prot_H-elongata_contig47505.11877.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47505.11877.1
Unique Nameprot_H-elongata_contig47505.11877.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.040e-36
Identity = 75/141 (53.19%), Postives = 96/141 (68.09%), Query Frame = 0
Query:    4 EASNLQGDLRRAGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            +A  L+  LR   I G VRV   S R S ID I+++C G ++ +AA ML RVL RD R PSI S + +I  + G G K+PVTD  TLVE+IWMLP  +SR FRRKS++TICRV+G DL+LCR+IE+    W  +EGGEA Q
Sbjct:  125 KAVALRKALRAMNIQGSVRVDERSGRVSGIDVIKMLCTGASSEYAAQMLKRVLERDDREPSIKSRVSYIK-IDGSGNKSPVTDFNTLVEIIWMLPTGSSREFRRKSAETICRVMGGDLSLCRQIEQNALGWNCVEGGEAIQ 264          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.230e-35
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 0
Query:    8 LQGDLRRAGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            L+  LR   I G VRV   +   S ID I+++CP  N ++A + LAR++ RD R PSI S + +I  + G G K+PVTD  TLVE+IWMLP  ASR FRRKS++TICRV+G DL+LCR+IE+    W  ++GGEA Q
Sbjct:  563 LRKALRAMNIEGSVRVDERTGMVSGIDVIKMLCPEKNDDYAKIALARIIARDDREPSIKSRVSYIK-INGSGHKSPVTDFNTLVEIIWMLPAGASREFRRKSAETICRVMGGDLSLCRQIEQNALGWNCVDGGEAIQ 698          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K)

HSP 1 Score: 119 bits (299), Expect = 5.630e-29
Identity = 64/153 (41.83%), Postives = 95/153 (62.09%), Query Frame = 0
Query:    3 VEASNLQGDLRRAGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVL-----------VRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            ++ + LQ  LR   I G VR+ +   +AS IDT RLVCPG ++ +AA M  RVL           ++DA+ P+  +     + + G G  TPV+D KT+VE+IW+LP  A++ FRR+S++TICRV+G D++LC EIE++ +   S E G A Q
Sbjct:  128 IKTAVLQNALRSININGSVRIDDGLGKASIIDTTRLVCPGASSAYAAQMFTRVLEKERDDGGNSFMQDAQHPTPIADRVDYIRINGHGNVTPVSDAKTIVEIIWLLPSGAAKEFRRQSAETICRVLGGDISLCGEIEQRCARLRSTEEGRAYQ 280          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A835YYW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.550e-26
Identity = 55/124 (44.35%), Postives = 82/124 (66.13%), Query Frame = 0
Query:   21 VRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            +RV +AS + S ID IRLV P + +N A+   AR+    + +P + S   H+  + G+G+ TP  D KTLVE++W LPG A+R FRR+S++T+CR++G DL+L +EIE ++ A    EGG A Q
Sbjct:   10 IRVDSASNKGSVIDVIRLVIPNLPSNQASTTFARLA---SEMPDVASSCCHL-RINGKGKPTPCADAKTLVEIVWSLPGKAARDFRRESANTVCRLLGGDLSLVQEIESRHHALQKTEGGHAVQ 129          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.550e-25
Identity = 60/148 (40.54%), Postives = 88/148 (59.46%), Query Frame = 0
Query:    8 LQGDLRRAGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVL-----------VRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            LQ  LR   I G VR+ +   + S IDT RLVC G  + +AA M  RVL           +R  + P+  +     + + G G+ TPV+D KT+VE+IW+LP  +++ FRR+S++TICRV+G D++LC EIE++ +   S E G A Q
Sbjct:  133 LQKALRSININGSVRIDDGCGKESIIDTTRLVCRGAYSAYAAQMFTRVLEEERNDGGSSFMRGEQTPTPIADRVDYIRINGHGKVTPVSDSKTIVEIIWLLPSGSAKEFRRQSAETICRVLGGDISLCGEIEQRCARLQSTEEGRAYQ 280          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A835YNN1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.500e-24
Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   17 IIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            I   +RV  A+ + S ID IRLV P + + HA+    R+      +P I +    ++ + G+G+ +PV D KTLVE+++ LPG A+R FRR S+ T+CRV+G DL++ +EIE+++      EGG A Q
Sbjct:    6 ITATIRVDAATNKGSVIDVIRLVHPDIESKHASTYFTRL---TTEIPEIATQC-GLLRINGKGKPSPVADAKTLVEIVFSLPGKAAREFRRTSAKTVCRVLGGDLSIVQEIEQRHHTLQQTEGGRAAQ 129          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A835YZ27_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ27_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.440e-23
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   15 AGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            + I   +RV  A+ + S ID IRLV P   + +AA +LA  L +D     +     H+  +  +G+ TP  D KTLVE++W LPG A+R FRR S+ T+CRV+G DL++ +EIE+++      EGG A Q
Sbjct:    4 SNITAAIRVDTATNQGSVIDVIRLVNPNPTSGNAANVLAN-LTKD-----VTLNYSHL-RINAKGKPTPCADAKTLVEIVWSLPGKAAREFRRTSAKTVCRVLGGDLSIVQEIEKRHHTLQQTEGGRAAQ 126          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A835YUW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.590e-19
Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0
Query:   17 IIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            I   +RV  A+   S +D I +V PG    + +L L+R++     VP +      +  + G+G  TPV D KTL+E++W+LPG A+R FRR S+ T+CRV+G DL+L  EIE  + A    + G+A Q
Sbjct:    6 ITATIRVDTATQLGSVMDVIAMVDPG----NPSLSLSRLI---KGVPDLIEKCKKLK-INGKGNVTPVADAKTLIEIVWLLPGKAAREFRRTSAKTVCRVLGGDLSLAEEIEAHHHAQQGSDEGQAAQ 125          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A835Z1W0_9STRA (Uncharacterized protein n=8 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.380e-19
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   15 AGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            A I   +R+  AS   S +D IRLV P + +N A+    R+ +    +P + S    +  + G G+ TP  D +TLVE++W LPG  +RAFRR S+ T+CRV+G D++L  EIE +  A  + E G A Q
Sbjct:    4 ADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLALE---LPDVASSCRQL-RINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVNEIEGRCRALQATEVGRAAQ 129          
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.780e-18
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   21 VRVGNASLRASTIDTIRLVCPGVNTNHAALMLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGTASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ 144
            +RV       S IDTIR+V  G +++ A   L R+++ +  + +  + L     + G+G+ TPV D KTL+E++W+LPG  +R FRR+SS+ +CR++G DL+L  EIE +++   S E G ATQ
Sbjct:  909 IRVDKNEQVGSVIDTIRMVLGG-DSSAANTSLNRLILANEELGTRCTQLR----INGKGKFTPVADAKTLIEIVWLLPGKKAREFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRATQ 1027          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47505.11877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJP2_9PHAE3.040e-3653.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5N7_9PHAE3.230e-3551.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN79_ESV1K5.630e-2941.83EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K[more]
A0A835YYW8_9STRA4.550e-2644.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K200_9PHAE3.550e-2540.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNN1_9STRA2.500e-2439.84Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YZ27_9STRA3.440e-2340.77Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YUW0_9STRA2.590e-1939.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z1W0_9STRA3.380e-1939.23Uncharacterized protein n=8 Tax=Tribonema minus Ta... [more]
A0A6H5JW74_9PHAE1.780e-1839.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47505contigH-elongata_contig47505:443..1155 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47505.11877.1mRNA_H-elongata_contig47505.11877.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47505 443..1155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47505.11877.1 ID=prot_H-elongata_contig47505.11877.1|Name=mRNA_H-elongata_contig47505.11877.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
MVVEASNLQGDLRRAGIIGDVRVGNASLRASTIDTIRLVCPGVNTNHAAL
MLARVLVRDARVPSINSPLPHIVGLLGRGQKTPVTDLKTLVEVIWMLPGT
ASRAFRRKSSDTICRVIGSDLNLCREIERKNSAWMSIEGGEATQ
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