prot_H-elongata_contig47740.11908.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47740.11908.1
Unique Nameprot_H-elongata_contig47740.11908.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig47740.11908.1 vs. uniprot
Match: A0A6H5KUC4_9PHAE (Apt1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 7.850e-26
Identity = 55/73 (75.34%), Postives = 65/73 (89.04%), Query Frame = 0 
Query:    1 RTVSATNRLNRAVRALKLKLQQRPNTHLFLCLKRLRLELWRDESSSPFLRAEVRRITADVMIYDDSSGSLDIQ 73
            R++ A+  L +AVR LK KLQQRPNTHL L LKRL+LELWRDESS+PFLRAEVRR+TADVM+YDDSSGS+D+Q
Sbjct:  833 RSMLASELLRKAVRLLKQKLQQRPNTHLVLHLKRLKLELWRDESSTPFLRAEVRRVTADVMVYDDSSGSVDLQ 905
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BLAST of mRNA_H-elongata_contig47740.11908.1 vs. uniprot
Match: D7G7J9_ECTSI (Apt1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J9_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.690e-25
Identity = 54/73 (73.97%), Postives = 65/73 (89.04%), Query Frame = 0 
Query:    1 RTVSATNRLNRAVRALKLKLQQRPNTHLFLCLKRLRLELWRDESSSPFLRAEVRRITADVMIYDDSSGSLDIQ 73
            R++ A+  L +AVR LK KLQQRPNTHL L LKRL+LELWRDES++PFLRAEVRR+TADVM+YDDSSGS+D+Q
Sbjct:  338 RSMLASELLRKAVRLLKQKLQQRPNTHLALHLKRLKLELWRDESNAPFLRAEVRRVTADVMVYDDSSGSVDLQ 410
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47740.11908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUC4_9PHAE7.850e-2675.34Apt1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G7J9_ECTSI2.690e-2573.97Apt1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47740contigH-elongata_contig47740:648..3155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47740.11908.1mRNA_H-elongata_contig47740.11908.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47740 648..3155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47740.11908.1 ID=prot_H-elongata_contig47740.11908.1|Name=mRNA_H-elongata_contig47740.11908.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
RTVSATNRLNRAVRALKLKLQQRPNTHLFLCLKRLRLELWRDESSSPFLR
AEVRRITADVMIYDDSSGSLDIQASGSGEYVE*
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