prot_H-elongata_contig47536.11883.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47536.11883.1
Unique Nameprot_H-elongata_contig47536.11883.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: D8LG62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG62_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.310e-70
Identity = 117/183 (63.93%), Postives = 140/183 (76.50%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEV-----NDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDWMSVSPADWVFQTGQVVPA 178
            ME +F+G R+V VSG  RTTAAE+ALFEGDEEGR+ ATLVLDCL+RCP+DCRRALVQNV+VAGGGA+LPGL +RL +EI ALA    +       ++ Y+WARAAV G+ GGLCVVRVPVRRDHL+WTGAS+M+ LG I  +RSL+ EQY     EG    LPDWMSVS ADW+F+ G    A
Sbjct:  194 MELMFAGQRRVVVSGATRTTAAEQALFEGDEEGRSLATLVLDCLKRCPRDCRRALVQNVLVAGGGAVLPGLPARLAQEIEALATAAAAPPPPLGSSEGYSWARAAVCGDPGGLCVVRVPVRRDHLVWTGASIMASLGGIA-DRSLTCEQYLARRGEGGGRLLPDWMSVSSADWLFEGGGAAAA 375          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A6H5JW34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW34_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 3.300e-59
Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEV---NDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVG 155
            ME +F+G R+V VSG  RTTAAE+ALFEGDEEGR+ ATLVLDCL+RCP+DCRRALVQNV+VAGGGALLPGL +RL +EI ALA    ++    ++ Y+WARAAV G+ GGLCVVRVPVRRD+L+WTGAS+M+ LG I  +RSL+ EQY     EG  G
Sbjct:  224 MELMFAGHRRVVVSGATRTTAAEQALFEGDEEGRSLATLVLDCLKRCPRDCRRALVQNVLVAGGGALLPGLPARLAQEIEALATAAAAQPLGSSEGYSWARAAVCGDPGGLCVVRVPVRRDNLVWTGASIMASLGGIA-DRSLTCEQYLARRGEGGGG 380          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A7S3XWM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWM0_HETAK)

HSP 1 Score: 99.4 bits (246), Expect = 1.670e-22
Identity = 58/168 (34.52%), Postives = 88/168 (52.38%), Query Frame = 0
Query:    6 SGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEG-GGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDWMSVSPADWVFQT 172
            +G R + +SG  R  AA+  LF G EE  +    + + L++C  + R+ L+ N+VV GG A++ G C RL EEIR      E  +   +   R A        LC+ +V ++R  L W GAS+++ L ++V       E   N E      QLPDW+S+SP DW+F +
Sbjct:   62 TGGRYIQISGDARIGAAD-VLFTGTEEADSIVLAIFESLKKCCPELRKGLLSNIVVTGGVAMMEGFCGRLAEEIRCFFD--EDGIVPVHEQKRFADIKPAISSLCITQVFLQRHSLTWAGASILASLQELVDVTMTPQEYIKNQE------QLPDWLSISPIDWLFHS 220          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A6P8GQH7_CLUHA (actin-related protein 10 isoform X1 n=8 Tax=Clupeocephala TaxID=186625 RepID=A0A6P8GQH7_CLUHA)

HSP 1 Score: 97.1 bits (240), Expect = 1.930e-20
Identity = 60/181 (33.15%), Postives = 93/181 (51.38%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDWMSVS--PADWVFQTGQVVPAM 179
            +++   G + + + G +R +  E  LFE D E ++ ATL+LDCL +CP D R+AL +N+VV GG A+LPG   RL  EIR L          +Y  A A          +   P + +   W G ++   L DI+G RS+S + Y       + G++PDW  +S  P + V+ T +  P +
Sbjct:  246 VDYPLDGEKILHIKGSIRDSVME-MLFEQDNEEKSVATLILDCLVKCPIDTRKALSENIVVIGGTAMLPGFLHRLLAEIRLLVE------KPKYQQALATK-----SFKLHSPPAKPNCTAWLGGAIFGALQDILGSRSVSRDYYT------QTGRIPDWCCLSSPPPESVYDTSKAPPPL 408          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: S4RMQ9_PETMA (Actin related protein 10 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RMQ9_PETMA)

HSP 1 Score: 94.4 bits (233), Expect = 1.790e-19
Identity = 58/181 (32.04%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDWMSVS--PADWVFQTGQVVPAM 179
            + +   G   + V G +R +  E  LF  D E ++ ATL+LDCL +CP D R  L +N+VV GG A LPG   RL  EI+ L +        +Y    +        +CV   P + +++ W G ++   L +++G RS+S E Y      G+ G++PDW S+   P D + +    VP +
Sbjct:  244 VSYPLDGENILIVKGEIRDSLCE-ILFVQDNEEKSVATLMLDCLVKCPMDLRTTLAKNLVVMGGTAQLPGFTHRLLAEIKQLLQ------QPKYQAVLSVT-----SVCVHTPPAKPNYVAWLGGAIFGALQEVLGSRSVSRELY------GQTGKIPDWCSLGNPPPDSLLEPKTPVPML 406          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A7M5X2I6_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X2I6_9CNID)

HSP 1 Score: 89.0 bits (219), Expect = 1.870e-17
Identity = 55/165 (33.33%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQY--DNFEREGRVGQLPDWMSV 163
            +++   G   + V G +R  AA+  LFEGDEEG++ ATL+LD + +CP DCR+ L +N+V+ GG  ++PG  SRL  E++ L +      +D+Y+    ++F +   L + + PV  ++  W G +++  L +I+ E S+  ++Y  D F        +PDW +V
Sbjct:  235 VKYPLEGGITLNVDGKIRAHAAD-TLFEGDEEGKSIATLILDSILKCPIDCRKMLAENIVLVGGSVMMPGFESRLMAELKYLLK------SDQYS---QSLFLK--KLAMKKPPVPANYCSWQGGALLGAL-EILPELSIGRDRYKADPF--------IPDWSTV 378          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: UPI001C719166 (actin-related protein 10 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C719166)

HSP 1 Score: 79.3 bits (194), Expect = 4.030e-14
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDW 160
            +++  S  + +TV G +R  AAE  LFE D++ ++ ATL+LDCL RCP D R+ L  NV++ GG ++LPG    L  E++ L         D+  ++      E   + +   P + +++ W GAS      + V  RS++ +QY    R+ +   +PDW
Sbjct:  250 VKYPLSSDKMMTVPGTLREWAAE-LLFEPDDDDKSIATLILDCLLRCPIDTRKELANNVIIMGGTSMLPGFKHSLLTEVKMLF--------DDPKYSSRLPLKE---IKLHTPPAKENYVAWLGASAFGAT-EAVPSRSITKDQY----RQNKY--IPDW 390          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A7E5W4U8_TRINI (actin-related protein 10 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5W4U8_TRINI)

HSP 1 Score: 73.9 bits (180), Expect = 3.000e-12
Identity = 59/151 (39.07%), Postives = 72/151 (47.68%), Query Frame = 0
Query:   11 VTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDWM 161
            VTV+G  R  AAE  LF  D E  +    VL  L RCP+D RRAL  NVV+AGGGA LPGL +RL  E+R L   R      E        F E         P   + L W G +V+    D    R+L+ EQY       R  +L DW+
Sbjct:  234 VTVTGRARELAAEP-LFARDHELASLPDAVLQSLARCPRDARRALAANVVLAGGGAALPGLRARLAAELRRL---RAQPPYAERLHVDEFRFHE--------PPGHGNALAWLGGAVLGA-SDAGAARALAREQY------AREPRLRDWV 365          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A8J2W980_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2W980_9CRUS)

HSP 1 Score: 73.9 bits (180), Expect = 3.110e-12
Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 0
Query:    6 SGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFEREGRVGQLPDWMSVS 164
            SG+  +T+ G VR  +AE  LFE D E  + A+++LD +   P D R  L +N+VV GGG+++PGL +RL EE++ L      +++ +YA +R A+      L V R P + ++  W G +++    + +  RS + E Y       +   +PDW +++
Sbjct:  244 SGNNNLTLDGSVREESAE-VLFETDNEMVSLASMILDSILASPIDFRIPLAENLVVIGGGSMMPGLKARLMEEVKDL------QLHPKYA-SRIAL----KVLKVHRPPAKSNYAAWLGGAILGAT-EAIATRSYTREIYM------QTNHVPDWNNLA 383          
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Match: A0A3M6T4G3_POCDA (Uncharacterized protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6T4G3_POCDA)

HSP 1 Score: 72.8 bits (177), Expect = 9.080e-12
Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = 0
Query:    1 MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQDCRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAAVFGEGGGLCVVRVPVRRDHLLWTGASVMSC--LG--DIVGERSLSLEQYDNFEREGRVGQLPDWMS 162
            +++   G R + + G +R    +  LF+GDEEG++ AT +LD + +CP D R+ L +N+V+ GG  + PG   RL +EI  L +    + N      +           + ++PV  +   W G   + C   G  +++ +RS++ E+Y+      +  ++PDW S
Sbjct:  234 VDYPLDGGRIIRIEGQIREQTFD-ILFDGDEEGKSIATCLLDSILKCPIDTRKQLAENIVLVGGTVMTPGFKHRLLQEIYCLLQSPRYKENLFMKTIK-----------MHQIPVTANCTSWLGGRPVFCAIFGALEVLADRSVTKERYN------QDNKIPDWAS 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47536.11883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG62_ECTSI1.310e-7063.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW34_9PHAE3.300e-5965.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XWM0_HETAK1.670e-2234.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6P8GQH7_CLUHA1.930e-2033.15actin-related protein 10 isoform X1 n=8 Tax=Clupeo... [more]
S4RMQ9_PETMA1.790e-1932.04Actin related protein 10 n=2 Tax=Petromyzon marinu... [more]
A0A7M5X2I6_9CNID1.870e-1733.33Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
UPI001C7191664.030e-1431.88actin-related protein 10 n=1 Tax=Parasteatoda tepi... [more]
A0A7E5W4U8_TRINI3.000e-1239.07actin-related protein 10 n=1 Tax=Trichoplusia ni T... [more]
A0A8J2W980_9CRUS3.110e-1232.08Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A3M6T4G3_POCDA9.080e-1227.71Uncharacterized protein n=3 Tax=Pocilloporidae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPFAMPF00022Actincoord: 34..145
e-value: 2.1E-12
score: 46.4
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 20..156
NoneNo IPR availableGENE3D3.30.420.40coord: 3..128
e-value: 3.9E-18
score: 67.5
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 23..147
IPR027127Actin-related protein 10PANTHERPTHR11937:SF14ACTIN-RELATED PROTEIN 10coord: 20..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47536contigH-elongata_contig47536:27..3789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47536.11883.1mRNA_H-elongata_contig47536.11883.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47536 9..3789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47536.11883.1 ID=prot_H-elongata_contig47536.11883.1|Name=mRNA_H-elongata_contig47536.11883.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MEFIFSGSRKVTVSGVVRTTAAEEALFEGDEEGRTPATLVLDCLRRCPQD
CRRALVQNVVVAGGGALLPGLCSRLGEEIRALARGRESEVNDEYAWARAA
VFGEGGGLCVVRVPVRRDHLLWTGASVMSCLGDIVGERSLSLEQYDNFER
EGRVGQLPDWMSVSPADWVFQTGQVVPAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR027127Arp10