prot_H-elongata_contig4779.11912.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4779.11912.1
Unique Nameprot_H-elongata_contig4779.11912.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 6.140e-16
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            FA+PV+E +APGYI+AILRPMDLGT+R R EG  Y  +  LQ+DL+LVVAN  +Y++P T+F
Sbjct: 1870 FAEPVSEAAAPGYISAILRPMDLGTVRGRLEGRRYRDVSELQDDLLLVVANCFTYNSPGTMF 1931          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 6.150e-16
Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            FA+PV+E++APGYI+AILRPMDLGT+R R EG  Y  +  LQ+DL+LVVAN  +Y++P T+F
Sbjct: 1898 FAEPVSESAAPGYISAILRPMDLGTVRGRLEGRRYRDVAELQDDLLLVVANCFTYNSPGTLF 1959          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A061QRC8_9CHLO (Bromodomain-containing protein 7/9 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QRC8_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 4.860e-9
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            F +PVTE  APGY   I  PMD  T+R R     Y S D L+ DLVL+  N ++Y+ P+T+F
Sbjct:  271 FREPVTEDLAPGYFDVISNPMDFTTIRARISEERYASWDELEEDLVLMFDNAMTYNGPETLF 332          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A4C1ZGT1_EUMVA (Bromodomain-containing protein 8 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZGT1_EUMVA)

HSP 1 Score: 58.9 bits (141), Expect = 1.290e-8
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPD 59
            F  P+T+  APGY AA+ RPMDLGT++R  + GV  +    Q D++L+++N L Y++ D
Sbjct:  933 FLRPITDEQAPGYSAAVRRPMDLGTIKRNIDSGVIRTTAEFQRDVLLMLSNALMYNSSD 991          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A444TJR3_ARMVU (Bromodomain-containing protein 1 (Fragment) n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TJR3_ARMVU)

HSP 1 Score: 55.5 bits (132), Expect = 4.740e-8
Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            FA+PV     P Y+  +  PMDL TMR++A+   Y ++D    D  L++ N L+Y+A DT+F
Sbjct:   32 FAEPVDFEEVPDYLDVVKHPMDLSTMRQKAQAHQYQNVDQFAADFDLMIDNCLTYNAKDTVF 93          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: F0WAA9_9STRA (Uncharacterized protein AlNc14C44G3638 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAA9_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.570e-7
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            FADPV ET  P Y   I  PMDL TMR +AEGG Y S    ++D  L++ N LS++   TI+
Sbjct:  472 FADPVPET-VPNYRKTIQNPMDLSTMRGKAEGGDYQSAKSFRDDFNLMIQNCLSFNPETTIY 532          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A8J6HLR3_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HLR3_TENMO)

HSP 1 Score: 55.8 bits (133), Expect = 1.570e-7
Identity = 23/62 (37.10%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            F++PV     P Y   +  PMDL TMR++ + G+Y  +  ++ D  L++AN L+Y+  DT+F
Sbjct:  106 FSEPVDLEEVPDYTTVVAEPMDLSTMRKKLDDGLYPDLTSMEKDFDLMIANCLAYNNRDTVF 167          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A8B7NN02_HYAAZ (peregrin-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NN02_HYAAZ)

HSP 1 Score: 54.7 bits (130), Expect = 4.040e-7
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDTIF 62
            FA+PV       Y   +  PMDL TMR +A+   Y S+D L+ D  L++ N L+Y+A DTIF
Sbjct:  739 FAEPVDLEEVKDYSDVVSCPMDLSTMREKAQNHAYASIDDLEKDFNLMIDNCLAYNAKDTIF 800          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: A0A8H7SEW7_9FUNG (Transcription initiation factor TFIID subunit 2 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SEW7_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 5.560e-7
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 FADPVTETS--APGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDT 60
            F  PV E +  APGY AAI +PMDLGT+R + E G Y +   + +D+ L++ N  +Y+ P T
Sbjct: 1380 FLQPVDEETDGAPGYYAAIKKPMDLGTIRTKLEKGEYTTYQQMDDDIRLMLNNCFAYNGPGT 1441          
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Match: G0U722_TRYVY (Bromo domain-containing protein n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0U722_TRYVY)

HSP 1 Score: 53.1 bits (126), Expect = 1.000e-6
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0
Query:    1 FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVANFLSYDAPDT 60
            F  PV+ T  P Y   + RP+DL T++R  E G Y +   +QND+ L++AN L Y+A  T
Sbjct:   31 FHHPVSATELPDYHTVVKRPIDLSTIQRGIENGTYTAEAEVQNDVALMIANALEYNAKGT 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4779.11912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEP1_ECTSI6.140e-1661.29WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5KTA2_9PHAE6.150e-1661.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A061QRC8_9CHLO4.860e-946.77Bromodomain-containing protein 7/9 (Fragment) n=2 ... [more]
A0A4C1ZGT1_EUMVA1.290e-844.07Bromodomain-containing protein 8 n=1 Tax=Eumeta va... [more]
A0A444TJR3_ARMVU4.740e-840.32Bromodomain-containing protein 1 (Fragment) n=1 Ta... [more]
F0WAA9_9STRA1.570e-748.39Uncharacterized protein AlNc14C44G3638 n=1 Tax=Alb... [more]
A0A8J6HLR3_TENMO1.570e-737.10Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A8B7NN02_HYAAZ4.040e-743.55peregrin-like n=1 Tax=Hyalella azteca TaxID=294128... [more]
A0A8H7SEW7_9FUNG5.560e-743.55Transcription initiation factor TFIID subunit 2 n=... [more]
G0U722_TRYVY1.000e-641.67Bromo domain-containing protein n=1 Tax=Trypanosom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 44..62
score: 26.3
coord: 10..26
score: 44.37
coord: 26..44
score: 21.62
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..60
e-value: 6.7E-13
score: 48.5
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..62
score: 14.486
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..62
e-value: 1.4E-14
score: 55.6
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..61
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 1..62
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4779contigH-elongata_contig4779:10903..11088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4779.11912.1mRNA_H-elongata_contig4779.11912.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4779 10903..11088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4779.11912.1 ID=prot_H-elongata_contig4779.11912.1|Name=mRNA_H-elongata_contig4779.11912.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
FADPVTETSAPGYIAAILRPMDLGTMRRRAEGGVYGSMDMLQNDLVLVVA
NFLSYDAPDTIF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf