prot_H-elongata_contig47442.11864.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI) HSP 1 Score: 241 bits (615), Expect = 9.400e-71 Identity = 116/151 (76.82%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 13 SGVRPTVSKPFTIDLEAVGVTGFIKASVFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDSEVLSILAVNGYARATVEDALLGCPLRASADDWDWASFR 163
+G VSKPFTIDLE G+TGFIKA+ F+EGFHEPALALLYEPIQTC GRLAS RSTCRL +LS+NL QGRAPVIW+V +LPHDSWDLV VP PIGG+QVISTNAV+HVN SEV SILAVNGYARATV+ ALL CPLR DW W SFR
Sbjct: 283 AGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFR 433
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: A0A397HFG4_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HFG4_9GLOM) HSP 1 Score: 103 bits (256), Expect = 1.800e-22 Identity = 49/105 (46.67%), Postives = 72/105 (68.57%), Query Frame = 0
Query: 41 FMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDSEVLSILAVNGYARATVEDAL 145
F+ F+EP LA+L+EP QT PG+L S + +C L+V+SL + Q P+I + +LPH L+++P P+GGI +IS NA+IHVN S +AVNGYA +T + +L
Sbjct: 237 FLHDFYEPTLAILFEPCQTWPGKLNSTKDSCSLVVVSLLISQKAYPIIQSMDNLPHSCVKLISIPKPVGGILIISANAIIHVNQSSKGIGVAVNGYASSTTDFSL 341
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: UPI000A2A51A4 (cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A51A4) HSP 1 Score: 102 bits (253), Expect = 4.520e-22 Identity = 45/85 (52.94%), Postives = 65/85 (76.47%), Query Frame = 0
Query: 41 FMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDS 125
F+ G++EP L +LYEPI+T GRLA R TC L+ +SLN+ + PVIW++S LP+DS+ ++AVP PIGG+ V STNA++++N S
Sbjct: 210 FLHGYYEPTLLILYEPIKTWAGRLAMRRDTCALVAVSLNMSERVHPVIWQLSSLPYDSYSVLAVPKPIGGVLVFSTNALLYLNQS 294
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: UPI0009E1A363 (cleavage and polyadenylation specificity factor subunit 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1A363) HSP 1 Score: 99.8 bits (247), Expect = 2.890e-21 Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 0
Query: 8 GASRVSGVRPTVSKPFTIDLEAVG--VTGFIKASVFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDS 125
GA SG R + +TI+L+ + + I F+ G++EP L LLYEP+QT PGRLA TC L+ +SLNL Q PV+W +++LP D ++AVP PIGG+ + +TN+++++N S
Sbjct: 182 GAFTGSGDRSPLLPSYTINLKDIHDKLCNIIDVQ-FLHGYYEPTLLLLYEPLQTWPGRLAMRHDTCALVAVSLNLSQRTHPVVWSLNNLPFDCSQVLAVPKPIGGVLICATNSLLYLNQS 300
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: UPI000C05354C (cleavage and polyadenylation specificity factor subunit 1-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C05354C) HSP 1 Score: 98.6 bits (244), Expect = 3.440e-21 Identity = 50/120 (41.67%), Postives = 76/120 (63.33%), Query Frame = 0
Query: 8 GASRVSGVRPTVSKPFTIDLEAVG--VTGFIKASVFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDS 125
G SG R + +TI+L+ + + I F+ G++EP L +LYEP+QT PGRLA TC L+ +SLNL Q PV+W +++LP D ++AVP PIGG+ V +TN+++++N S
Sbjct: 182 GTFTASGDRSPLLPSYTINLKDIHEKLCNIIDIQ-FLHGYYEPTLLILYEPLQTWPGRLAMRHDTCALVAVSLNLSQRTYPVVWSLNNLPFDCSQVLAVPKPIGGVLVCATNSLLYLNQS 300
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: UPI001CF1DE45 (cleavage and polyadenylation specificity factor subunit 1-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF1DE45) HSP 1 Score: 98.6 bits (244), Expect = 7.310e-21 Identity = 49/115 (42.61%), Postives = 75/115 (65.22%), Query Frame = 0
Query: 13 SGVRPTVSKPFTIDLEAVG--VTGFIKASVFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDS 125
SG R + +TI+L+ + + I F+ G++EP L LLYEP+QT PGRLA TC L+ +SLNL Q PV+W +++LP D ++AVP PIGG+ + +TN+++++N S
Sbjct: 186 SGDRSPLLPSYTINLKDIHDKLCNIIDVQ-FLHGYYEPTLLLLYEPLQTWPGRLAMRHDTCALIAVSLNLSQRTHPVVWSLNNLPFDCSQVLAVPKPIGGVLICATNSLLYLNQS 299
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: A0A4Y2GB93_ARAVE (Cleavage and polyadenylation specificity factor subunit 1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GB93_ARAVE) HSP 1 Score: 97.1 bits (240), Expect = 2.210e-20 Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 13 SGVRPTVSKPFTIDLEAVGV-TGFIKASVFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDS 125
SGV+ V +TI + +K F++G++EP L LL+EP++T PGR A TC +L LSLN+ Q PVIW VS LP DS +AVP PIGG+ +++ N+++++N S
Sbjct: 170 SGVKTPVLASYTIKFSDIDEKVNNVKDFQFLQGYYEPTLLLLHEPLRTWPGRTAVRHDTCAILALSLNINQRVHPVIWTVSGLPFDSLYAMAVPKPIGGVLLVAVNSLLYLNQS 283
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: L8GPK4_ACACA (CPSF A subunit region protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPK4_ACACA) HSP 1 Score: 96.7 bits (239), Expect = 3.440e-20 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 0
Query: 19 VSKPFTIDLEAVGVTGFIKASVFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRA-----PVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVN 123
V F +DL A+G+ +K VF++G++EP L +LYEP QT GR+A R+TC +SLNL Q R PV+W LP+D+ L+AVP PIGG +STN+++++N
Sbjct: 204 VKPSFLLDLRAMGIIN-VKDFVFLQGYYEPTLLILYEPTQTWSGRVAVNRNTCVAAAVSLNLWQHRGQTSAHPVVWSAEFLPYDTQRLIAVPGPIGGALALSTNSLLYLN 312
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: A0A1Y1Y6W0_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6W0_9FUNG) HSP 1 Score: 96.3 bits (238), Expect = 4.680e-20 Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 0
Query: 40 VFMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDSEVLSILAVNGYA 137
+F+E ++EP LA+LYEP+QT L++ + TC L V+SL+L + PVI+ + LP+D L+ VP PIGGI ++S NA+IHV+ S +AVNG+A
Sbjct: 204 IFLEDYYEPTLAILYEPVQTNTVLLSTRKDTCALAVVSLDLTKKLYPVIYSIDSLPYDCIKLIPVPKPIGGILIVSANALIHVDQSSPGQGIAVNGHA 301
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Match: A0A0L0HAP2_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HAP2_SPIPD) HSP 1 Score: 95.5 bits (236), Expect = 8.780e-20 Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = 0
Query: 41 FMEGFHEPALALLYEPIQTCPGRLASMRSTCRLLVLSLNLIQGRAPVIWRVSDLPHDSWDLVAVPDPIGGIQVISTNAVIHVNDSEVLSIL-AVNGY 136
F+ GF EP LA+LYEPIQT GRLA+ + T L+V+SL++ Q PV+++V LP+++ L+ VP P+GG+ V+S NA+IHV+ + V + AVN Y
Sbjct: 241 FLYGFFEPTLAILYEPIQTWTGRLAARKDTKSLIVVSLDITQRSYPVLFKVDHLPYNATSLIPVPPPVGGLVVLSPNALIHVDQTSVPGVACAVNSY 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47442.11864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig47442.11864.1 ID=prot_H-elongata_contig47442.11864.1|Name=mRNA_H-elongata_contig47442.11864.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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