prot_H-elongata_contig4770.11904.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig4770.11904.1
Unique Name	prot_H-elongata_contig4770.11904.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	208

Homology

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.450e-121
Identity = 172/201 (85.57%), Postives = 189/201 (94.03%), Query Frame = 0

Query:    1 MCQRETEGKDHMAERDEDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLE 201
            M +R+TEGKDHM + DED LE+PDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNA+L+DG EVKVD WDTAGQERFSSMH SYY+RAHA ++VFDVTRKATYKNL++WYGELRQY ESIPCLL+ANKIDVDY VTKKSFKFAQQH LPF+FVSAADGTNVVK F+EA+KAG+EFKKNGGDFVDEAL+LLE
Sbjct:    1 MSERKTEGKDHMEDGDED-LEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKVDFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFDEAVKAGMEFKKNGGDFVDEALSLLE 200

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 315 bits (806), Expect = 3.630e-107
Identity = 151/187 (80.75%), Postives = 170/187 (90.91%), Query Frame = 0

Query:   16 DEDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLES 202
            D DDL +PDLKVILLGDSAVGKSKLVERYLMDEY+PRQLSTFALTLFRKNA LEDGT   VD WDTAGQERF+SMH SYY+RAHA ++VFDVTRKATYKNL +WYGELRQ+CESIPC+LVANKIDVDYNVTKK FKFA QH LPF+FVSAADG NVV++FEEAI+  +E K++GGDFV++ALTLL+S
Sbjct:   11 DTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLDS 197

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA)

HSP 1 Score: 284 bits (726), Expect = 8.590e-95
Identity = 133/183 (72.68%), Postives = 157/183 (85.79%), Query Frame = 0

Query:   19 DLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLE 201
            DL +PD K+ILLGDSAVGKSKLVERYLMDEYNPRQLST+ALTL+RK   LE+G    +DLWDTAGQERF+S+H SYY+ AH  +LVFDVTRK TY++L++WYGELRQYCESIPC+LVANKIDVDY VTKKSFKFA Q+ LPF+FVSAADGTNVVK+F EA++ G+ FKKN  DF+ E +  L+
Sbjct:   28 DLGDPDCKIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDIDLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTKKSFKFASQYELPFFFVSAADGTNVVKVFHEAVRLGINFKKNNPDFMTEVIEFLK 210

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL)

HSP 1 Score: 271 bits (692), Expect = 9.420e-90
Identity = 132/191 (69.11%), Postives = 157/191 (82.20%), Query Frame = 0

Query:   14 ERDEDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLED----GTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLL 200
            E+ +DDL EPD+KVILLGDSAVGKSKLVER++M+E+ PRQLSTFALTLFRK   + D       +KVD WDTAGQERFSSMH SYY+ A A ++VFDVTRK TY+NLT WY ELR+YCE+IPC LVANKIDVD NVT K FKF++ H LPF FVSAADGTNVVK+F++A+KA  +FKK+GGDF+ + L LL
Sbjct:    6 EKPDDDLGEPDVKVILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTGWYKELREYCENIPCFLVANKIDVDLNVTSKKFKFSETHNLPFEFVSAADGTNVVKVFQDAVKAAYQFKKDGGDFMADVLDLL 196

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A024TW89_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TW89_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.100e-89
Identity = 129/190 (67.89%), Postives = 154/190 (81.05%), Query Frame = 0

Query:   17 EDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLESSTIN 206
            +D L +PD+K+ILLGDSAVGKSKLVERY+M+EY PRQLSTFALTLFRK+  + DG  VK+D WDTAGQERF+SMHSSYY  A A +LVFDVTRK TY++L +WY ELR+YCE++PC L ANK+DVD  VT K FKFA+ H L F FVSAADGTNVVK+FEEAI+A L+FK  GGDFV + L  L  S ++
Sbjct:   10 DDGLGDPDVKIILLGDSAVGKSKLVERYMMNEYQPRQLSTFALTLFRKDFTMPDGKTVKIDFWDTAGQERFNSMHSSYYFGAAACILVFDVTRKTTYQHLADWYKELREYCETVPCFLAANKVDVDVEVTNKKFKFAETHNLGFSFVSAADGTNVVKLFEEAIQAALKFKSEGGDFVSDVLDFLNDSPLD 199

