prot_H-elongata_contig4785.11922.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4785.11922.1
Unique Nameprot_H-elongata_contig4785.11922.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length619
Homology
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: D8LPM9_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM9_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 8.700e-79
Identity = 265/766 (34.60%), Postives = 312/766 (40.73%), Query Frame = 0
Query:   85 TPFYKAGDLVDVLSRSSPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAVNPAIMSPYTLDDECDTVRANG------------------------GSDGNRGGERQALAPSPSAASVSVRRTHRRGSCPPDAAVGQANAACLNLILGDTQHPGLDLDPGLVEDLDPETRRQHSGNTLVGMEGGSVC-----------------------------------------------------------------------------------------VSGSNSAACGKGKGNSKERRDPRCDAKRKNVEEREDEKNKSAV--GSKQGVGG--------------------------------------------------------------------------------KRTR-----EGETGRRPAP--RDNASAVASXXXXXXXXXXXXXXDPR-----------RGRERRVV----------------LTLSSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSRLAHAEPDRPGLFCGTTFHLRGHFGKD-SPPLCELEAMLLANGGTVVRTIGALFAQGGGGSSGSSGSGRRDSKGSCSSGTWRPPRVVIFQPSASSTKG---DVQTLARDLALHTIVGPSPGSEKVGRRDRAGGAKQEGDHV----EVVKPSWLVDSVGCFRVLQPTVVHRVP 613
            TP +KAGDLV V SRSSPGVNKEGGVA+VT V  DGT DVKY V HG EK V   I+S Y +D                                  GS           APS    S  VRRT R+G C PD A GQA AACL+ +LG+TQHP LDLDP L E LDP      +G+   G  GG V                                                                                          VS        +G+G           +      E  +  + SA+  GS  G  G                                                                                KR R       E G RP    +  +    +   XXXXXXXXX  D R            GR  +                  LT+S  + EM  +A+SLA S  WR+ PKYTE VTHVVCG  P+T KA +RS KFLRAVA GKWVV E WLQE + RG   +EEAFE++GD+KS VPSAP RSRLAHA+ DRPGLF G  FH RG FG   SPPL +LE+MLLAN G VV T+G+L     G  S   GSG            WRP +VVIFQPS+        + + LA  LA    +    GSE   R     G  ++ D V    +VV+P WLVDSVGCFRVL+P V HRVP
Sbjct:  229 TPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGSSSRSSTPASKEAPS----SSRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSGAGS--AGDGGGKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDERQVSDDVEGGPSQGQGRXXXXXXXXISSSANEASEGMEVFDISALSAGSNSGDNGMTLLTTAPPLDSEGRGGGGGDNHDXXXXXXXXXXXXXXXXXAVPLPTATVDFNSHGGXXXXXSGSRSRGRAAAPPTAAVRKRCRPPGSESAEVGGRPVTSGKGKSKTAKAGGSXXXXXXXXXGVDGRGDGGGLQGACANGRRGQATSXXXXXXXXXXXXXXXLTMSGSSSEMSKLADSLAKSRGWRVEPKYTEAVTHVVCGTVPKTAKARVRSVKFLRAVAGGKWVVTEAWLQECRRRGCRAEEEAFEVAGDKKSHVPSAPTRSRLAHADVDRPGLFQGIMFHFRGQFGTTGSPPLSDLESMLLANAGKVVSTLGSLC----GARSIPLGSGSGXXXXXXXXXGWRPRKVVIFQPSSPDEDQRAMEEKKLAAALAAEAEL-LRQGSESAPRGGXXWGRDEDEDGVGVVVDVVRPIWLVDSVGCFRVLKPAVHHRVP 983          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: A0A6H5KV73_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV73_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 6.280e-70
Identity = 242/751 (32.22%), Postives = 295/751 (39.28%), Query Frame = 0
Query:   85 TPFYKAGDLVDVLSRSSPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAVNPAIMSPYTLDDECDTVRANGGSDGNRG-----------------------GERQALAPSPSAASVSVRRTHRRGSCPPDAAVGQANAACLNLILGDTQHPGLDLDPGLVEDLDPETRRQHSGNT--------------------------------LVGMEGGSVCVS----GSNSAACGKG-------------KGNSKERRDPRCDAKRKNVEERED-----------------------------------EKNKSAVGSKQGV--------------------------------------------------------GGKRTREGETGRRPAP---------RDNASAVASXXXXXXXXXXXXXXDPRRGRE-------------------------------RR---------------VVLTLSSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSRLAHAEPDRPGLFCGTTFHLRGHFGKD-SPPLCELEAMLLANGGTVVRTIGALFAQGGGGSSGSSGSGRRDSKGSCSSGTWRPPRVVIFQPSASSTKGDVQTLARDLALHTIVGPSPGSEKVGRRDRAGGAKQEGDH---VEVVKPSWLVDSVGCFRVLQPTVVHRVP 613
            TP +KAGDLV V SRSSPGVNKEGGVA+VT V  +GT DVKY V HG EK V   I+S Y +D                                            A   +PS++S  VRRT R+G C PD A GQA AACL+ +LG+TQHP LDLDP L E LDP      +G+                                   G +G +V VS    GS+    G+G             +G   +  D     + +N  +  D                                   + + S+ GS  G                                                         GG  +     GR  AP         R + S  A                 + GR                                RR               VVLT+S  T E   +A+SLA    W++ PKYTE VTHVVCG  P+T KA +RS KFLRAVA GKWVV E WLQE + RG   +EEAFE++GD+KS VPSAP RSRLAHA+ DRPGLF G TFH RG FG   SPPL +LE+MLLAN G VV T+G+L     G  S + GS                                         L      S    +   R   G  + +G     V+VV+P WLVDSVGCFRVL+P V HRVP
Sbjct:  879 TPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPNGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTPASKGAPSSSSR-VRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSRAGSAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKEGDDGVTVVVSDRGVGSSGGEGGQGSVKGVVGKRKRIARGGGVDDDDTTRGDRGRNERQASDGVEGGPSQGQGRRHXXXXXXXXXXXXXXXXXXXVFDISASSAGSNSGDNGMALLTTAPPLDYEGRGGGDXXXXXXXXXXXXXXXXXXXXXAPLPAAAVDSNIHGGGXXSGSRSRGRAAAPPTAAVRKRCRPSGSESAEVDGRPVTSGKGKGKTVKAGRSXXXXXXXXXXXRSGVDGRGDXXGLQGACANGRRGLATSAAAVAEEDGAVVLTMSGSTSETSKLADSLAKRLGWQVEPKYTEAVTHVVCGTVPKTAKARVRSVKFLRAVAGGKWVVTEAWLQECRRRGCRAEEEAFEVTGDKKSHVPSAPTRSRLAHADVDRPGLFQGITFHFRGQFGTTGSPPLSDLESMLLANAGKVVSTLGSLC----GARSTAVGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAETELSRQGSESAPRGGGGCGRDDGGVGVVVDVVRPIWLVDSVGCFRVLKPAVHHRVP 1624          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: A0A2R5G0G9_9STRA (E3 ubiquitin-protein ligase LNX n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0G9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.510e-12
Identity = 111/453 (24.50%), Postives = 179/453 (39.51%), Query Frame = 0
Query:   86 PFYKAGDLVDVLSRSSPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAVNPAIMSPYTLDDECDTVRANGGSDGNRGGERQALAPSPSAASVSVRRTHRRGSCP-----PDAAVGQANAA--CLNLILGD-TQHPGLDLDPGLVEDLDPETRRQHSGNTLVGMEGGSVCVSGSNSAACGKGKGNSKERRDPRCDAKRKN----------------------VEEREDEKNKSAVGSKQGVG----GKRTREGETGRRPAPRDNASAVASXXXXXXXXXXXXXXDPRRGRERRVVLTLSSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANI---RSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPS--APRRSRLAHAEP--DRPGLFCGTTFHLRGHF-GKDSPPLCELEAMLLANGGTVVR 496
            P +  GD V V  R  PG+NK GGV ++T+V++DGTYD++Y +    EK V  AI     +D    ++          G   Q+   +P     S R   +R S P     P++ + QA  A  C      +  Q                +  R+      +      V +  +N A       ++KE    R   KR++                        + ++E   +A G  +  G     K T+     R P P    S+                      +   +VLT  S       + + +   H   +  + TE  TH+V     + ++  I   R+ K++RA+A+G W+V+  W+++S      + E  +E+ GD K+   S   P+RSR AHA+      GLF G T  L G F G   PP  +LE++    GGT++R
Sbjct:  674 PRFALGDFVTVARRMQPGMNKPGGVGKITKVHSDGTYDIRYALDGRREKMVE-AIHLTSGIDVNSTSLL---------GSHTQSTPATPVMQQWSARGRPKRRSAPRDRFDPESFISQAEIAQFCRTSEKAEEAQEXXXXXXXXXXXXXXXKGGRERQPLQRLPSRSSRV-LDAANEAKTDTNVQDAKETSSSR--GKRRSGXXXXXXXXXXXXXXXXRSASPTPQSDEEVLPTAAGDTKASGPAKKSKSTKRRTRSRSPGPEVALSST---------------------KRPTIVLTSLSSEARRQNIVDDIYNLHG-EVELEDTERATHLVVPCIRKASQGRIAKARTLKYVRAIAAGLWIVDVRWVRDSANANAWLAEGPYEIQGDMKTIGLSRDGPKRSREAHAQDKDSGKGLFAGVTMFLCGSFAGSRVPPKRDLESIFAMCGGTLIR 1091          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: A0A4D9D2G0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2G0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.350e-8
Identity = 47/159 (29.56%), Postives = 77/159 (48.43%), Query Frame = 0
Query:  337 DPRRGRERRVVLTLSSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSRLAHAEPDRPGLFCGTTFHLRGHFGKDSPPLCELEAMLLANGGTVV 495
            D  R   + +V+  +SL   ++   ++ A     R+       VTHV+  A  R  +A  R+ K+L  + + +WV++  WL  S  +G+   E   E+ GD K+T PSAP ++RL+  +   P LF        G F    P   +LE+++ A  G VV
Sbjct:  417 DSYRTHPQDIVILPTSLPHSLLGSLDAFARRFDARVTKLPGPQVTHVLARADGR-RRAETRTIKYLHGILARRWVLSPSWLTVSLAKGKVEAEVRHEIVGDPKATEPSAPTKARLSRYK-QIPPLFAAYRVVFGGDFPPPRPTRRDLESLVKAGDGRVV 573          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: D8U2B1_VOLCA (RING-type E3 ubiquitin transferase BRCA1 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U2B1_VOLCA)

HSP 1 Score: 68.2 bits (165), Expect = 4.060e-8
Identity = 64/194 (32.99%), Postives = 89/194 (45.88%), Query Frame = 0
Query:  309 RRPAPRDNASAVASXXXXXXXXXXXXXXDPRRGRERRVVLTL-SSLTPEMVAVAESLAAS-HSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSRLAHAEPDRPGLFCGTTF---HLRGHFGKD-SPPLCELEAMLLANGGTVVR 496
            RRP PR+  SA A+                   R  +++  L S L PE  A  + L  +     ++ +    +TH+V        +A  R+ K+LRAV  G WVV   W+ E    G  + E  FE +GD  +T    P  +RL     D P LF G  F    L+G F +  + P  ELEA+LLA GGT+VR
Sbjct:  962 RRPKPRERGSAAAAMASPEPALMHELSAPGPSARRPKLLYVLPSGLGPEERAKVKELTRNVRGLELLSEVQPHLTHLVVQLNAE-RRAVGRTIKYLRAVIQGCWVVGMDWVCECLAAGRLLPEGPFEATGD--ATHAGTPTTTRLRLERGDPP-LFSGLKFCVTFLKGSFDRGITKP--ELEALLLAAGGTLVR 1149          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: A0A8J2X388_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X388_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.610e-7
Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   86 PFYKAGDLVDVLSRSSPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAVNPAIMS 142
            P Y  GDLV+V    SPG N+EGG  RVT VN+DGTYDVKY +  GT + V  A MS
Sbjct:  238 PPYSVGDLVEVKPDWSPGCNREGGPGRVTAVNSDGTYDVKYSLGRGTMQGVPLADMS 294          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: UPI0018D18CDD (breast cancer type 1 susceptibility protein homolog n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D18CDD)

HSP 1 Score: 64.7 bits (156), Expect = 4.780e-7
Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 0
Query:  342 RERRVVLTLSSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSRLAHAEPDRPGLFCGTTFHLRGHFGKDSPPLCELEAMLLANGGTV 494
            + +++V+  S L+       + L     W+ V KYT D+TH+V  +     KA  RS K++ A+A+GKW+V   W+++        +EE FE      ST    PRRSRLA  +     +F G TF     F      +  L++ML A GGT+
Sbjct: 1095 KNKKLVIAGSCLSATEQTNLKILCFKRKWKFVDKYTPDLTHLVV-SVDEEFKAQ-RSVKYMCALAAGKWIVANKWVEKCLESNTLYEEEPFEALD---STGDPGPRRSRLATRK-----VFEGITFFCMPPFSVLD--IDTLKSMLAAAGGTI 1235          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: W9QZP3_9ROSA (Protein BREAST CANCER SUSCEPTIBILITY 1-like protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QZP3_9ROSA)

HSP 1 Score: 62.0 bits (149), Expect = 2.610e-6
Identity = 48/164 (29.27%), Postives = 77/164 (46.95%), Query Frame = 0
Query:  343 ERRVVLTLSSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAKFLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSRLAHAEPDRPGLFCGTTFHLRGHFGKDSPPLCELEAMLLANGGTVVRTIGALFAQGG 506
            ER++    S+L+ E   +       +   +   +  +VTHV+   A     A  R+ KFL A+ +GKW+V   W++       HV EE +E+S D      + P   R   A  + P LF G  F+  G F        +L+ +++A GGTV+++   L AQ G
Sbjct:  461 ERKLFFCGSALSAEEKILLVKFGTINGATVSKFWNPNVTHVI--VATNDVGACTRTFKFLMAILTGKWIVKVDWIKACMGAKCHVNEEPYEVSLDNYGCR-NGPLSGR-GRASKNAPKLFSGLNFYFAGDFLASHKE--DLQDLVIAAGGTVLKSKEELVAQSG 618          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: A0A485KVR3_9STRA (Aste57867_12351 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVR3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.010e-6
Identity = 48/134 (35.82%), Postives = 61/134 (45.52%), Query Frame = 0
Query:   89 KAGDLVDVLSRSSPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAVNPAIMSPYTLDDECDTVRANGGSDGNRGGERQALAPSPSAASVSVRRTHRRGSCPPDAAVGQANAACLNLILGDTQHPGLDLDPGL 222
            K G LV V  R  PG+NKEGGVARV RVN DGT +VKY V  G ++ + PA +     D+       +  S  N              A++SV RT R        A  +A AA +     DT     DL P +
Sbjct:   33 KQGTLVMVDPRFWPGMNKEGGVARVERVNQDGTVNVKYVVVGGRDRNIPPACIHVTAADETLTPTTRSSRSQHNN-------------AALSVMRTRR--------AAKEATAASVEDDKTDTSLSDDDLRPSM 145          
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Match: A0A7S2RRG2_9STRA (RING-type E3 ubiquitin transferase BRCA1 n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RRG2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.610e-5
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 0
Query:   81 PSLKTPFYKAGDLVDVLSRSSPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAV 136
            P    PF+  G+ V V  R  PG NK GG A++T+VN D TYDV+Y V   TEK V
Sbjct:  616 PERVAPFFVVGNTVTVSRRMYPGSNKPGGAAKITKVNDDDTYDVRYIVARNTEKRV 671          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4785.11922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LPM9_ECTSI8.700e-7934.60BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KV73_9PHAE6.280e-7032.22BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A2R5G0G9_9STRA4.510e-1224.50E3 ubiquitin-protein ligase LNX n=1 Tax=Hondaea fe... [more]
A0A4D9D2G0_9STRA1.350e-829.56Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D8U2B1_VOLCA4.060e-832.99RING-type E3 ubiquitin transferase BRCA1 n=1 Tax=V... [more]
A0A8J2X388_9STRA2.610e-757.89Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
UPI0018D18CDD4.780e-732.68breast cancer type 1 susceptibility protein homolo... [more]
W9QZP3_9ROSA2.610e-629.27Protein BREAST CANCER SUSCEPTIBILITY 1-like protei... [more]
A0A485KVR3_9STRA7.010e-635.82Aste57867_12351 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2RRG2_9STRA1.610e-550.00RING-type E3 ubiquitin transferase BRCA1 n=2 Tax=l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 338..424
e-value: 7.7E-4
score: 28.8
coord: 459..601
e-value: 19.0
score: 9.8
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 362..434
score: 9.751
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 343..451
e-value: 5.1E-21
score: 76.9
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 458..613
e-value: 4.1E-6
score: 28.5
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 456..605
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 346..451
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 268..604
IPR011364Breast cancer type 1 susceptibility protein (BRCA1)PANTHERPTHR13763:SF0BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEINcoord: 268..604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4785contigH-elongata_contig4785:6779..9276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4785.11922.1mRNA_H-elongata_contig4785.11922.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4785 6317..10534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4785.11922.1 ID=prot_H-elongata_contig4785.11922.1|Name=mRNA_H-elongata_contig4785.11922.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=619bp
MYGVESDRPTSGPASDVFEDATPSGPPSETGNVDVALRGSNCRSSASAAP
STPDESAKRSQAESQLPPRQMMPPPPPSPSPSLKTPFYKAGDLVDVLSRS
SPGVNKEGGVARVTRVNADGTYDVKYCVRHGTEKAVNPAIMSPYTLDDEC
DTVRANGGSDGNRGGERQALAPSPSAASVSVRRTHRRGSCPPDAAVGQAN
AACLNLILGDTQHPGLDLDPGLVEDLDPETRRQHSGNTLVGMEGGSVCVS
GSNSAACGKGKGNSKERRDPRCDAKRKNVEEREDEKNKSAVGSKQGVGGK
RTREGETGRRPAPRDNASAVASSSDSGGGAMVAAASDPRRGRERRVVLTL
SSLTPEMVAVAESLAASHSWRIVPKYTEDVTHVVCGAAPRTNKANIRSAK
FLRAVASGKWVVNEGWLQESQLRGEHVKEEAFELSGDRKSTVPSAPRRSR
LAHAEPDRPGLFCGTTFHLRGHFGKDSPPLCELEAMLLANGGTVVRTIGA
LFAQGGGGSSGSSGSGRRDSKGSCSSGTWRPPRVVIFQPSASSTKGDVQT
LARDLALHTIVGPSPGSEKVGRRDRAGGAKQEGDHVEVVKPSWLVDSVGC
FRVLQPTVVHRVPRPHRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf
IPR031099BRCA1-associated
IPR011364BRCA1