prot_H-elongata_contig47728.11907.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47728.11907.1
Unique Nameprot_H-elongata_contig47728.11907.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
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BLAST of mRNA_H-elongata_contig47728.11907.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 60.8 bits (146), Expect = 6.780e-8
Identity = 41/90 (45.56%), Postives = 49/90 (54.44%), Query Frame = 0 
Query:   62 RSGGCGLTSSSDIRDAAFIGSQALVLARAVAKVAGPNVSAFLERLPNTPCATAPIKSHKAISQTAKPHEIAGAVGTPWTAIALRQDLCNR 151
            R GG G+ S+ DI   AFIG QALVLARA+      N+S  L  L  TP A A     + + + A   EI   VGT W AIAL +D  NR
Sbjct: 1586 REGGLGIPSTVDISGPAFIGGQALVLARALVATNATNLSHELAVLAETPYAQALTGELRKLPKYASGSEITEMVGTSWAAIALNKDPANR 1675
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47728.11907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN6.780e-845.56Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47728contigH-elongata_contig47728:1619..2141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47728.11907.1mRNA_H-elongata_contig47728.11907.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47728 1619..2247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47728.11907.1 ID=prot_H-elongata_contig47728.11907.1|Name=mRNA_H-elongata_contig47728.11907.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
MPSHLPDLAAIGRRPHGLHSMHCPPGHYESPDGRVRPYARVGFSERARQD
SHPPMKSETTHRSGGCGLTSSSDIRDAAFIGSQALVLARAVAKVAGPNVS
AFLERLPNTPCATAPIKSHKAISQTAKPHEIAGAVGTPWTAIALRQDLCN
R
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