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV)

HSP 1 Score: 270 bits (689), Expect = 2.700e-89
Identity = 130/184 (70.65%), Postives = 153/184 (83.15%), Query Frame = 0

Query:   17 EDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLL 200
            ED L + DLK+ILLGDSAVGKSKLVER++M+EY PRQLSTFALTLFRK   ++DG+  K+D+WDTAGQERFSSMH SYY  A A +LVFDVTRK TY++L +WY ELR+YCE++PC L ANKIDVD  VT K FKFA+ H L F+FVSAADGTNVVKIFEEAI AGL++KK GGDF+ + L LL
Sbjct:   12 EDGLGDADLKIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKIDIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTNKKFKFAETHNLGFHFVSAADGTNVVKIFEEAIHAGLKYKKEGGDFMADVLDLL 195

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A6G0WRD6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRD6_9STRA)

HSP 1 Score: 271 bits (692), Expect = 2.870e-89
Identity = 130/191 (68.06%), Postives = 155/191 (81.15%), Query Frame = 0

Query:   17 EDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLESSTINS 207
            +D L +PD+K+ILLGDSAVGKSKLVERY+M+EY PRQLSTFALTLFRK+ +LEDGT  K+D WDTAGQERF+SMH+SYY  A A +LVFDVTRK TY++L +WY ELR+YCESIPC L ANK+DVD  VT K FKFA+ H L F FVSAADGTNVVK+FE+ I A L+ KK GGDF+ + L LL+  +  S
Sbjct:   11 DDGLGDPDVKIILLGDSAVGKSKLVERYMMNEYQPRQLSTFALTLFRKDFQLEDGTTAKIDFWDTAGQERFNSMHASYYFGASACILVFDVTRKTTYQHLADWYKELREYCESIPCFLAANKVDVDLEVTNKKFKFAETHNLSFSFVSAADGTNVVKLFEDTIHAALKHKKEGGDFMSDVLDLLDEPSDRS 201

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A8J2WYL7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYL7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 3.190e-89
Identity = 127/190 (66.84%), Postives = 158/190 (83.16%), Query Frame = 0

Query:   14 ERDEDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLESS 203
            E D +DL   D+K+ILLGDSAVGK+KLVER+LMDEYNP+QLST+ALT+FRKN  + DG  VKVD+WDTAGQERF+ MH +YYHRAHA +L FDVTRKATY++L  WY E+R  CE+IPC+LVANKID+DY VTKK+FKFA    +PFYFVSAADGTNVVK+F  A+++ L++K N GDF++EA  LL+ +
Sbjct:   18 ETDPNDLSPADVKIILLGDSAVGKTKLVERFLMDEYNPQQLSTYALTMFRKNLDI-DGKNVKVDIWDTAGQERFNKMHPAYYHRAHACILCFDVTRKATYQHLGAWYDEMRDACENIPCILVANKIDIDYQVTKKNFKFASSKNIPFYFVSAADGTNVVKVFRAAVESALDYKDNSGDFMNEAYKLLDDA 206

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A7S2XUJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUJ5_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.700e-88
Identity = 129/199 (64.82%), Postives = 159/199 (79.90%), Query Frame = 0

Query:   17 EDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLED---------------GTEVKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLL 200
            +DDL +PD KVILLGDSAVGKSKLVERYLM+++NPRQLSTFALTL+RK  +L +               G  V +D+WDTAGQERF+SMH SYY+RAHA +LVFDVTRK TY+NL+ WY ELR YCE+IP +L ANKID++Y VTKKSFKFA QH LPF+F SAADGTNVV+IFE A+K G+ +K+  GDF+++AL++L
Sbjct:    9 QDDLPDPDCKVILLGDSAVGKSKLVERYLMNDFNPRQLSTFALTLYRKEVQLPEDDGDGGKDDGAKGQGGRTVSIDIWDTAGQERFTSMHPSYYYRAHACILVFDVTRKVTYQNLSTWYSELRNYCENIPVILCANKIDINYEVTKKSFKFASQHQLPFFFASAADGTNVVQIFESAVKMGVHYKETEGDFIEDALSVL 207

