prot_H-elongata_contig47314.11845.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47314.11845.1
Unique Nameprot_H-elongata_contig47314.11845.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 9.310e-34
Identity = 78/202 (38.61%), Postives = 116/202 (57.43%), Query Frame = 0
Query:    5 GTNGPGH-AEDLLMFAAKYKCDFIAIQQTRRDGRTIIQAPAAGYVVHRSGHCDGDGGKPGILGVCLAVKKSITPALGPDGIVPEHISARLLKVRVIFNHRAVTTFIVGYAPTETEATCH------KSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            G N  GH    ++   +   CD I +Q+TRR+G+  I     GYV+  SG   G   K G  GV +A+K++I  ++G +G   E IS RL+KVR+        TF+VGYAPTET  +        K  +W  L + + EV + DHL+++MGAN RTG R +G      +++G  GRD +N+NG RLL  +++++LS+ NT F
Sbjct:   23 GRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDG--CCDAKIMGANGRDIMNNNGERLLELASDNQLSLTNTYF 220          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.660e-21
Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   78 ALGPDGIVPEHISARLLKVRVIFNHRAVTTFIVGYAPTETEATCH------KSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            ++G +G   E IS RL+KVR+        TF+VGYAPT+T  T        K  +W  + + + EV + DHL+++M AN RTG R +G      +++G YGRD++N+NG RLL  +++++LS+ NT F
Sbjct:    4 SVGEEGRTVECISLRLMKVRLQIGRTCGVTFVVGYAPTDTVRTTAGGDVNAKDSFWTAVDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDSMNNNGERLLGPASDNQLSLTNTYF 129          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: A0A6H5KRE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 9.410e-20
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   78 ALGPDGIVPEHISARLLKVRVIFNHRAVTTFIVGYAPTETEATCH------KSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            ++  DG V E IS RL+KVR+        TF+VGYAP +T  T        K  +W  L + + E  + DHL+++MGAN RTG R +G      +++G YGRD +N+NG RLL  ++++ LS+ NT F
Sbjct:  112 SIAHDGTV-ECISPRLMKVRLTIGRTCGVTFVVGYAPAKTVRTTAGGDLNAKDSFWTALDAALREFQSRDHLVVLMGANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNHLSLTNTYF 236          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: A0A654HQ13_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HQ13_9CEST)

HSP 1 Score: 68.9 bits (167), Expect = 3.610e-10
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   66 GVCLAVKKSITPALGPDGIVPEHISARLLKVRVIFNHRAVTTFIVGYAPTETEATCHKSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            GV   ++  I   +G    +P+ I+ RL+ +R+        T +  YAP  T     + K+++++ + +A V  +D LI++   NVR G  +     G   VLGP+GR+ LNDNG  LL   AE +L + NT F
Sbjct:  312 GVAFTIRNDI---VGQLLCLPQGINNRLMSLRLPLGRGKFVTILSVYAPPMTSPDTERDKFYEDIHTLLATVSKADKLIVLGDFNVRVG-TDHAAWRG---VLGPHGRNGLNDNGLLLLRTCAEQRLILTNTFF 438          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: A0A224XIY2_9HEMI (Putative rna-directed dna polymerase from mobile element jockey (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XIY2_9HEMI)

HSP 1 Score: 62.0 bits (149), Expect = 8.950e-8
Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 0
Query:   27 IAIQQTRRDGRTIIQAPAAGYVVHRSGHCDGDGGKPGILGVCLAVKKSITPALGPDGIVPEHISARLLKVRVIFNHRAVTTFIVGYAPTETEATCHKSKYWKELRSTVAEVPASDHLILMMG-ANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            +AI +T++ G    +  + GY++  SG       K    GV   V K IT  +     + E I    LK +   N++   T I  Y P E E T  K K+++ L+ TV +    D ++L++G  N R G  +     G  +VLGPYG +T N+ G RLL     + L + NT +
Sbjct:   63 VAITETKKKGTGCTEI-SDGYILIHSGVPTNTRAK---AGVAFLVHKDITGQIEGWKYINERILTLKLKDQ---NNKETFTLIAVYGPNEDELTEVKDKFFETLQKTVDD---EDGILLVLGDLNGRVGNCQ----TGYEKVLGPYGEETRNNIGKRLLQFCLANDLVLFNTRY 222          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: UPI001D089350 (craniofacial development protein 2-like n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D089350)

HSP 1 Score: 61.2 bits (147), Expect = 1.050e-7
Identity = 45/175 (25.71%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   23 KCDFIAIQQTRRDGRTIIQAPAAGYVVHRSGHCDGDGGKPGILGVCLAVKKSITPALGPDGIVPEHISARLLKVRV-IFNHRAVTTFIVGYAPTETEATCHKSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVN 196
            K D   I +T++ G+    + + GY  H       D  +    G+ + +++++   +       E IS R++K+ + I+ HR  TT I  Y   +      K K++++L++ + +V  S  +I++   N R G           +++GPYG DT NDNG RL++   ++ + I+N
Sbjct:   12 KLDIAVITETKKKGQG---SESMGYYDHFYSGVPKD--RRAQQGISILIRRNLRKYIQSW----EAISERIIKMNLTIYGHR--TTIIEVYGVNDDSLVSTKDKFFEDLKNEIMKVGKSREIIILGDLNSRVGKNRNS------QIVGPYGEDTRNDNGNRLITLCEQNDVKIMN 169          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: A0A6J2YSY1_SITOR (craniofacial development protein 2-like n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YSY1_SITOR)

HSP 1 Score: 56.6 bits (135), Expect = 1.240e-6
Identity = 36/135 (26.67%), Postives = 67/135 (49.63%), Query Frame = 0
Query:   65 LGVCLAVKKSITPALGPDGIVPEHISARLLKVRVIFNHRAVTTFIVGYAPTETEATCHKSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            LGV + +K+++   +       E IS R++K+ +      +T F V Y   +      K K++++L + + +V     +I++   N R G   +       +V+GPYG DT NDNG RL++   ++   I+N  +
Sbjct:   19 LGVSVLIKRNLRKHVHSW----EAISERIIKINMTVRENRITIFGV-YCIDDDSLVNVKDKFFEDLNNEITKVGKIREIIILGDLNCRVGKSTDS------QVVGPYGEDTKNDNGNRLIALCVQNDFKIMNGFY 142          
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Match: UPI001D0708D2 (craniofacial development protein 2-like n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0708D2)

HSP 1 Score: 57.8 bits (138), Expect = 1.610e-6
Identity = 54/196 (27.55%), Postives = 86/196 (43.88%), Query Frame = 0
Query:   10 GHAEDLLMFAAKYKCDFIAIQQTRRDGRTIIQAPAAGYVVHRSGHCDGDGGKPGILGVCLAVKKSITPALGPDGIVPEHI------SARLLKVRVIFNHRAVTTFIVGYAPTETEATCHKSKYWKELRSTVAEVPASDHLILMMGANVRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF 199
            G  E+L     +   + +AI +T++ G+  +       VV+   + +       + GV   + K+IT          EH+      S R+L V  I N   + T I+ Y P E +    K  +W++L  TV    A   +I++   N R G     G      V+GP+G +T N+NG R+L     + L I NTLF
Sbjct:   46 GKEEELEREFEEMGLEILAITETKKKGKGTVDTKNGHLVVYSGVNEE----MRAMAGVGCMINKNIT----------EHVNGWKGWSERILTVE-IENKDEMKTVIIVYGPNEDDNKQTKDSFWEDL--TVVTERAKGTIIILGDFNSRVGK----GDRMFESVMGPFGEETRNNNGERMLDFCLLNDLIITNTLF 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47314.11845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KZE6_9PHAE9.310e-3438.61Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5J5Z5_9PHAE5.660e-2139.84Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRE7_9PHAE9.410e-2040.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A654HQ13_9CEST3.610e-1032.84Uncharacterized protein n=1 Tax=Sparganum prolifer... [more]
A0A224XIY2_9HEMI8.950e-831.03Putative rna-directed dna polymerase from mobile e... [more]
UPI001D0893501.050e-725.71craniofacial development protein 2-like n=1 Tax=Co... [more]
A0A6J2YSY1_SITOR1.240e-626.67craniofacial development protein 2-like n=1 Tax=Si... [more]
UPI001D0708D21.610e-627.55craniofacial development protein 2-like n=1 Tax=Co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 7..198
e-value: 5.3E-12
score: 47.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 13..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47314contigH-elongata_contig47314:3508..4104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47314.11845.1mRNA_H-elongata_contig47314.11845.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47314 3508..4128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47314.11845.1 ID=prot_H-elongata_contig47314.11845.1|Name=mRNA_H-elongata_contig47314.11845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MSERGTNGPGHAEDLLMFAAKYKCDFIAIQQTRRDGRTIIQAPAAGYVVH
RSGHCDGDGGKPGILGVCLAVKKSITPALGPDGIVPEHISARLLKVRVIF
NHRAVTTFIVGYAPTETEATCHKSKYWKELRSTVAEVPASDHLILMMGAN
VRTGGREEGGGLGGVRVLGPYGRDTLNDNGPRLLSCSAEHKLSIVNTLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf