prot_H-elongata_contig47929.11929.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47929.11929.1
Unique Nameprot_H-elongata_contig47929.11929.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length306
Homology
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: D7FMI8_ECTSI (NPC1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI8_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 2.300e-140
Identity = 200/308 (64.94%), Postives = 242/308 (78.57%), Query Frame = 0
Query:    1 CFQAGVDTECTPEQAK-DGALSFPLDSAHGFGVLHDKVWDGSVENPSTGLCRRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSSTGCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGTVLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSF-ANATSDSAKRDARLQWDMSTLDTHANIISRGAPVPTLSAFSKAKEDHNGGSALALETLSCESFYNPGTKNVPFAYPPPTKDIDSCRQDH 306
            CFQ G+DT+CTP  A+ D A+SFP+DS+HGFGV HDKVWDGSVENPSTGLC  G PD +GRC+VDFVAPKGL  VAP++CPQY+D GCCSWQQNYALYQNL  LV+SFGS+TGCLACAVNLVNFWCALVCSPDQGAF ++HDPP+ +  R DDLTGGS  VLQ DV VDGD+ACRIYESC+S+A+VGETT MQSGLGLLKFQ+QTGAVGHGE+FF SF  NA+++S   + RL      LD  A    +  P    SA + + E     S+++ +TL+C+SF++PG+  +PFAYPP  +DI SC  D+
Sbjct:   48 CFQFGLDTDCTPIPAEGDTAVSFPMDSSHGFGVFHDKVWDGSVENPSTGLCDEGRPDSDGRCIVDFVAPKGLKDVAPIVCPQYKDSGCCSWQQNYALYQNLGLLVESFGSTTGCLACAVNLVNFWCALVCSPDQGAFASMHDPPFDQ--RRDDLTGGSSRVLQLDVNVDGDMACRIYESCKSIAVVGETTAMQSGLGLLKFQLQTGAVGHGEFFFPSFETNASAESPCGNKRLPVS-GGLDVRATE-RKDDPQAAASAPTASSES----SSMSFDTLACDSFFDPGSSTIPFAYPPKREDIISCTCDY 347          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: A0A835YTW9_9STRA (NPC1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW9_9STRA)

HSP 1 Score: 321 bits (823), Expect = 1.250e-105
Identity = 161/308 (52.27%), Postives = 204/308 (66.23%), Query Frame = 0
Query:    1 CFQAGVDTECTPEQAKDGALS--FPLDSAHGFGVLHDKVWDGSVENPSTGLCRRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSSTGCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATSDSAKR--DARLQWDM-STLDTHANIISRGAPVPTLSAFSKAKEDHNGGSALALETLSCESFYNPGTKNVPFAYPPPTKDIDSC 302
            CFQ GVDT CTP +  D   S  FP+++AHGF V HD +WDGS+ + S+GLC RG PD +GRC+  + A   L  VAP++CPQY   GCC+WQQNYAL+QNLRTLVDSFG +TGCLACA NLVN WCALVCSP QG++VTLHDPP   A   DDLTG +   VLQADVV+D D AC ++ESC + AI G +T MQS +GLL+FQ+QTGA+GHGEYF+L+F    + +A R  D R    +    D   +  +  AP P  S F               + L C+S++ PG+ + PF YPPP + + SC
Sbjct:   17 CFQNGVDTACTPREYTDRESSAPFPMNAAHGFNVAHDTIWDGSMADASSGLCARGRPDVQGRCIQSWDA--SLAAVAPIMCPQYAGAGCCTWQQNYALFQNLRTLVDSFGGATGCLACAANLVNLWCALVCSPQQGSYVTLHDPP--RALMDDDLTGAAQLPVLQADVVLDADYACAVFESCSATAIAGASTAMQSAVGLLQFQLQTGAIGHGEYFYLAFDGRAAPNATRSHDVRCPHQLVQREDAEQSTQALPAPEPQYSGFK-------------TDVLQCDSYWYPGSDSPPFPYPPPQQTLTSC 307          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: A0A6H5KYY4_9PHAE (NPC1_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY4_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 8.880e-83
Identity = 114/150 (76.00%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    1 CFQAGVDTECTPEQAK-DGALSFPLDSAHGFGVLHDKVWDGSVENPSTGLCRRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSSTGCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASR 149
            CFQ G+DT+CTP  A+ D A+SFP+DS+HGFGV HDKVWDGSVE+PSTGLC  G PD +GRC+VDFVAPKGL  VAP+ICPQY+D GCCSWQQNYALYQNL  LV+SFGS+TGCLACAVNLVNFWCALVCSPDQGAF ++HDPP+ +A  
Sbjct:  163 CFQFGLDTDCTPIPAEGDTAVSFPMDSSHGFGVFHDKVWDGSVEDPSTGLCDEGRPDSDGRCIVDFVAPKGLKDVAPIICPQYKDSGCCSWQQNYALYQNLGLLVESFGSTTGCLACAVNLVNFWCALVCSPDQGAFASMHDPPFDQAKE 312          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: K3X0G1_GLOUD (NPC1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0G1_GLOUD)

HSP 1 Score: 160 bits (404), Expect = 8.380e-43
Identity = 93/255 (36.47%), Postives = 128/255 (50.20%), Query Frame = 0
Query:   10 CTPEQAKDGALSFPLDSAHGFGVLHDKVWDGSVENPSTGLCRRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSSTG--CLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSF--ANATSDSAKRDAR-------------LQWDMSTLDTHANIIS 246
            C PE     A   P+  A    V       G  +  S G C  G       C+ D +       +  + CP+Y+D  CCSWQQN A+ +N + L ++F ++ G  C ACAVNL+N WC L+CSP Q  F+ +H P  +   R D +TG     VL+ DV +D    C +Y+SC++ AI     GM+S LG L +QMQTGA+GHGEY  L F  AN T+ +   DA                 D+ TL T A ++S
Sbjct:   48 CIPEAHAVPADPQPMRGASWANVTGGGACKGDSDCNSKGSCTNGAC----ACLNDGIVAGAHCELFAIQCPEYKDAACCSWQQNQAMAENFKVLANTFANNDGGGCDACAVNLLNLWCGLMCSPHQADFMRMHLPFPSINHRLDPMTGEENVKVLEMDVTLDKPFTCALYDSCKNTAIASVAEGMKSSLGFLNYQMQTGAIGHGEYMLLHFTSANTTTKATSADAFDHHVFKCSNYSEVTTMDIETLPTQAQLLS 298          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: H3H0H3_PHYRM (NPC1_N domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0H3_PHYRM)

HSP 1 Score: 147 bits (371), Expect = 6.370e-39
Identity = 83/240 (34.58%), Postives = 119/240 (49.58%), Query Frame = 0
Query:    9 ECTPEQAKDGALSFPLDSAHGFGVLHDKVWDGSVENPSTGLCRRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFG--SSTGCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATSDSAKRDARLQWDMSTLDTHANII 245
            EC PE  K  A   P+        +       + +    G C  G       C  D +A         + CP Y+DD CCSWQQN A+ +N + +   F   S+ GC ACA NL+N WC LVCSP+Q  F+ +  P  +   R D +TG     VL+ DV +D D  C +++SC++ A+      M+S LG L +QMQ GAVGHGEY  L F      +A +DA  + D+     ++ ++
Sbjct:   40 ECIPEAHKQPAEPQPMTGDGWPSTIGGGSCTNATDCYGKGQCINGACV----CRQDGMAAGPHCNQFAIQCPAYKDDACCSWQQNQAMAENFKLVASVFAKNSAGGCDACAANLMNLWCGLVCSPEQDQFMQMAHPWPSTNYRPDPMTGKEKVKVLELDVALDKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYISLKF------NASKDASFEHDVLKCSNYSEVV 269          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: A0A8K1CL61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL61_PYTOL)

HSP 1 Score: 148 bits (373), Expect = 2.260e-38
Identity = 89/227 (39.21%), Postives = 120/227 (52.86%), Query Frame = 0
Query:   10 CTPEQAKDGALSFPLDSAHGFGVLHDKVWDGSV----ENPSTGLCRRGTPDEEGRCMVD-FVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSST--GCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATSDSAKRD 228
            C PE     A   P+D     G     V  G      +  + G C RG       C VD   A    D  A + CP+Y+D  CCSWQQN AL QN + +   FG ++  GC ACA NL+  WC ++CSP Q  F+ +H P  + + R D +TG     VL+ DV +  D  C +++SC++ AI   +  M+S LG L +QMQTGA+GHGEY  L F NATS++   D
Sbjct:   46 CIPE-----ANPMPVDPKPMTGAGWANVTGGGACTTDKECNKGACVRGNCV----CQVDGMTAGAHCDDFA-IQCPEYKDAACCSWQQNQALAQNFKLVTTIFGKNSVGGCDACATNLLELWCGMICSPRQSEFMKMHLPYPSNSYRPDPMTGKDHVKVLEMDVTLAKDFTCAVFDSCKNTAIASVSEAMKSSLGFLNYQMQTGAIGHGEYMHLHF-NATSNATAFD 261          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: A0A662XWU5_9STRA (NPC1_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWU5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 5.200e-37
Identity = 69/152 (45.39%), Postives = 96/152 (63.16%), Query Frame = 0
Query:   77 VICPQYEDDGCCSWQQNYALYQNLRTLVDSFG--SSTGCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATSDSA 225
            + CP Y+DD CCSWQQN A+ +N + +   F   S+ GC ACA NL+N WC LVCSP Q  F+ L  P  +   R D +TG     VL+ DV +D D  C +++SC++ A+      M+S LG L +QMQ GAVGHGE+  L+F NA++D++
Sbjct:   12 IQCPAYKDDACCSWQQNRAMAENFQLVASVFARNSAGGCDACAANLMNLWCGLVCSPAQDQFMQLAHPWPSTTYRPDPMTGKERVKVLELDVALDKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEFITLAF-NASADAS 162          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: M4C709_HYAAE (NPC1_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C709_HYAAE)

HSP 1 Score: 134 bits (338), Expect = 4.370e-35
Identity = 73/182 (40.11%), Postives = 102/182 (56.04%), Query Frame = 0
Query:   77 VICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSST--GCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATSDSAKRDARLQWDMSTLD--THANIISRGAPVPT 253
            + CP Y    CCSWQQN A+ +N + L   F  ++  GC ACA NL+  WC LVCSP+Q  F+ L     +   R D LTG     VL+  V +D D  C I++SC++ A+      M+S +G L +QMQ GAVGHGEY  L F NA+ D +       +D S L+   ++ I++R   +PT
Sbjct:   12 IQCPMYMASACCSWQQNEAMAENFKLLASVFAKNSVGGCDACAANLMELWCGLVCSPEQDEFMQLAHAWPSTTFRPDPLTGNERVKVLELFVALDKDFTCAIFDSCKNTAMASMAAAMKSSIGFLNYQMQVGAVGHGEYMTLHF-NASKDKS-------FDSSVLNCSNYSEIVTRRETLPT 185          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: A0A024U1M0_9STRA (NPC1_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1M0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.380e-35
Identity = 68/177 (38.42%), Postives = 100/177 (56.50%), Query Frame = 0
Query:   48 GLCRRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSSTG-CLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATS 222
            G C       +G C+    A    D  A + CP+Y+DD CCSWQQN AL  N + +   FGS  G C ACAVN++  WC LVCSP Q  F+ +H P  + + R D +TG     VL+ +V +     C +++SC++  +V  T  ++S +G L +Q QTG++GHG++ +L F    S
Sbjct:   43 GACSTDADCHKGTCVDGVTAGAHCDDFA-IQCPEYKDDACCSWQQNRALAANFKLISSFFGSDGGGCDACAVNIMQLWCGLVCSPFQADFMQMHMPYPSNSFRLDPMTGVDHVKVLEMNVSLSTPFTCGLFDSCKNTPLVSVTDALKSSVGFLNYQAQTGSIGHGQFMYLQFGRNAS 218          
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Match: A0A2D4C7W7_PYTIN (NPC1_N domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7W7_PYTIN)

HSP 1 Score: 137 bits (346), Expect = 1.190e-34
Identity = 76/209 (36.36%), Postives = 114/209 (54.55%), Query Frame = 0
Query:   77 VICPQYEDDGCCSWQQNYALYQNLRTLVDSFGSSTG--CLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRADDLTGGSGT-VLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKFQMQTGAVGHGEYFFLSFANATSDSAKRDAR-LQWD--MSTLDTHANIISRGAPVPTLSAFSKAKEDHNGGSALALETLSCES 279
            + CP+++D  CC+WQQN  + QN + L   FG + G  C ACA NL+  WC LVCSP Q  F+ +H P  +   R D +T      VL+ DV +     C +++SC++ AI   +  M+S LG L +Q QTGA+GHGEY +L F NATS++   D   L+ D         A++ ++   +P++++   AKE   G      +  S  S
Sbjct:   81 IQCPEHKDAACCTWQQNEGIAQNFKLLASVFGQNDGGGCDACAANLMQLWCGLVCSPRQDEFMKMHLPYPSINHRKDPMTDKDNVKVLELDVTLSKSFTCALFDSCKNTAIASVSEAMKSSLGFLNYQAQTGAIGHGEYMYLHF-NATSNATAFDHHVLKCDNYSEVTSLKASLPAQAQQLPSIASPDAAKECPCGACRATCDAHSSSS 288          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47929.11929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FMI8_ECTSI2.300e-14064.94NPC1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YTW9_9STRA1.250e-10552.27NPC1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5KYY4_9PHAE8.880e-8376.00NPC1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
K3X0G1_GLOUD8.380e-4336.47NPC1_N domain-containing protein n=1 Tax=Globispor... [more]
H3H0H3_PHYRM6.370e-3934.58NPC1_N domain-containing protein n=1 Tax=Phytophth... [more]
A0A8K1CL61_PYTOL2.260e-3839.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XWU5_9STRA5.200e-3745.39NPC1_N domain-containing protein n=1 Tax=Nothophyt... [more]
M4C709_HYAAE4.370e-3540.11NPC1_N domain-containing protein n=1 Tax=Hyalopero... [more]
A0A024U1M0_9STRA6.380e-3538.42NPC1_N domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A2D4C7W7_PYTIN1.190e-3436.36NPC1_N domain-containing protein n=1 Tax=Pythium i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032190Niemann-Pick C1, N-terminalPFAMPF16414NPC1_Ncoord: 78..184
e-value: 4.2E-13
score: 49.4
NoneNo IPR availablePANTHERPTHR45727FAMILY NOT NAMEDcoord: 76..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47929contigH-elongata_contig47929:184..3990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47929.11929.1mRNA_H-elongata_contig47929.11929.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47929 184..3990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47929.11929.1 ID=prot_H-elongata_contig47929.11929.1|Name=mRNA_H-elongata_contig47929.11929.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp
CFQAGVDTECTPEQAKDGALSFPLDSAHGFGVLHDKVWDGSVENPSTGLC
RRGTPDEEGRCMVDFVAPKGLDPVAPVICPQYEDDGCCSWQQNYALYQNL
RTLVDSFGSSTGCLACAVNLVNFWCALVCSPDQGAFVTLHDPPYAEASRA
DDLTGGSGTVLQADVVVDGDLACRIYESCRSVAIVGETTGMQSGLGLLKF
QMQTGAVGHGEYFFLSFANATSDSAKRDARLQWDMSTLDTHANIISRGAP
VPTLSAFSKAKEDHNGGSALALETLSCESFYNPGTKNVPFAYPPPTKDID
SCRQDH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032190NPC1_N