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BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 267 bits (682), Expect = 3.240e-88
Identity = 136/198 (68.69%), Postives = 154/198 (77.78%), Query Frame = 0

Query:   10 DHMAERDEDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLEDGTE----VKVDLWDTAGQERFSSMHSSYYHRAHASVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSFKFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLLESS 203
            D   E  +DDL EPD+KVILLGDSAVGKSKLVER++MDE+ PRQLSTFALTLFRK   LED       VKVD WDTAGQERFSSMH SYY+ AHA +LVFDVTRK TY+NL  WY ELR+YCE+IPC LVANKIDVD  VT K FKFA+ H L F FVSAADGTNVVK+F++A+ A  +FK +GGDF+   L LL  S
Sbjct:    4 DAKRETPDDDLGEPDVKVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTNKKFKFAETHNLEFEFVSAADGTNVVKLFKQAVAAACKFKADGGDFMATVLDLLGES 201

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot

BLAST of mRNA_H-elongata_contig4770.11904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G647_ECTSI	1.450e-121	85.57	RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax...	[more]
A0A835ZG89_9STRA	3.630e-107	80.75	RTW, ras superfamily GTPase n=1 Tax=Tribonema minu...	[more]
A0A125SEA6_9STRA	8.590e-95	72.68	RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 R...	[more]
A0A8K1CGD5_PYTOL	9.420e-90	69.11	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A024TW89_9STRA	2.100e-89	67.89	Uncharacterized protein n=2 Tax=Aphanomyces TaxID=...	[more]
T0R548_SAPDV	2.700e-89	70.65	Rab family, other n=2 Tax=Saprolegniaceae TaxID=47...	[more]
A0A6G0WRD6_9STRA	2.870e-89	68.06	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A8J2WYL7_9STRA	3.190e-89	66.84	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S2XUJ5_9STRA	1.700e-88	64.82	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A2D4BD48_PYTIN	3.240e-88	68.69	Rab family, other n=1 Tax=Pythium insidiosum TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 160..182 score: 28.82 coord: 128..141 score: 41.08 coord: 67..89 score: 45.37 coord: 25..46 score: 42.71
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 27..185 e-value: 1.8E-12 score: 39.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 25..185 e-value: 3.6E-42 score: 156.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 22..185 e-value: 2.1E-10 score: 31.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 30..205 e-value: 2.6E-8 score: 43.6
None	No IPR available	GENE3D	3.40.50.300		coord: 12..194 e-value: 3.2E-52 score: 178.7
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 18..201
None	No IPR available	PANTHER	PTHR24073:SF263	RAB-LIKE PROTEIN 2A-RELATED	coord: 18..201
None	No IPR available	PROSITE	PS51419	RAB	coord: 16..207 score: 22.813
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 26..181 e-value: 2.6E-42 score: 144.2
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 24..176 e-value: 1.1E-24 score: 85.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 24..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig4770	contig	H-elongata_contig4770:1265..7560 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig4770.11904.1	mRNA_H-elongata_contig4770.11904.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig4770 1265..7560 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig4770.11904.1 ID=prot_H-elongata_contig4770.11904.1|Name=mRNA_H-elongata_contig4770.11904.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp
MCQRETEGKDHMAERDEDDLEEPDLKVILLGDSAVGKSKLVERYLMDEYN
PRQLSTFALTLFRKNARLEDGTEVKVDLWDTAGQERFSSMHSSYYHRAHA
SVLVFDVTRKATYKNLTEWYGELRQYCESIPCLLVANKIDVDYNVTKKSF
KFAQQHGLPFYFVSAADGTNVVKIFEEAIKAGLEFKKNGGDFVDEALTLL
ESSTINS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase