prot_H-elongata_contig47505.11878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig47505.11878.1
Unique Name	prot_H-elongata_contig47505.11878.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	142

Homology

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 6.010e-37
Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 0

Query:    7 FHEGVLLLIDAGANVDSRLRTGATPMYIAAENGKLEAARVL-RAKTNLMLSVQSNNPLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLL 140
            F +G++ LIDAGANVDSR+  G+T MYIAA  G L+A ++L + + N ML V   +PL +  + GH  VV+ELVQ FG+DGCS +G   AL+ A+++N+  I  F  D GV DTDG+ALC A+EG  EAC+KLL+
Sbjct:  126 FCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLV 260

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 7.120e-36
Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 0

Query:    7 FHEGVLLLIDAGANVDSRLRTGATPMYIAAENGKLEAARVL-RAKTNLMLSVQSNNPLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLLT 141
            F EG++ LI+AGANVDSR+  G+T MYIAA  G LEA  +L + K N +L V   +PL +  + GH  VV+ELVQ FGIDGC+ +G   AL+ A+++N+  I  F  D GV DTDG+ALC A+EG  EAC+KLL++
Sbjct:  139 FCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVS 274

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 4.200e-30
Identity = 73/144 (50.69%), Postives = 90/144 (62.50%), Query Frame = 0

Query:    2 GAEIDFH--EGVLLLIDAGANVDSRLRTGATPMYIAAENGKLEAARVL-RAKTNLMLSVQSNN--PLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLL 140
            GAE++    +G+++LI AGANVDS   +GATP+Y +A  G+LE  +VL   K N ++        PL   A  G+  VVRELVQ FGIDGCS DGG  AL  A+ QN  DI  F  D GV D +G ALC+AVEG  E  VKLLL
Sbjct:   87 GAEVEARCVDGMVVLIHAGANVDSEQESGATPLYTSARQGRLEDVKVLVGTKANPLVPAYDGESLPLDAAAENGYLGVVRELVQRFGIDGCSRDGGAQALVEAASQNQTDIVTFLFDNGVVDAEGIALCAAVEGRREEFVKLLL 230

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 6.060e-23
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0

Query:   47 LRAKTNLMLSVQSNNPLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLL 140
            LRA  N +LS   + PL    Y GH  VV ELV W+G D C++DGG  AL  A+ + +VDI  F CD GV DT+G ALC+A+EG  EACV LLL
Sbjct:  148 LRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLL 241

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 6.930e-22
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 0

Query:   49 AKTNLMLSVQSNNPLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLL 140
            A  N +LS   + PL +  Y GH  VVRELV W+G D C+ DGG  AL  A+ + +VDI AF C+ GV DT+G ALC+A+EG  EACV LLL
Sbjct:  571 ANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLL 662

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 7.150e-22
Identity = 64/144 (44.44%), Postives = 81/144 (56.25%), Query Frame = 0

Query:   14 LIDAGANVDSR------LRTGATPMYIAAENGKLEAARVL---------RAKTNLMLSVQSNN--PLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLL 140
            L+ AGA++++R      L  G TP+++AA  G  +   +L          AK N +L+       PL V A  G   VVREL Q FGIDGCS DGG  AL  A+ QN VDI  F  D GV D +G ALC+AVEG  E C++LLL
Sbjct:   83 LVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLL 226

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 5.320e-12
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 0

Query:   14 LIDAGANVDSRLRTGATPMYIAAENGKLEAARVLR-AKTNLML------SVQSNNPLTVVAYTGHTAVVRELVQWFGIDGCS-HDGGQNALKLASFQNYVDIAAFPCDVGVADT 119
            L++AGAN++SR   GATP+++AA  G ++A R+L  AK + +L      S +++ PL V A  GH  VV EL++  GI GC    GG  AL+ A+   ++D+     + GV DT
Sbjct:   36 LLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT 149

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 9.270e-7
Identity = 33/71 (46.48%), Postives = 41/71 (57.75%), Query Frame = 0

Query:   62 PLTVVAYTGHTAVVRELVQWFGIDGCS-HDGGQNALKLASFQNYVDIAAFPCDVGVADTDGSALCSAVEGS 131
            PL V A +GH+ VVR LVQ  GI GC+  + G+ AL LA+ +  +D  A     G  DT GSAL  A E S
Sbjct:  172 PLDVAASSGHSGVVRHLVQELGIKGCNPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAAEAS 242

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: A0A6H5KJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ94_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 4.300e-6
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0

Query:    9 EGVLLLIDAGANVDSRLRTGATPMYIAAENGKLEAARVL-RAKTNLMLSVQSNNPLTVVAYT----GHTAVVRELVQWFGIDGC 87
            + +L LI+AGANV+SR+  GAT M IA+  G  +A  VL RAK +  L   ++  L V + T    G +  VREL++  GI+GC
Sbjct:   42 KAMLALIEAGANVNSRMLDGATLMLIASTQGYKDAIPVLLRAKADPQLQHNTSGNLVVPSDTSAIRGDSDAVRELIRHVGIEGC 125

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BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Match: D8LB36_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB36_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.570e-5
Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 0

Query:   31 PMYIAAENGKLEAARVL-RAKTNLMLSVQSNN----PLTVVAYTGHTAVVRELVQWFGIDGCSHDG-GQNALKLASFQNYVDIAAFPC-DVGVADTDGSALCSAVEGSGEACVKLLL 140
            P+ IA+  G  +A++VL RAK +  L   ++     PL ++A  G +  VREL +   IDGC     G NAL  A+   +VDI      D GV DT G AL +A    G   V+ LL
Sbjct:   79 PLLIASTQGYKDASKVLLRAKVDPQLQQNTSGNLFVPLNMLATRGDSDAVRELFRHVDIDGCGGPSRGVNALVTAARDKHVDIMVLLLTDAGVVDT-GGALITAAHYGGVVSVEHLL 194

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot

BLAST of mRNA_H-elongata_contig47505.11878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D8LP44_ECTSI	6.010e-37	51.85	EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5KSL5_9PHAE	7.120e-36	52.21	Uncharacterized protein n=2 Tax=root TaxID=1 RepID...	[more]
A0A6H5K1W5_9PHAE	4.200e-30	50.69	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JHQ8_9PHAE	6.060e-23	53.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JL58_9PHAE	6.930e-22	53.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JNS0_9PHAE	7.150e-22	44.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FXY7_ECTSI	5.320e-12	39.47	EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
D7FVU0_ECTSI	9.270e-7	46.48	EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A6H5KJ94_9PHAE	4.300e-6	42.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LB36_ECTSI	3.570e-5	37.61	EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 53..141 e-value: 1.2E-6 score: 30.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 6..140
None	No IPR available	GENE3D	1.25.40.960		coord: 4..52 e-value: 3.7E-8 score: 35.3
None	No IPR available	PANTHER	PTHR23206:SF4	ANKYRIN REPEAT AND KH DOMAIN-CONTAINING 1	coord: 11..79
None	No IPR available	PANTHER	PTHR23206	MASK PROTEIN	coord: 11..79
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 11..83 e-value: 1.4E-7 score: 32.0
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..47 score: 11.559

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig47505	contig	H-elongata_contig47505:3712..4137 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig47505.11878.1	mRNA_H-elongata_contig47505.11878.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig47505 3385..4281 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig47505.11878.1 ID=prot_H-elongata_contig47505.11878.1|Name=mRNA_H-elongata_contig47505.11878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
MGAEIDFHEGVLLLIDAGANVDSRLRTGATPMYIAAENGKLEAARVLRAK
TNLMLSVQSNNPLTVVAYTGHTAVVRELVQWFGIDGCSHDGGQNALKLAS
FQNYVDIAAFPCDVGVADTDGSALCSAVEGSGEACVKLLLT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom