prot_H-elongata_contig48026.11939.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48026.11939.1
Unique Nameprot_H-elongata_contig48026.11939.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length116
Homology
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BLAST of mRNA_H-elongata_contig48026.11939.1 vs. uniprot
Match: A0A6H5JGM0_9PHAE (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGM0_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.080e-34
Identity = 73/118 (61.86%), Postives = 88/118 (74.58%), Query Frame = 0 
Query:    1 MGN-VVGGRESI-DDEAACGIFDFERCFGASLEDASPGVIREPLQGYVPSTGPPTTVRRGSVDTINEPLVGRLVTVHMMETNLILRETVGVVDQTVTSMPYTAIRRLTWDHSQSSLKL 116
            MGN VVG RESI DD    GI DFE CF AS ED +  ++ +PL GY  STGPP T RRGS + I+EPL GRL+TVHMM+T L+L+E VGVV+Q + S+PY AIR LTWDH+ SSLK+
Sbjct:    1 MGNIVVGDRESIGDDGDVDGISDFEHCFAASCEDCTDNLLPQPLPGYTSSTGPPETRRRGSKENIHEPLKGRLMTVHMMKTELLLKEAVGVVEQNLLSIPYGAIRVLTWDHAASSLKV 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48026.11939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGM0_9PHAE1.080e-3461.86PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48026contigH-elongata_contig48026:2583..2930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48026.11939.1mRNA_H-elongata_contig48026.11939.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48026 2530..2930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48026.11939.1 ID=prot_H-elongata_contig48026.11939.1|Name=mRNA_H-elongata_contig48026.11939.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp
MGNVVGGRESIDDEAACGIFDFERCFGASLEDASPGVIREPLQGYVPSTG
PPTTVRRGSVDTINEPLVGRLVTVHMMETNLILRETVGVVDQTVTSMPYT
AIRRLTWDHSQSSLKL
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