prot_H-elongata_contig47302.11842.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47302.11842.1
Unique Nameprot_H-elongata_contig47302.11842.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
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BLAST of mRNA_H-elongata_contig47302.11842.1 vs. uniprot
Match: D8LGS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS7_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 7.450e-60
Identity = 105/185 (56.76%), Postives = 128/185 (69.19%), Query Frame = 0 
Query:    1 VAGIWSVANGEAFFVNFYDPKAVINFELTILCGWWAELGLPPVAIMTDSDIEGLAAYVIQGISLQIPQPGHKGRVDMAEASLHFDPGPPPPRFEFDRLRISPQRVGRQSEEQS--HP---SDKARSVVWKGLRKFGRRPVLLALARDEPSSMIVRGWDSSMAWRMTNVITFHEVDWKLWTQPRKP 180
            V  +W+V++GEA  V+ YD KAV N E+T+LCGWWAELG+  +  M  + + GLAAY++Q ISLQIPQP  KGRVDM++ASL F PGPPPP FEF   + +P+     SE  +   P      A  VVW+G+R   RR VLLA AR+ PS MIVRGWDSSMAWRMTNVITFHE DWK W    +P
Sbjct:   58 VLSVWAVSDGEAITVSVYDHKAVQNLEITLLCGWWAELGITGLKSMAPAGLSGLAAYLVQSISLQIPQPDRKGRVDMSKASLQFSPGPPPPPFEFGPSQFNPRNPSDGSEGGTTLRPPVGGRMASRVVWRGIRTLRRRAVLLACARNGPSMMIVRGWDSSMAWRMTNVITFHEDDWKTWKDVTEP 242
[Close]
BLAST of mRNA_H-elongata_contig47302.11842.1 vs. uniprot
Match: A0A6H5KDQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 8.890e-44
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 0 
Query:    1 VAGIWSVANGEAFFVNFYDPKAVINFELTILCGWWAELGLPPVAIMTDSDIEGLAAYVIQGISLQIPQPGHKGRVDMAEASLHFDPGPPPPRFEFDRLRISPQRV--GRQSEEQSHPSDKARS---VVWKGLRKFGRRPVLLALARDEPSSMIVRGWDSSMAWRMTNVITFHEVDWKLWTQPRKP 180
            V  +W+V++GEA  V+ YD KAV N E+T+LCGWWAELG+  +  M  + + GLAAY++Q ISLQIPQP  KGRVDM++ASL F PGPPPPRFEF   +   +    G ++ +   P    R+   VVW+G+R   RR VLLA AR+                     ITFHE DWK W    +P
Sbjct:   58 VLSVWAVSDGEAMTVSVYDHKAVQNLEITLLCGWWAELGITGLKSMAPAGLSGLAAYLVQSISLQIPQPDRKGRVDMSKASLQFSPGPPPPRFEFGPSQFDRRNPSDGSEAGDTLRPPVGGRTASRVVWRGIRTLRRRAVLLACARN---------------------ITFHEDDWKTWKDVTEP 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47302.11842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGS7_ECTSI7.450e-6056.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDQ5_9PHAE8.890e-4445.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47302contigH-elongata_contig47302:933..2364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47302.11842.1mRNA_H-elongata_contig47302.11842.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47302 933..2364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47302.11842.1 ID=prot_H-elongata_contig47302.11842.1|Name=mRNA_H-elongata_contig47302.11842.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
VAGIWSVANGEAFFVNFYDPKAVINFELTILCGWWAELGLPPVAIMTDSD
IEGLAAYVIQGISLQIPQPGHKGRVDMAEASLHFDPGPPPPRFEFDRLRI
SPQRVGRQSEEQSHPSDKARSVVWKGLRKFGRRPVLLALARDEPSSMIVR
GWDSSMAWRMTNVITFHEVDWKLWTQPRKP
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