prot_H-elongata_contig47123.11814.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47123.11814.1
Unique Nameprot_H-elongata_contig47123.11814.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length417
Homology
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: D8LHG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG4_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.180e-88
Identity = 193/329 (58.66%), Postives = 227/329 (69.00%), Query Frame = 0
Query:    1 SKVASQAYPVVLPAHCQASGTINYSKGI---GGIDWGTSAA-VASSSATHTNAGCGVAKISSMFHAPSTQAVGGLSQRVVSYTLLCLLALLWVQDASCVYWTAFAAAVXXXXXXXXXXXXGEACEGLVPIAHFGFPAEFHLINEEIGEIIGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQGHVQESKLGKSCGTGAVPGGPNIDLAGTRTVKEILRAVHTKRMSAEVGRRLSTTTADPLSPAAAARSTAPAA 325
            ++VASQAYP+ +P     S T   ++      G+  GTS+A V + S++ T    G + + + F AP    + G + R  S  LLC L LL     S ++W       XXXXXXXXXXXX    EG  P+AHFGFPAEFHLINEE GE+ G GERPQI LAVSSLD LARHRVEGYGY++ PRQ GAH L +RTWRP+CS   R H  DFFVGGAHRL DPRYASKP SF+G+FLSRFGFRTE+SGTLRVRLHLAEQG V++ +  +S G G   GGP IDLAGTRTVKEILR V+ KRM  E+GRR S T  DP SP+AAA  T PAA
Sbjct:  475 TQVASQAYPLAVPHRSVRSATTTTTRKSDTRSGLGHGTSSASVTTLSSSSTINTYGNSAMPAAFQAPPKIVMSGAALRATSAILLCFLGLLASLGESPLFWVVLGGXXXXXXXXXXXXXXXX--EGGSPVAHFGFPAEFHLINEEEGEMAGIGERPQILLAVSSLDGLARHRVEGYGYVSFPRQPGAHELHIRTWRPVCS--IRTHLQDFFVGGAHRLHDPRYASKPGSFRGTFLSRFGFRTETSGTLRVRLHLAEQGRVRDLRA-ESGGEG---GGPTIDLAGTRTVKEILRVVNAKRMGVEIGRRFSATV-DPASPSAAAAPTTPAA 794          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: UPI000719CB83 (Meckel syndrome type 1 protein-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CB83)

HSP 1 Score: 114 bits (285), Expect = 5.880e-24
Identity = 62/140 (44.29%), Postives = 85/140 (60.71%), Query Frame = 0
Query:  119 ACEGLVPIAHFGFPAEFHLI--NEEIGEIIGTGER---PQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQ 253
            A  G   +AHF FP EF L    E I +  GT E    PQ+++ V SLD+  R+R EGYGY+TLP   G     + TWRP+   I R     FFVGG+  L DP Y S P +F+G+ LS+FGF+TES+G++ +R++  +Q
Sbjct:  327 AVHGRDNVAHFSFPFEFELFYKKETIEDEKGTDEMMRWPQLYIEVLSLDSWHRYRTEGYGYITLPTSPGCRMETLNTWRPVGHSI-RDELRRFFVGGSPELEDPTYVSVPSTFEGAHLSKFGFKTESTGSVTIRINTIQQ 465          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: UPI001455BB23 (Meckel syndrome type 1 protein-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455BB23)

HSP 1 Score: 114 bits (284), Expect = 9.570e-24
Identity = 62/150 (41.33%), Postives = 94/150 (62.67%), Query Frame = 0
Query:  126 IAHFGFPAEFHLI--NEEIGEIIGTGER----PQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQGHV--QESKLGKSCGT 267
            +A+F +P +  L   +EE+G+     E     PQIFL V S+D   R+R EGYGYLT+P + G H + V+TWRP    +F   R  FF+GG+  L DP Y S P + +G+ +SRFGF+TE++G+++V+L+L +Q  +  ++S   K  GT
Sbjct:  377 VAYFSYPFDVELCYRHEEVGQDGDNPELLPQWPQIFLEVLSIDTWQRYRTEGYGYLTIPSKPGIHTIEVQTWRPCGRNVFDNMRR-FFIGGSPELEDPTYISVPPTHEGAVMSRFGFQTEATGSVKVKLNLLQQSQIFMEKSTSKKKVGT 525          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: A0A8B7Y382_ACAPL (Meckel syndrome type 1 protein-like isoform X1 n=4 Tax=Valvatida TaxID=41166 RepID=A0A8B7Y382_ACAPL)

HSP 1 Score: 109 bits (272), Expect = 3.530e-22
Identity = 59/142 (41.55%), Postives = 87/142 (61.27%), Query Frame = 0
Query:  126 IAHFGFPAEFHLI--NEEIGEIIGTG----ERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQGHVQESKL 261
            +A+F +P +  L    EE+GE         + PQIFL V S+D+  R+R EGYGYLT+P   G H + V+TWRP     F   R  FF+GG+  L DP Y + P + +GS +SRFGFRTE++G++ ++L+L +Q  +   K+
Sbjct:  377 VAYFCYPFDLELFYKQEELGEEEHREPLLPQWPQIFLEVLSIDSWQRYRTEGYGYLTIPSTPGIHTVEVQTWRPSGQHYFNNLRR-FFIGGSPELEDPTYVAVPPTHEGSVISRFGFRTEATGSVTLKLNLLQQSQIFMDKV 517          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: UPI00109BA272 (Meckel syndrome type 1 protein n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA272)

HSP 1 Score: 106 bits (265), Expect = 3.000e-21
Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 0
Query:  120 CEGLVPIAHFGFPAEFHLINEEIGEIIGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQ-GHVQESKLGK 263
            C G   +A+F FP +F LI +E  E       P +F+ V SLD+  RHR EGYG +T+P Q G H + V TWRPI +      R  FF+GG+  L DP Y  +P + +   LS+F FRT +SG++ +RL++ +Q     ESK  K
Sbjct:  391 CSGKDNVAYFSFPFDFSLIYKEKEESDDFIRWPVLFIEVLSLDSWERHRTEGYGMITIPNQPGIHEITVNTWRPIGNGTVPELRR-FFIGGSPELEDPTYPQQPVATEEKVLSKFYFRTVTSGSVTIRLNVIQQCQEFMESKKAK 534          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: A0A7S2BNE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNE2_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.740e-21
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 0
Query:  117 GEACEGLVPIAHFGFPAEFHLINE--EIGEIIGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSF-------KGSFLSRFGFRTESSGTLRVRLHLAE 252
            G+  E + P+AHFG P  F++++   + GE++     P +   VSS+ +  RHR++GYGY  LP   G+    + TWRP  +  F     DFFVGGA+RL+D RY + P +           FLS+FGF T+SSG +RVR+H  E
Sbjct:  383 GDVTESIQPVAHFGLPIRFNVLSSHSDSGELMMA--TPLVLFQVSSVHSFERHRIQGYGYARLPVAAGSKEAEISTWRP--AGDFSSQLADFFVGGANRLSDLRYIAHPPASGQQGHASSTRFLSKFGFLTQSSGKVRVRVHAME 523          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: A7SA52_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SA52_NEMVE)

HSP 1 Score: 104 bits (259), Expect = 7.330e-21
Identity = 55/140 (39.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:  126 IAHFGFPAEFHLINEEIGEIIGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICS-PIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQGHV-QESKLGK 263
            +AHF FP E+ L+ +         + P +F+ V SLD+  RHR EGYGY  +P + G+H +++ TWRPI + P+    R  FF+GG+  L DP Y  +P + +   LS+F FRT +SG++ +RL++ +Q     ESK  K
Sbjct:  244 VAHFCFPFEYSLVYDARHSPDAFVKWPLLFVEVMSLDSWERHRTEGYGYTVIPNKAGSHEIVINTWRPIGNGPVPELRR--FFIGGSPELEDPTYPQQPVATEEKVLSKFYFRTATSGSVTIRLNVVQQCQAFMESKKSK 381          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: A0A821X6W9_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821X6W9_9NEOB)

HSP 1 Score: 98.2 bits (243), Expect = 1.070e-20
Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 0
Query:  126 IAHFGFPAEFHLINEEIGEIIGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPI-CSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQ 253
            +AHF  P  F +   E  E     + P ++  V SLD   R+RVEGYG + LP+  G HN+  +TWRP+    +    R  FF+GG+  L D  YA  P +F+G  LSRFGFRTE++G +  R+H   Q
Sbjct:   33 VAHFCHPFSFEMFLSEEVESEDLPQWPVLYFEVLSLDFWQRYRVEGYGSVVLPQTPGMHNITAQTWRPVEQGTVSELRR--FFIGGSPELEDMTYAKIPSTFQGERLSRFGFRTETTGRVVFRVHSIHQ 159          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: UPI0003F0D2F6 (Meckel syndrome type 1 protein homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D2F6)

HSP 1 Score: 104 bits (259), Expect = 1.530e-20
Identity = 56/143 (39.16%), Postives = 89/143 (62.24%), Query Frame = 0
Query:  126 IAHFGFPAEFHLI--NEEIGEI--IGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQGHV-QESKLGK 263
            +A+F  P EF L+  N++I E         PQ+F+ V SLD+  R+R EGYGY+  P  +G H L ++TWRP  + +    R  FF+GG+  L DP Y + P + +G  LS+FGF+TE++G++++R+++ +Q  V  ES+  K
Sbjct:  352 VAYFCCPFEFDLLYHNDDITEDDKYVMPHWPQLFVEVLSLDSWQRYRTEGYGYIDFPNTSGTHELEIKTWRPQGNSLIDEMRR-FFIGGSPELEDPTYTAVPTTHEGEILSKFGFKTETTGSVKLRINILQQSQVFMESQTSK 493          
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Match: UPI00138F9F19 (Meckel syndrome type 1 protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138F9F19)

HSP 1 Score: 104 bits (259), Expect = 1.680e-20
Identity = 55/140 (39.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:  126 IAHFGFPAEFHLINEEIGEIIGTGERPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICS-PIFRCHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHLAEQGHV-QESKLGK 263
            +AHF FP E+ L+ +         + P +F+ V SLD+  RHR EGYGY  +P + G+H +++ TWRPI + P+    R  FF+GG+  L DP Y  +P + +   LS+F FRT +SG++ +RL++ +Q     ESK  K
Sbjct:  378 VAHFCFPFEYSLVYDARHSPDAFVKWPLLFVEVMSLDSWERHRTEGYGYTVIPNKAGSHEIVINTWRPIGNGPVPELRR--FFIGGSPELEDPTYPQQPVATEEKVLSKFYFRTATSGSVTIRLNVVQQCQAFMESKKSK 515          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47123.11814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG4_ECTSI1.180e-8858.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000719CB835.880e-2444.29Meckel syndrome type 1 protein-like n=1 Tax=Priapu... [more]
UPI001455BB239.570e-2441.33Meckel syndrome type 1 protein-like n=1 Tax=Asteri... [more]
A0A8B7Y382_ACAPL3.530e-2241.55Meckel syndrome type 1 protein-like isoform X1 n=4... [more]
UPI00109BA2723.000e-2141.38Meckel syndrome type 1 protein n=1 Tax=Exaiptasia ... [more]
A0A7S2BNE2_9STRA5.740e-2140.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A7SA52_NEMVE7.330e-2139.29Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A821X6W9_9NEOB1.070e-2041.09(mimic poison frog) hypothetical protein (Fragment... [more]
UPI0003F0D2F61.530e-2039.16Meckel syndrome type 1 protein homolog n=1 Tax=Sac... [more]
UPI00138F9F191.680e-2039.29Meckel syndrome type 1 protein n=1 Tax=Nematostell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 395..415
NoneNo IPR availablePANTHERPTHR12968:SF4MECKEL SYNDROME TYPE 1 PROTEINcoord: 125..334
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
IPR010796B9 domainPFAMPF07162B9-C2coord: 127..250
e-value: 3.6E-24
score: 85.9
IPR010796B9 domainPANTHERPTHR12968ENDOTHELIAL PROTEIN B9-RELATEDcoord: 125..334
IPR010796B9 domainPROSITEPS51381B9coord: 56..196
score: 10.228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47123contigH-elongata_contig47123:2072..4174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47123.11814.1mRNA_H-elongata_contig47123.11814.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47123 2072..4174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47123.11814.1 ID=prot_H-elongata_contig47123.11814.1|Name=mRNA_H-elongata_contig47123.11814.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=417bp
SKVASQAYPVVLPAHCQASGTINYSKGIGGIDWGTSAAVASSSATHTNAG
CGVAKISSMFHAPSTQAVGGLSQRVVSYTLLCLLALLWVQDASCVYWTAF
AAAVVVLMTLGGGAGGGEACEGLVPIAHFGFPAEFHLINEEIGEIIGTGE
RPQIFLAVSSLDNLARHRVEGYGYLTLPRQNGAHNLLVRTWRPICSPIFR
CHRLDFFVGGAHRLTDPRYASKPDSFKGSFLSRFGFRTESSGTLRVRLHL
AEQGHVQESKLGKSCGTGAVPGGPNIDLAGTRTVKEILRAVHTKRMSAEV
GRRLSTTTADPLSPAAAARSTAPAAVATIATAKATTPNSEVPETDRAVIS
RPKTTRERSIEGGKEIFEARIDRQAHAVTRVGSRDLSKHRDGEKVEAVVE
LLARVRSQLQQSEQRTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010796B9_dom