more]
A0A6H5KSG8_9PHAE3.410e-4735.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.620e-4735.02Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.640e-4735.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.680e-4735.02Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JC10_9PHAE4.460e-4734.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE1.650e-4535.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001378C7441.760e-4533.63hypothetical protein n=1 Tax=Weizmannia coagulans ... [more]
A0A5A7QRB1_STRAF1.850e-4533.93Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=... [more]
A0A0C2WN23_AMAMK6.480e-4532.71Integrase catalytic domain-containing protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..243
e-value: 2.0E-40
score: 139.0
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 13..223
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 13..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48143contigH-elongata_contig48143:3128..4132 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48143.11956.1mRNA_H-elongata_contig48143.11956.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48143 3104..4132 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48143.11956.1 ID=prot_H-elongata_contig48143.11956.1|Name=mRNA_H-elongata_contig48143.11956.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp
MRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGF
WKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADID
EKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQ
GKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKL
KDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTS
GVLTLLKADEPRNPEEKEEMRKFPYREATTTMTQPDIASAVRAVARFCEN
PGPAHKEAVMKIMQYLLRPKDWGITYVDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like