prot_H-elongata_contig48120.11953.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig48120.11953.1
Unique Name	prot_H-elongata_contig48120.11953.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	187

Homology

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A6H5JE14_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE14_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.290e-56
Identity = 88/102 (86.27%), Postives = 96/102 (94.12%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKEDA 102
            MKPP+VMM+TPNGRFACSRRLCLSMSDFHPESWNP+WSVSTILMGL+SFMLD  ATLGS+TSSTAQKK+FA +SLE NCKN AFRKLFPDLVELHERRK +A
Sbjct:   66 MKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPVWSVSTILMGLYSFMLDNAATLGSITSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEA 167

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: H3GEL4_PHYRM (UBC core domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GEL4_PHYRM)

HSP 1 Score: 159 bits (403), Expect = 6.130e-46
Identity = 74/101 (73.27%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 101
            MKPPAVMM+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML++ ATLGS+++S AQK+K+AA SLE NC NA FRKLFPDLV L E R++D
Sbjct:   66 MKPPAVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLESQATLGSISTSDAQKRKYAAASLETNCSNATFRKLFPDLVALQEEREKD 166

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A3M6VRT7_9STRA (UBC core domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRT7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.010e-45
Identity = 72/100 (72.00%), Postives = 88/100 (88.00%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKE 100
            MKPP+V+M+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++ AQKKK+AA SLE NC NA FRKLFPDLV LHE R++
Sbjct:   66 MKPPSVLMMTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKKKYAAASLETNCSNATFRKLFPDLVALHEEREK 165

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A7S1TQ46_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ46_9STRA)

HSP 1 Score: 157 bits (398), Expect = 6.150e-45
Identity = 72/102 (70.59%), Postives = 88/102 (86.27%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKEDA 102
            +KPP+++M TPNGRF  +RRLCLSMSDFHPESWNPMWSVSTIL GLFSFMLDT  TLGS+ +S A+K+  AA+SL +NCKN  FR+LFPDLVE+ E++KE+A
Sbjct:   96 LKPPSILMYTPNGRFKTNRRLCLSMSDFHPESWNPMWSVSTILTGLFSFMLDTAPTLGSIETSAARKRALAAESLSYNCKNEIFRELFPDLVEVCEKQKEEA 197

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A3F2RXI9_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXI9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.790e-44
Identity = 72/101 (71.29%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 101
            MKPP+VMM TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+T ATLGS++++ AQK+K+AA SLE NC NA FRKLFPDLV L E+R ++
Sbjct:   66 MKPPSVMMTTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLETQATLGSISTTDAQKRKYAAASLEANCTNATFRKLFPDLVTLQEQRDKE 166

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: W2KBB3_PHYPR (UBC core domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2KBB3_PHYPR)

HSP 1 Score: 155 bits (391), Expect = 3.730e-44
Identity = 71/101 (70.30%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 101
            MKPP+VMM+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++ AQK+K+A  SLE NC NA FRKLFPDLV L E R++D
Sbjct:   66 MKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAVASLETNCTNATFRKLFPDLVALQEEREKD 166

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A0P1AWA5_PLAHL (Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA5_PLAHL)

HSP 1 Score: 152 bits (384), Expect = 3.780e-43
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 101
            MKPP+VMM+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++  QK+K+AA SLE NC NA FRKLFPDLV L   R++D
Sbjct:   62 MKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSMSTTDGQKRKYAATSLETNCANATFRKLFPDLVALQAEREKD 162

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: M4BC77_HYAAE (UBC core domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC77_HYAAE)

HSP 1 Score: 152 bits (383), Expect = 6.350e-43
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 101
            MKPP+V+MLTPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++ AQK+KFAA SLE NC NA FR LFPDLV L + R+ +
Sbjct:   66 MKPPSVLMLTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKFAAASLETNCSNAVFRNLFPDLVALQKARERE 166

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A6U5LMW0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LMW0_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.860e-43
Identity = 69/103 (66.99%), Postives = 86/103 (83.50%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKEDAS 103
            +KPP+V+M TP+GRF   RRLCLSMSD+HPESWNPMWS+STIL GLFSFM DT  TLGS+ +S + K++FA DSLEFNC+NA F+ LFPDLVEL + R+ +A+
Sbjct:   66 LKPPSVLMYTPSGRFMTGRRLCLSMSDYHPESWNPMWSISTILTGLFSFMNDTSPTLGSLETSDSTKREFARDSLEFNCRNATFKTLFPDLVELQDERRRNAA 168

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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A5D6XIA3_9STRA (UBC core domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIA3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.680e-42
Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 101
            MKPPAV M+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML++  TLGS+T++ AQK+KFAA SLE NC NA FRK+FP+LV L  +R+++
Sbjct:   66 MKPPAVYMVTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLESQPTLGSITTTDAQKRKFAAASLETNCANATFRKMFPELVALQRQREDE 166

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot

BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JE14_9PHAE	1.290e-56	86.27	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
H3GEL4_PHYRM	6.130e-46	73.27	UBC core domain-containing protein n=6 Tax=Phytoph...	[more]
A0A3M6VRT7_9STRA	3.010e-45	72.00	UBC core domain-containing protein n=1 Tax=Peronos...	[more]
A0A7S1TQ46_9STRA	6.150e-45	70.59	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A3F2RXI9_9STRA	2.790e-44	71.29	UBC core domain-containing protein n=3 Tax=Phytoph...	[more]
W2KBB3_PHYPR	3.730e-44	70.30	UBC core domain-containing protein n=12 Tax=Phytop...	[more]
A0A0P1AWA5_PLAHL	3.780e-43	69.31	Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara...	[more]
M4BC77_HYAAE	6.350e-43	69.31	UBC core domain-containing protein n=2 Tax=Hyalope...	[more]
A0A6U5LMW0_9STRA	7.860e-43	66.99	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A5D6XIA3_9STRA	1.680e-42	68.32	UBC core domain-containing protein n=1 Tax=Pythium...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..108 e-value: 3.5E-34 score: 119.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..65
None	No IPR available	PANTHER	PTHR24068:SF135	UBIQUITIN-CONJUGATING ENZYME E2 J2	coord: 1..115
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 1..115
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 36..60
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 181..186
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 61..161
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 162..180
None	No IPR available	TMHMM	TMhelix		coord: 158..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig48120	contig	H-elongata_contig48120:2156..4094 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig48120.11953.1	mRNA_H-elongata_contig48120.11953.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig48120 1000..4102 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig48120.11953.1 ID=prot_H-elongata_contig48120.11953.1|Name=mRNA_H-elongata_contig48120.11953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFM
LDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKE
DASTPAAGSVAGGGGNNKSTRCNSAARESGPAGGTGGSRNGGAPPKAGGV
GNARREAGGITFFWVSLGVAVGVMGVAYVFRPSLEA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD