prot_H-elongata_contig47472.11871.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47472.11871.1
Unique Nameprot_H-elongata_contig47472.11871.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 1.200e-86
Identity = 136/172 (79.07%), Postives = 156/172 (90.70%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGM 172
            + N TF+K+LKEGLR+HTGTAAFGSLIIAIIK IRA+LTY+QK+LQ SG+K AQA+LCCL CFFWCLEKCVKFI+KNAY+QVAIFSTSFC S+KNAFWLIARNL RVG VTVVTDFV  IMKLVI LG AGA Y+FLQNFM++D+YSP+GPV FAGVMAY+VA +FA+LLGM
Sbjct:  414 VNNGTFWKSLKEGLRFHTGTAAFGSLIIAIIKTIRAMLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVKFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLVIGLGTAGATYVFLQNFMKDDLYSPMGPVFFAGVMAYYVASSFAALLGM 585          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 4.330e-62
Identity = 109/154 (70.78%), Postives = 124/154 (80.52%), Query Frame = 0
Query:   34 IRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKL---------------VISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGM 172
            IRAVLTY+QK+LQ SG+K AQA+LCCL CFFWCLEKCV+FI+KNAY+QVAIFSTSFC S+KNAFWLIARNL RVG VTVVTDFV  IMKL               VI LG AG  Y+FLQ FM+ED+YSP+GPV FAGVMAY+VA +FA+LLGM
Sbjct:  488 IRAVLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVRFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLLCITPTCIFRVKLTQVIGLGTAGVTYVFLQKFMKEDLYSPMGPVFFAGVMAYYVASSFAALLGM 641          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 205 bits (522), Expect = 9.250e-60
Identity = 101/172 (58.72%), Postives = 134/172 (77.91%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGM 172
            +G+ TFFKA+K+G+ YH GTAAFGSLIIAII+MIRA++ + QK+ +ASGNK+AQ  LCC QC FWCL+KC++FI+KNAY+Q A+FST FC+S K AF+LIARN+ RVG V++V++F+ +IMKLVI L    A YL L   +  +++S VGP +F GV+AY VA  FA L  M
Sbjct:  405 LGSGTFFKAMKDGMWYHMGTAAFGSLIIAIIQMIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMIIIMKLVICLATMAATYLGLDATIGNELHSFVGPTIFVGVLAYLVASVFAELFSM 576          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: W7TBK4_9STRA (Choline transporter-like protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBK4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 7.920e-47
Identity = 89/174 (51.15%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEED-IYSPVGPVLFAGVMAYFVADAFASLLGMA 173
            IG+ T  KA+     YH GTAAFGSL+IA+++ IR+++ YIQK L+ S NKVAQ +LCC QC FWCLEK +KF++KNAY+Q A+  TSFC S K AF+LIARN+ R+G V++V++FV +I K+ +S+  AGA+  +   F  ED I+SP+GP +   ++A+F AD F  +  MA
Sbjct:  446 IGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSV-TAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMA 618          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.240e-46
Identity = 82/173 (47.40%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGMA 173
            +G+ T   ++ +   +H GTAAFG LI+AI++MIRA+LTYIQK+ + SGNKV Q I CC  C FWCLE C++FI+KNAYVQ AIFST+FC SA+NAF+LIARN++RV  VT++ +FV  +M + + +     +Y+ + + +   + S VGP +   V+AY+       + GMA
Sbjct:  384 VGSLTVVSSVGKTFAFHIGTAAFGGLIVAIVEMIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVTILGEFVLNVMTVFVCIVTTLGVYVAMDSNIRSQLNSLVGPTIMTAVLAYYTGKMVTGVYGMA 556          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A7S2V489_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V489_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.510e-45
Identity = 83/173 (47.98%), Postives = 122/173 (70.52%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGMA 173
            IG+ T FK++K  + YH+GT AFGSLIIAIIK IRAV++YIQK+   SGNK+A A+LCC+Q     +EKC+KF++KNAY+Q AI+  SFC++A+ AF+LIARN+ R+  V +V ++V  I K+VI+L      +L + + M + ++    P +F  ++AYFV+  F  + GMA
Sbjct:  166 IGSSTVFKSIKMSMWYHSGTCAFGSLIIAIIKTIRAVVSYIQKKAAKSGNKIAVALLCCIQXXXXXIEKCMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRITAVALVGNYVLFIGKMVITLLATFLAFLVMDSTMSDKLHGLYAPTIFTFILAYFVSLMFVEVFGMA 338          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A1Z5JIP5_FISSO (Choline transporter-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIP5_FISSO)

HSP 1 Score: 162 bits (409), Expect = 2.240e-43
Identity = 78/173 (45.09%), Postives = 122/173 (70.52%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGMA 173
            +G++T   +++E + YH GT A+GSL++AI++ IR ++  +QK+ + + NK+A+ ILCC QC FWCLE+C+KFI+KNAY+Q AIFSTSFC+S + +F+LI RN +RVG VT V+  V +I KL IS    G  Y+ +   + ++++S  GPV    ++AY+++D F  +  MA
Sbjct:  470 VGSWTVISSVRETVTYHLGTCAYGSLLVAIVQFIRYIIAKLQKKAKETQNKIAEYILCCCQCCFWCLERCLKFINKNAYIQTAIFSTSFCKSCRASFFLIFRNAARVGAVTYVSSAVLIIGKLFISAVTTGFAYIAITERLSDELFSVGGPVTITFLIAYWMSDFFMGVFDMA 642          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A6V2WBV2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WBV2_HETAK)

HSP 1 Score: 161 bits (407), Expect = 2.410e-43
Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 0
Query:    8 KALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGM 172
            K++   L YHTGTAAFGSLIIAII+++RA L Y+QK+ +A+ NK A A+LC LQC  WC EKC+KF++KNAY+  A+FS  FC +AK AF LIARN++RV  V++V+ F+ +I +L ++LG A   Y  L+ +M + + S + P      +AY V+  F   L M
Sbjct:  406 KSMVATLWYHTGTAAFGSLIIAIIQLVRAFLAYVQKKTKAANNKFADALLCVLQCCLWCFEKCMKFLNKNAYIHTALFSDKFCHAAKEAFLLIARNIARVAAVSLVSQFIMIIAELFMTLGAATLCYFLLEIYMADQLTSLLYPTAMTAALAYCVSKIFVETLSM 570          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.910e-43
Identity = 85/173 (49.13%), Postives = 123/173 (71.10%), Query Frame = 0
Query:    1 IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGMA 173
            IGN T FKA++  + YH+GT AFGSLIIAIIK IRAV++Y+QK+   SGNK+AQA+LCC+Q         +KF++KNAY+Q AI+  SFC++A+ AF+LIARN+ RV  V +V +++  I KLVI++      +L L + ME++++   GP++F  ++AYFVA  F  + GMA
Sbjct:  400 IGNLTVFKAIRVSMWYHSGTCAFGSLIIAIIKTIRAVISYLQKKAAQSGNKLAQAVLCCIQXXXXXXXXXMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRVVAVALVGNYILFIGKLVITVVTTFLAFLVLDS-MEDELHGLYGPIIFTFLLAYFVALMFVEVFGMA 571          
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Match: A0A7R9YAE8_9STRA (Choline transporter-like protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAE8_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.170e-43
Identity = 84/168 (50.00%), Postives = 120/168 (71.43%), Query Frame = 0
Query:    7 FKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGNKVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLIARNLSRVGTVTVVTDFVSLIMKL-VISLGVAGALYLFLQNFMEEDIYSPVGPVLFAGVMAYFVADAFASLLGMA 173
            F+++   LR+HTGTAAFG+LI+AI+++IRAV+TY+QK+ + SGNKVA+ ILC  QC FWC EKCVKF+S+NAY+Q AIF   FC  AK+AF+LI RN  RVG +T V  FV  I K+ ++S+  AG+ +L ++    ++I     PVLF  +++Y+ AD F  +  +A
Sbjct:  509 FRSVGLVLRFHTGTAAFGALILAIVQIIRAVITYMQKKAKESGNKVAEYILCLCQCCFWCFEKCVKFLSQNAYIQTAIFGKGFCSGAKDAFFLILRNFLRVGALTAVGGFVMSIGKIFIVSIATAGSFFL-IEEIYGDEINGLFLPVLFVFILSYYTADMFLDIYEIA 675          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47472.11871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ7_ECTSI1.200e-8679.07Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L007_9PHAE4.330e-6270.78Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA9.250e-6058.72Choline transporter-like protein n=1 Tax=Tribonema... [more]
W7TBK4_9STRA7.920e-4751.15Choline transporter-like protein n=6 Tax=Monodopsi... [more]
A0A6H5JW76_9PHAE3.240e-4647.40Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S2V489_9STRA4.510e-4547.98Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A1Z5JIP5_FISSO2.240e-4345.09Choline transporter-like protein n=2 Tax=Fistulife... [more]
A0A6V2WBV2_HETAK2.410e-4348.48Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S2Y2B5_9STRA3.910e-4349.13Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A7R9YAE8_9STRA4.170e-4350.00Choline transporter-like protein n=1 Tax=Pinguioco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 5..173
e-value: 1.0E-52
score: 179.4
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 4..173
NoneNo IPR availablePANTHERPTHR12385:SF14CTL-LIKE PROTEIN 2coord: 4..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47472contigH-elongata_contig47472:591..2302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47472.11871.1mRNA_H-elongata_contig47472.11871.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47472 591..2303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47472.11871.1 ID=prot_H-elongata_contig47472.11871.1|Name=mRNA_H-elongata_contig47472.11871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
IGNFTFFKALKEGLRYHTGTAAFGSLIIAIIKMIRAVLTYIQKQLQASGN
KVAQAILCCLQCFFWCLEKCVKFISKNAYVQVAIFSTSFCESAKNAFWLI
ARNLSRVGTVTVVTDFVSLIMKLVISLGVAGALYLFLQNFMEEDIYSPVG
PVLFAGVMAYFVADAFASLLGMA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like