prot_H-elongata_contig48030.11941.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48030.11941.1
Unique Nameprot_H-elongata_contig48030.11941.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length408
Homology
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: D8LM44_ECTSI (Similar to jouberin isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM44_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 4.100e-170
Identity = 272/413 (65.86%), Postives = 306/413 (74.09%), Query Frame = 0
Query:    1 RRYSATLTVAVGPTTRPTLVWVMRRPVASYERERHQLSYEALAAMYEKSIEDKISGHGEG--SGSARCGNADVGATGISKALTDRAWAARARRLRNKNEPCVLPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDDPLPGRFPIRLFDSETGRCWHELKGHASMVYSLVWSSDDSFLLSGSGDGTAKVWHVLFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQPL-AQDITRSTTVAR--NTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSP---GGQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRASGGRGGVDDYSVLRKVQHMDLMGKAITSLALAPRLRRGQLLVQAHCNTLRLLDLGTYQV 405
            +RY ATL V+VGPT RPT V V RRP AS+ERE H LSYEALAAM ++S ED+ +    G      R G  D G           +  AR RRLR+KNEPCVLPDRLLHRVYAGQNGA+TLAFSGSG+LLAAACCDDPLPGRFPIRL D ETGRC HEL GHA MVYSLVWS  DSFLLS S DGTAKVW +   S     G          PAS EG+  T  R G +  PRL CVLQHAPPCFVYAAVFQP    D TR TT     +   +SE+++CALVVTGAYDR+LRLWD + A  +P   GG+AK+LGTLS+K+VHESHVNAIVYDS+N RLYSGDG G +VVWRR  GG+GGV+DY +LRKVQH DL+GKAITSLALAPRLRRGQLLVQAH NTLRLLDLGTY++
Sbjct:  200 KRYPATLAVSVGPTPRPTPVLVARRPKASHEREHHNLSYEALAAMRQQSREDRENDEAAGILPAGGRSGR-DGGXXXXXXXXXXASAVARTRRLRDKNEPCVLPDRLLHRVYAGQNGAMTLAFSGSGSLLAAACCDDPLPGRFPIRLIDPETGRCRHELGGHACMVYSLVWSPGDSFLLSASADGTAKVWRISAVSNAGGVGNTGSHPGEGAPASAEGLPATATRGGKDDGPRLACVLQHAPPCFVYAAVFQPAEVMDRTRGTTATALDHQSPSSESSECALVVTGAYDRRLRLWDTTAAVATPAREGGRAKMLGTLSSKMVHESHVNAIVYDSRNSRLYSGDGAGVIVVWRRGGGGQGGVEDYGILRKVQHADLIGKAITSLALAPRLRRGQLLVQAHGNTLRLLDLGTYRL 611          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A835YME3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 3.050e-53
Identity = 146/387 (37.73%), Postives = 179/387 (46.25%), Query Frame = 0
Query:   83 RAWAARARRLRNKNEPCVLPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDDPLPGRFPIRLFDSETGRCWHELKGHASMVYSLVWSSDDSFLLSGSGDGTAKVWHV---------LFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQPLAQDIT------------------------------RSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSV-----------AGVSP----GGQAKL-----LGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRAS-----GGRGGVDDYSVLRKVQHMDLMGKAITSLALAPRLRRGQLLVQAHCNTLRLLDLGTYQV 405
            R+ A R RRLR   E C+ P R+L R+  G  GA  LAFS  GALLA AC  +  PGR+P+R+FD ETG    EL+GH    Y+L WSSD + LLS S DGTA VW +                                                PRL+  LQH+PP +VY AVFQP    +                               R     R+    S ++    +   A  R LR  D ++           AGV      GG         LG L  + VH + VNA+ YD++NGRLYSGD  G V+VWRRA+     GGRGG  +Y VLR+V   DL G  IT+LALAP  R  QLLVQA  N  RLLDL TYQ+
Sbjct:  676 RSAARRVRRLRAPAERCLPPTRVLQRLDGGPQGATALAFSPDGALLAVAC-GEVAPGRWPLRVFDPETGALLAELRGHRGAAYNLQWSSDAALLLSASADGTAAVWRMRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALAPRLLHALQHSPPTYVYCAVFQPAMPVVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGHVRGRSRSRGSFSSLAPFMSECALARPLRKTDNALSVPRLCRYSAAAGVPACAIAGGXXXXXXXAALGVLGGRAVHGARVNALAYDARNGRLYSGDAAGVVLVWRRAAVAAPGGGRGGAGEYGVLRRVARADLCGAPITALALAPHRRLAQLLVQAQGNVTRLLDLATYQL 1061          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A7S1G8J2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8J2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.440e-25
Identity = 74/203 (36.45%), Postives = 94/203 (46.31%), Query Frame = 0
Query:   90 RRLRNKNEPCVLPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDDPLPGRFPIRLFDSETGRCWHELKGHASMVYSLVWSSDDSFLLSGSGDGTAKVWHVLFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDV 292
            RR R  NEPC  P+ L+ R  AG +GA+++AFS  G  LAA C D  L   FPIR+   E+G     L GH S+VY L WS+D   LLS S DGT + W V                                R G  + P L  +++HAP  +VYAA F P A +                     LVVTG +DR +RLWD+
Sbjct:   12 RRQRAPNEPCRAPNALVRRFIAGADGAMSVAFSPDGRHLAAGCADGQL---FPIRIISVESGGERAALTGHGSIVYDLAWSTDSRTLLSASADGTVRAWRVP-------------------------------RDGGAR-PYLAALIRHAPAMYVYAARFHPKAPE---------------------LVVTGGFDRSVRLWDL 158          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A7S3USY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USY7_HETAK)

HSP 1 Score: 107 bits (268), Expect = 1.650e-24
Identity = 65/157 (41.40%), Postives = 86/157 (54.78%), Query Frame = 0
Query:  230 PRLMCVLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPGGQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRASGGRGGVDDYSVLRKVQHMDLMGKAITSLALAPRLRRGQL 386
            P L+  LQH PP FVY  +F   A          R+            V+T  +DR+L LWD        GG+ K  GTL   V H+SHVNA+ +++K GRLYS DG G ++VWR+   G      +S +R+V+H  L+GKA+T LAL P  RRGQL
Sbjct:    7 PHLVVTLQHRPPTFVYCGLFHCAAAGDPAPPRPHRH------------VLTAGFDRRLHLWDTR-----RGGRHK--GTLGGLVQHKSHVNALCWEAKTGRLYSADGAGVILVWRKTGPGTE-PQHFSAVREVRHPQLLGKAVTGLALRPLRRRGQL 143          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: F4P343_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P343_BATDJ)

HSP 1 Score: 104 bits (260), Expect = 1.930e-20
Identity = 90/356 (25.28%), Postives = 135/356 (37.92%), Query Frame = 0
Query:    1 RRYSATLTVAVGPTTRPTLVWVMRRPVASYERERHQLSYEALAAMYEKSIEDKISGHGEGSGSARCGNADVGATGISKALTDRAWAARARRLRNKNEPCVLPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDDPLPGRFPIRLFDSETGRCWHELKGHASMVYSLVWSSDDSFLLSGSGDGTAKVWHVLFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPGGQA----KLLGTLSNKVVHE-----SHVNAIVYDSKNGRLYSGDGVGAVVVWRRAS 347
            R+Y +TL V V    R     V RRP+   E+E  +L+YE                                            W       R +   C +P++L +R+  G  GA   +FS +G LLA AC +      +PIRL+D  TG      +GH  +VY L+W+ DD+ L+S S DG+ +VW   F  G                                    ++   QH  P FVY A  +P   D                 +   ++VTGAYD  +R W      +S    A         L +K +H+      ++NA+V+D++  RL+S D  G + +W   S
Sbjct:  546 RKYPSTLFVQVSAHGRVEPREVTRRPIGPTEKETGRLTYE-----------------------------------------QHTWR------RKEGHQCKIPNKLKYRINGGDMGAFACSFSHNGMLLAVACSNRQT---YPIRLYDVLTGERVESFEGHQDLVYQLIWTLDDTELISASADGSVRVWR-FFSDGSAC---------------------------------MVATYQH--PTFVYTATIRPPISD--------------ESTDKQQMLVTGAYDGIIRFWSHDSKALSQSKDALQPYPTSALLFHKPIHKLVGHACNINAVVFDAQGHRLFSADAQGTLKIWSSRS 801          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A482R9F8_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R9F8_9EURY)

HSP 1 Score: 95.9 bits (237), Expect = 3.530e-18
Identity = 75/245 (30.61%), Postives = 98/245 (40.00%), Query Frame = 0
Query:   86 AARARRLRNKNEPCVLPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDD---------------------------------PLP---GRFPIRLFDSETGRCWHELKGHASMVYSLVWSSDDSFLLSGSGDGTAKVWHVLFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSV 294
            +A +R  R  +E C LPD  +  +  G+ G + L+FS  GALLA  C  D                                 PL     R  IRL D+ + R    L+GH  ++YSL WS D  +L+S S DGTA+VWHV                    P ST    T   +  N    RL     H P  +VYAA F PLA                       L++TGA+D Q+RLWD  +
Sbjct:   12 SAASRFSRAPHEACTLPDTFITSLPTGKLGCMALSFSPDGALLAIGCEQDLSHPVRCPQLPHSCSVPACLRCASLRVHNVFFSPLACSRARVQIRLVDAFSLREVKLLQGHGGLIYSLAWSPDSKWLVSASADGTARVWHV--------------------PHSTVDAATGSVQVDNVANARLFSTALHTPLSYVYAAQFHPLAPH---------------------LIITGAFDGQVRLWDARI 215          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A7S0HNE5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HNE5_9CRYP)

HSP 1 Score: 94.4 bits (233), Expect = 4.820e-17
Identity = 97/408 (23.77%), Postives = 172/408 (42.16%), Query Frame = 0
Query:    3 YSATLTVAVGPTTRPTLVWVMRRPVASYERERHQLSYEALAAMYEKSIED-KISGHGEGSGSARCGNADVGATGISKALTDRAWAARARRLRNKNEPCVLPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDDPLPGRFPIRLFDSETGRCWHELKGHASMVYSLVWSSDDSF---LLSGSGDGTAKVWHVLFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPGGQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRASGGRGGVDDYSVLRKVQHMDLMGKAITSLALAPRLRRGQLLVQAHCNTLRLLDLGTYQVL 406
            Y +TL +++     P   +V  RP   +E+E+   +++          E+ K S + +    AR  +  +GA+G+        W             C +P+ ++HR  +   G   L+FSG G  LA   C       + IR+F+   G     LKGH  +VY +VWS  + F   + +G   G++++               +  ++   P        T  +  N +   ++    H  P +VY A F P  +    +T   ++  S S       VVTG +D+ +RLWDV    +   G A++L  ++    H SHVNA+       ++ SGD  G ++VW   +        + V+R +   ++   AI  + +    ++  L V A  N LRL+D   + ++
Sbjct:  407 YKSTLYISLKGIVSPESSYVQLRPKMPWEKEKGDDNFDFHEDHQNTGKENRKSSTYEQRLERARLASRWIGASGM--------W-------------CRVPNSVMHRFDSDYRGGFVLSFSGLGTYLA---CAVGARQSYNIRIFNVANGILAKTLKGHHEIVYDIVWSQHEFFNDKMDTGDTKGSSEI---------------SADEDEASPLILTASADTTAKVWNFESESVIATCHH--PSYVYCARFCPGPEGNKGTTEKEKSISSTS------YVVTGCFDKNIRLWDVRKQSLDADGSAQILQIIAG---HASHVNALYVHPVKSQMVSGDATGRLIVWSILN------HSFDVVRDLNEPEI-SSAINCIKMDSAGKK--LFVLARDNALRLIDTDRWVII 755          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A183RCA5_9TREM (WD_REPEATS_REGION domain-containing protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183RCA5_9TREM)

HSP 1 Score: 86.3 bits (212), Expect = 1.540e-15
Identity = 64/235 (27.23%), Postives = 106/235 (45.11%), Query Frame = 0
Query:  146 FDSETGRCWHELKGHASMVYSLVW------------------SSDDS------FLLSGSGDGTAKVWHVLFPSGRTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAP---------PCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPGGQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRAS 347
            FD++  +   EL GH+ ++YS+ W                  S D S      FL SGS DGT +VW + F     V        N L    T   + ++      +  +++  L H           P FVY+  F+PL++++T +      T  N +     L+ T  YDR +RLW +         + +LL  L+   VH+SH+N++ +D+   R+YSGD +G +V+W+  +
Sbjct:    9 FDNKRSQPNLELAGHSDIIYSVDWAKTPVIQNHNNKSTQKRSSKDFSSTKIFWFLASGSADGTVRVWRLHF---NQVYENFTNDDNFLSDPDTNIPVPSDASKSQFQVAQIINGLSHKKGILCNVLGHPNFVYSVAFKPLSKELTLNDFQVLQTLVNQDH----LLATACYDRVVRLWSIK------HNETQLLQELNG--VHQSHINSLTFDTDGSRIYSGDALGLIVIWKETN 228          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A430Q7I5_SCHBO (Jouberin n=2 Tax=Schistosoma TaxID=6181 RepID=A0A430Q7I5_SCHBO)

HSP 1 Score: 85.5 bits (210), Expect = 4.080e-14
Identity = 80/294 (27.21%), Postives = 130/294 (44.22%), Query Frame = 0
Query:  140 RFPIRLFDSETGRCWHELKGHASMVYSLVW------------------SSDDS------FLLSGSGDGTAKVWHVLFPSG-RTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMC-VLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPGGQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRASGGRGGV----DDYSVLRKVQHMDLMGKAITSLALAPRLRRGQLLVQAHCNTLRLLDLGTY 403
            +FP   FD++  +   EL GH+ ++YS+ W                  S D S       L SGS DGT +VW + F           N    VL   S       +  +G+     ++C VL H  P FVY+  F+P+++++  +      T  N +     L+ T  YDR +RLW +         + +LL  L+   VH+SH+N++ +D+   R+YSGD +G +V+W+     +         +   +K++  +L    I  L   P L    LLV    N  ++LDL +Y
Sbjct:  461 KFP---FDNKRSQPNLELAGHSDIIYSVDWAKIPVIQNHKNKSTQKYSSKDFSNTKIFWILASGSADGTVRVWRLQFNQVYEDFTNDPNTNIPVLSDTSKSPFQVGQIINGSSHKKGILCNVLGH--PNFVYSVAFKPISKELALNDFRILQTLVNRDH----LLATACYDRVIRLWSIK------HNETQLLQELNG--VHQSHINSLTFDTDGSRIYSGDALGLIVIWKETENQQRKQVKCQPKWMFEKKIEVRELEMCIINHLEFHPTLNL--LLVHTRDNCPKMLDLRSY 735          
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Match: A0A183MZD4_9TREM (WD_REPEATS_REGION domain-containing protein n=1 Tax=Schistosoma margrebowiei TaxID=48269 RepID=A0A183MZD4_9TREM)

HSP 1 Score: 85.1 bits (209), Expect = 4.320e-14
Identity = 78/296 (26.35%), Postives = 131/296 (44.26%), Query Frame = 0
Query:  140 RFPIRLFDSETGRCWHELKGHASMVYSLVW------------------SSDDS------FLLSGSGDGTAKVWHVLFPSG-RTVAGGKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMC-VLQHAPPCFVYAAVFQPLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPGGQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRASGGRGGV----DDYSVLRKVQHMDLMGKAITSLALAPRLRRGQLLVQAHCNTLRLLDLGTYQV 405
            +FP   FD++  +   EL GH+ ++YS+ W                  S D S       L SGS DGT +VW + F           N    V    S       +  +G+     ++C VL H  P FVY+  F+P+++++  +      T +N +     L+ T  YDR +RLW +         + +LL  L+   VH+SH+N++ +D+   R+YSGD +G +V+W+     +         +   +K++  +L    I  L   P L    LLV    N  ++LDL ++ +
Sbjct:  299 KFP---FDNKRSQPNLELAGHSDIIYSVDWAKTPVIQNHKNKSTQKYSSKDFSNTKIFWILASGSADGTVRVWRLQFDQVYENFTNDPNINIPVPSDTSKSPFQVDQIINGSSHKKGILCNVLGH--PSFVYSVAFKPISKELALNDFRVLQTLANRDH----LLATACYDRAIRLWSIK------HNETQLLQELNG--VHQSHINSLTFDTDGSRIYSGDALGLIVIWKETENQQRKQVKCQSKWMFEKKIEVRELEMCIINHLEFHPTLNL--LLVHTRDNCPKMLDLRSHPI 575          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48030.11941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM44_ECTSI4.100e-17065.86Similar to jouberin isoform 1 n=1 Tax=Ectocarpus s... [more]
A0A835YME3_9STRA3.050e-5337.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1G8J2_9STRA1.440e-2536.45Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3USY7_HETAK1.650e-2441.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F4P343_BATDJ1.930e-2025.28Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]
A0A482R9F8_9EURY3.530e-1830.61Uncharacterized protein (Fragment) n=1 Tax=Euryarc... [more]
A0A7S0HNE5_9CRYP4.820e-1723.77Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A183RCA5_9TREM1.540e-1527.23WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]
A0A430Q7I5_SCHBO4.080e-1427.21Jouberin n=2 Tax=Schistosoma TaxID=6181 RepID=A0A4... [more]
A0A183MZD4_9TREM4.320e-1426.35WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 102..147
e-value: 71.0
score: 5.3
coord: 302..344
e-value: 2.5
score: 14.5
coord: 229..291
e-value: 27.0
score: 8.0
coord: 150..189
e-value: 7.9E-10
score: 48.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 151..188
e-value: 9.6E-7
score: 29.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 157..190
score: 14.853
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 277..293
score: 8.637
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 270..406
e-value: 3.0E-10
score: 41.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 73..214
e-value: 1.0E-18
score: 69.1
NoneNo IPR availablePANTHERPTHR44499FAMILY NOT NAMEDcoord: 2..403
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 278..292
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 157..198
score: 12.736
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 102..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48030contigH-elongata_contig48030:207..3461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48030.11941.1mRNA_H-elongata_contig48030.11941.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48030 207..3461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48030.11941.1 ID=prot_H-elongata_contig48030.11941.1|Name=mRNA_H-elongata_contig48030.11941.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=408bp
RRYSATLTVAVGPTTRPTLVWVMRRPVASYERERHQLSYEALAAMYEKSI
EDKISGHGEGSGSARCGNADVGATGISKALTDRAWAARARRLRNKNEPCV
LPDRLLHRVYAGQNGAITLAFSGSGALLAAACCDDPLPGRFPIRLFDSET
GRCWHELKGHASMVYSLVWSSDDSFLLSGSGDGTAKVWHVLFPSGRTVAG
GKNGVQNVLGPASTEGVLTTERRSGNEKFPRLMCVLQHAPPCFVYAAVFQ
PLAQDITRSTTVARNTRSNSEANDCALVVTGAYDRQLRLWDVSVAGVSPG
GQAKLLGTLSNKVVHESHVNAIVYDSKNGRLYSGDGVGAVVVWRRASGGR
GGVDDYSVLRKVQHMDLMGKAITSLALAPRLRRGQLLVQAHCNTLRLLDL
GTYQVLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf