prot_H-elongata_contig4747.11870.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4747.11870.1
Unique Nameprot_H-elongata_contig4747.11870.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length434
Homology
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: D8LAV3_ECTSI (Methylase-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV3_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 1.500e-108
Identity = 179/269 (66.54%), Postives = 209/269 (77.70%), Query Frame = 0
Query:  166 ARDAARAAQAALQRQDSAAAELGLSAKDGLGTASVATSDVSKTGATHGGVRVDAPDDEGEEDLMG-KEPDSARTTRNSPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYKL 433
            A+DA    QAAL R+DSA  ELG  + +      VA      T    G V      D GEE   G KEP+SAR +RN+PAASHSH++HLLWRQVAGPGDTV+DCTAGNGHD+LELAKIVAL DGVG LY MDVQ+RA+EAT  RL SELG +A KRSTL+ GNF ++PAEL   SVQL+VYNLGWLPGGDKSITT LEDTLESI++AKR+VK GGMIS+MLY+GH EGKRETEAV +YAAGL H++WRVF+H+R+NR  SP LLTI+KL
Sbjct:  191 AQDAIGMVQAALDRRDSATVELGAESSEDT---PVAAETAVLTSRGDGSVS-----DGGEEGGDGTKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYVMDVQERAIEATRERLRSELGELALKRSTLINGNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTKLEDTLESIEAAKRVVKHGGMISVMLYRGHAEGKRETEAVRDYAAGLAHSQWRVFMHERINRADSPELLTIFKL 451          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A6H5JPN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN0_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 1.010e-104
Identity = 172/268 (64.18%), Postives = 204/268 (76.12%), Query Frame = 0
Query:  166 ARDAARAAQAALQRQDSAAAELGLSAKDGLGTASVATSDVSKTGATHGGVRVDAPDDEGEEDLMGKEPDSARTTRNSPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYKL 433
            A+DA    QAAL R+DSAA ELG  + +    A+ A    S+ G   G                 KEP+SAR +RN+PAASHSH++HLLWRQVAGPGDTV+DCTAGNGHD+LELAKIVAL DGVG LY MD  +RA+EAT  RL SELG +A KRSTL+  NF ++PAEL   SVQL+VYNLGWLPGGDKSITT LEDTLESI++AKR+VK GGMIS+MLY+GH EGKRETEAV +YAA L H++WRVF+H+R+NR GSP LLTI+KL
Sbjct:  205 AQDAIGMVQAALDRRDSAAVELGAKSSEDTQVAAEAAVLTSRGGEESGDGT--------------KEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYIMD--ERAIEATRERLRSELGELALKRSTLINSNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTTLEDTLESIEAAKRVVKHGGMISVMLYRGHAEGKRETEAVRDYAASLAHSQWRVFMHERINRAGSPELLTIFKL 456          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A0G4GWR6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWR6_VITBC)

HSP 1 Score: 169 bits (427), Expect = 1.180e-46
Identity = 87/197 (44.16%), Postives = 127/197 (64.47%), Query Frame = 0
Query:  241 NSPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDG----VGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYKL 433
            +SP ASH  LS LLW+Q   PG   VD T GNG D+L L+ ++  +DG      +L  +DVQ  A+ +T + L  EL     +R  L   +  + P  +   SV +IVYNLG+LPGGDKS+TT  + T+ S+ +A +L+  GG+IS+MLY+GHPEG  E++ V+ +A+ LP + WRVF+H+ +NR  SP L+T+Y+L
Sbjct:    9 SSPLASHLPLSRLLWKQGLKPGGRAVDATCGNGKDSLFLSTLIFPSDGDDETEAELICIDVQREAIGSTRSLLAEELRPPHLERIRLFHQSHERFPDCIADNSVDVIVYNLGYLPGGDKSVTTRHDTTITSLTAALKLIVKGGLISVMLYRGHPEGTVESDGVISWASQLPADEWRVFLHEPLNRPTSPALMTLYRL 205          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A836C882_9STRA (Putative rRNA methylase-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C882_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.970e-46
Identity = 85/198 (42.93%), Postives = 124/198 (62.63%), Query Frame = 0
Query:  250 LSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGV---------GKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAE----LGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRT-GSPVLLTIYKL 433
            L+HLLW+    PGD V+DCTAG G+D+L LA+++  +  +         G+L  +DVQ+ A+  T ARL+  L   A +R ++++ +FC+LP      +   SV L+ YNLG+LPG DKS+ + ++DTL+S++ A +LVK GG IS+  Y GH EG  E  AV E+ AGL    WRVF H R+N   G P+L+  YK+
Sbjct:    2 LAHLLWKSAVSPGDIVIDCTAGKGYDSLVLARLLFPDSALDGEAAAAAQGQLVCIDVQESAVAQTQARLQQALPPQAMQRISVLQQSFCELPPACEPPIAERSVALVAYNLGFLPGSDKSVCSTVQDTLDSLNKASKLVKLGGAISVTCYPGHEEGAAEVAAVKEWGAGLATREWRVFEHSRLNSPEGVPLLVVAYKV 199          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A7W0JF15_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W0JF15_9BACT)

HSP 1 Score: 157 bits (398), Expect = 1.930e-42
Identity = 87/186 (46.77%), Postives = 112/186 (60.22%), Query Frame = 0
Query:  247 HSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKG--NFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTI 430
            H  L+H  W+Q    GD+ +D T GNGHDTLEL K+ AL++  G ++A D+Q  ALE T  RL   L      R TL+K   +   LP E     ++LIVYNLG+LPG DK+ TT ++ TL S+ SA  L+  GG+ISI  Y GHPEG  E EA+LE+AA LP   W    H  +NR  +P LL I
Sbjct:   11 HLQLAHTNWQQYLSIGDSAIDATCGNGHDTLELCKL-ALSNTNGHIFAFDIQAAALETTALRLRENLSPTIFNRVTLLKKCHSDLTLPFEFEE-PIKLIVYNLGYLPGADKAQTTCVQSTLRSLKSATTLLAPGGLISITCYPGHPEGALEEEALLEFAAKLPRETWNCCHHRWINRQRAPSLLLI 194          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A5C7WT25_9PROT (Methyltransferase domain-containing protein n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7WT25_9PROT)

HSP 1 Score: 157 bits (397), Expect = 2.400e-42
Identity = 82/189 (43.39%), Postives = 116/189 (61.38%), Query Frame = 0
Query:  246 SHSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRT-GSPVLLTIYKL 433
            SH  L+H  W+Q+   GDTV+D T GNGHDTL LA++V ++D  G +Y +D+Q  A++ +   L  EL     +R  L++      P  + A SV+LIVYNLG+LPGG+KS+TT +E TL+S+++A +L+  GG +SI LY GHPEG  E   VL     L  + W    H  +NR   +P LL + KL
Sbjct:    9 SHLDLAHTYWKQLVSIGDTVIDATCGNGHDTLMLARLV-IDDSAGDVYGLDIQSTAIDNSRQLLHQELPTHHLQRIHLLQQCHSTFPDMITAASVKLIVYNLGYLPGGNKSLTTRVETTLQSLNAAVKLLSPGGCLSITLYPGHPEGAIEESQVLPLIRSLSSSEWSCCHHQWINRPISAPSLLLVQKL 196          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A7W1U209_9BACT (Methyltransferase domain-containing protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U209_9BACT)

HSP 1 Score: 155 bits (393), Expect = 8.000e-42
Identity = 80/186 (43.01%), Postives = 113/186 (60.75%), Query Frame = 0
Query:  247 HSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYK 432
            H  ++H LW +   PGDTV+D T GNG DT  LAK+ ALN   G L+A+D+Q +A+  T   LE EL +    R T ++      P  +   SV+LI+YNLG+LPG +K++TT  E TL+S+  A++L+   G+I +  Y GH EGK+E  A+L+Y   LP   W+V     VNR G+P LL + K
Sbjct:    7 HLDMAHSLWHESVQPGDTVIDATCGNGQDTRILAKL-ALNAHQGTLFALDIQAQAIVTTRNLLEQELPQDLFNRITFLEQCHSHFPEAVLENSVRLIIYNLGYLPGANKALTTRTETTLQSLQEAQKLLLENGIICVTCYPGHDEGKKEEAALLDYVRSLPTTEWQVSFTQWVNRVGAPSLLVLRK 191          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A2K1J9B5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J9B5_PHYPA)

HSP 1 Score: 159 bits (402), Expect = 1.680e-41
Identity = 74/183 (40.44%), Postives = 120/183 (65.57%), Query Frame = 0
Query:  250 LSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYK 432
            ++H +WR+V   GDTVVD T GNGHDTL L K+V  ++ +G +YA DVQ+ AL  +   L+  L  +  KR  L++    QL   +G   ++L+ +NLG+LPGGD ++ T ++ T++++ S+  +++SGG+IS++ Y GHP G+ E +AV+++ + LP N W    H+ VNR  SP L+ ++K
Sbjct:  147 VAHGVWRKVVRSGDTVVDATCGNGHDTLALVKMVCADNALGYVYAFDVQEDALANSSYLLDQRLDSVQRKRVKLLRLCHSQLENIVGETPIRLVTFNLGYLPGGDHNVVTNVDTTIQALQSSSNVLQSGGLISVVAYVGHPGGREEYDAVMDFGSKLPKNTWVCSQHEWVNRPLSPRLILMFK 329          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A7W1GVU4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1GVU4_9BACT)

HSP 1 Score: 154 bits (388), Expect = 5.180e-41
Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 0
Query:  246 SHSHLSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYK 432
            SH  L+H  W+++   GD+V+D T GNG DTL LA++  L +G G +YAMD+Q +AL++    L   L          + G   Q P E+   +++LIVYNLG+LPGGDK  TT +E TL+S++SAK L+  GG++ I  Y GH  G  E E ++ +AA LP+  W    H  +NR  SP LL + K
Sbjct:   10 SHLDLTHQYWKKLIQQGDSVIDATCGNGKDTLCLAQLT-LAEGKGIIYAMDIQKQALDSARHYLSMHLSPQQFLDIEFILGCHSQFPVEIKPLTIKLIVYNLGYLPGGDKKQTTQMESTLKSLESAKNLIAPGGVLCITCYPGHDAGAIEEEGLMIFAANLPNTEWSCCHHRWLNREKSPSLLLLQK 195          
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Match: A0A212KTZ8_9CHLA (rRNA methylase YtqB n=1 Tax=Chlamydiales bacterium SCGC AG-110-M15 TaxID=1871324 RepID=A0A212KTZ8_9CHLA)

HSP 1 Score: 153 bits (386), Expect = 1.020e-40
Identity = 80/183 (43.72%), Postives = 109/183 (59.56%), Query Frame = 0
Query:  250 LSHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDRALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWLPGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVLEYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYK 432
            L+H  W  +  PGD V+D T GNGHDTL LA IV  N   GK+ A D+QD+A++ + +RL+  L   + ++ +  +     LP +     V+LIVYNLG+LPG DKS TT    TLES+D A +L+   G ISIM Y GHPEGK E  A++E+A  L    W    H ++N   +P L+ I K
Sbjct:   15 LAHSYWESLLSPGDCVLDLTCGNGHDTLFLANIVLKNQK-GKIIAYDIQDQAIQQSKSRLKEILDAKSMQQISFYQKCHSLLPKKEELPEVKLIVYNLGYLPGADKSQTTKTRSTLESLDKATQLISPAGAISIMCYPGHPEGKLEESAIIEWAQKLNVQEWHCCHHQQINGNKAPSLMLIQK 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4747.11870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV3_ECTSI1.500e-10866.54Methylase-related n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JPN0_9PHAE1.010e-10464.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4GWR6_VITBC1.180e-4644.16Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A836C882_9STRA2.970e-4642.93Putative rRNA methylase-domain-containing protein ... [more]
A0A7W0JF15_9BACT1.930e-4246.77Class I SAM-dependent methyltransferase n=1 Tax=Pa... [more]
A0A5C7WT25_9PROT2.400e-4243.39Methyltransferase domain-containing protein n=1 Ta... [more]
A0A7W1U209_9BACT8.000e-4243.01Methyltransferase domain-containing protein n=1 Ta... [more]
A0A2K1J9B5_PHYPA1.680e-4140.44Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A7W1GVU4_9BACT5.180e-4142.25Class I SAM-dependent methyltransferase n=1 Tax=Pa... [more]
A0A212KTZ8_9CHLA1.020e-4043.72rRNA methylase YtqB n=1 Tax=Chlamydiales bacterium... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableGENE3D3.40.50.150coord: 241..433
e-value: 1.6E-53
score: 183.0
IPR010719Putative rRNA methylasePFAMPF06962rRNA_methylasecoord: 292..430
e-value: 2.0E-36
score: 125.0
IPR010719Putative rRNA methylasePANTHERPTHR35276FAMILY NOT NAMEDcoord: 222..432
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 258..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4747contigH-elongata_contig4747:7028..10716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4747.11870.1mRNA_H-elongata_contig4747.11870.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4747 7028..10831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4747.11870.1 ID=prot_H-elongata_contig4747.11870.1|Name=mRNA_H-elongata_contig4747.11870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=434bp
MAALAYPARAFFPASLSKLNRHTATPRKSAGCPTLATARRCYSTCSRGSW
LSLSATDQTEDATRAAEDAAKAAVLAGVKVLNQVIADVGSNKVDVDKADV
VRTMANAARATAQSALASLESKIERASLAAEEEGAGDTTDVFVPREDVVG
SPGRIVVEVALSSTTARDAARAAQAALQRQDSAAAELGLSAKDGLGTASV
ATSDVSKTGATHGGVRVDAPDDEGEEDLMGKEPDSARTTRNSPAASHSHL
SHLLWRQVAGPGDTVVDCTAGNGHDTLELAKIVALNDGVGKLYAMDVQDR
ALEATLARLESELGRMATKRSTLVKGNFCQLPAELGACSVQLIVYNLGWL
PGGDKSITTVLEDTLESIDSAKRLVKSGGMISIMLYQGHPEGKRETEAVL
EYAAGLPHNRWRVFVHDRVNRTGSPVLLTIYKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010719rRNA_methylase
IPR029063SAM-dependent_MTases