prot_H-elongata_contig47831.11919.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47831.11919.1
Unique Nameprot_H-elongata_contig47831.11919.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
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BLAST of mRNA_H-elongata_contig47831.11919.1 vs. uniprot
Match: D8LQM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM8_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.260e-19
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0 
Query:    1 VKRQTFHLPHPVLSLGGRARILLLGMTQRQTLSQHMGETANHYHICISYAALAGTILHACNLVD 64
            +KRQ F+LP P++S GGR RI LLGM QRQTL + +G TANHYH CISYAAL GT L +C++ +
Sbjct:  249 MKRQQFNLPRPIVSFGGRVRIRLLGMAQRQTLPESVGATANHYHTCISYAALCGTFLLSCSIAN 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47831.11919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQM8_ECTSI2.260e-1962.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47831contigH-elongata_contig47831:3680..3871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47831.11919.1mRNA_H-elongata_contig47831.11919.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47831 3680..3871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47831.11919.1 ID=prot_H-elongata_contig47831.11919.1|Name=mRNA_H-elongata_contig47831.11919.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
VKRQTFHLPHPVLSLGGRARILLLGMTQRQTLSQHMGETANHYHICISYA
ALAGTILHACNLVD
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