prot_H-elongata_contig4707.11807.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 218 bits (556), Expect = 5.230e-67 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG A +S++VF DADYASKA DRRSVSGG +MCGG C+ WFS TQK VTLST+EAEYV+L D +K++LFLRQVWRFMLP+ G+ C PVFEDNQGA+QL+QNP+SNSNSKHIDV HH RELV +++IS+ HV S YQHAD L K
Sbjct: 276 RGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 420
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE) HSP 1 Score: 209 bits (532), Expect = 8.060e-67 Identity = 97/145 (66.90%), Postives = 117/145 (80.69%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG +S+QVF DADYASKA DRRSVSGG +MCGG CV WFS TQK VTLST+EAEYVA+ D +K++LFLRQVWRFMLPD G+ C PVFEDN +Q++ NP++NSNSKHIDV HH RELV +++IS+ HV+SE+QH D L K
Sbjct: 7 RGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTK 151
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.970e-66 Identity = 99/145 (68.28%), Postives = 120/145 (82.76%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG +S+QVF DADYASKATDRRSVSGG +MCGG CV WFS TQK VTLST+EAEYVA+ D +K++LFLRQVWRFMLPD G+ C PVFEDNQGA+Q++ NP++NSNSKHIDV HH RELV +++IS+ +V + +QHAD L K
Sbjct: 159 RGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTK 303
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 216 bits (551), Expect = 2.940e-66 Identity = 100/145 (68.97%), Postives = 120/145 (82.76%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG +S+QVF DADYASKATDRRSVSGG +MCGG CV WFS TQK VTLST+EAEYVA+ D +K++LFLRQVWRFMLPD G+ C PVFEDNQGA+Q++ NP++NSNSKHIDV HH RELV +++IS+ HV + +QHAD L K
Sbjct: 276 RGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTK 420
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5KBD2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD2_9PHAE) HSP 1 Score: 213 bits (542), Expect = 2.960e-66 Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 0
Query: 3 GRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
G A +S++VFADADYASKA DRRSVSGG +MCGG C+ WFS TQK V LST+EAEY +L D +K++LFLRQVWRFMLP+ G+ C PVFEDNQGA+QL+QNP+SNSNSKHIDV HH RELV +++IS+ HV S YQHAD L K
Sbjct: 178 GVVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVKLSTTEAEYFSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 321
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 214 bits (545), Expect = 4.620e-66 Identity = 99/145 (68.28%), Postives = 119/145 (82.07%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG +S+QVF DADYASKATDRRSVSGG +MCGG CV WFS TQK VTLST+EAEYVA+ D +K++LFLRQVWRFMLPD + C PVFEDNQGA+Q+ NP++NSNSKHIDV HH RELV +++IS+ HV +++QHAD L K
Sbjct: 214 RGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTK 358
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5K7L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7L4_9PHAE) HSP 1 Score: 208 bits (529), Expect = 7.180e-66 Identity = 100/145 (68.97%), Postives = 115/145 (79.31%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG SLQ + DAD+ASKA DRRSVSGG + CGG V WFS TQK VTLST+EAEYV+LGDAVK++LFLRQ+WRFMLP G+ C P+FEDNQGA+QL+QNP+SNSNSKHIDV HH RELV ++ IS HV S YQ AD LPK
Sbjct: 42 RGTVEGFSLQGYTDADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVSLGDAVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKAISAIHVPSPYQRADFLPK 186
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.170e-65 Identity = 100/145 (68.97%), Postives = 120/145 (82.76%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG A +S++VFADADYASKA DRRSVSGG +MCGG C+ WFS TQK VTLST+EAEYV+L D +K++LFLRQV RF+LP+ G+ C PV EDNQGA+QL+QNP+SNS SKHIDV HH RELVR+++IS+ HV S YQHAD L K
Sbjct: 92 RGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTK 236
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.260e-65 Identity = 97/145 (66.90%), Postives = 118/145 (81.38%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELVRQRDISVNHVSSEYQHADILPK 146
RG +S+QVF DADY KA DRRSVSGG +MCGG CV WFS TQK VTLST+EAEYVA+ D +K++LFLRQVWRFMLPD G+ C PVFEDNQGA+Q++ NP++NSNSKHID HH R+LV +++IS+ HV+SE+QHAD L K
Sbjct: 131 RGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTK 275
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.370e-65 Identity = 101/146 (69.18%), Postives = 121/146 (82.88%), Query Frame = 0
Query: 2 RGRTASISLQVFADADYASKATDRRSVSGGAIMCGGACVCWFSTTQKYVTLSTSEAEYVALGDAVKKLLFLRQVWRFMLPDKGLRCFPVFEDNQGAVQLSQNPVSNSNSKHIDVCHHCFRELV-RQRDISVNHVSSEYQHADILPK 146
RG A +S++VFADADYASKA DRRSVSGG +MCGG C+ WFS TQK VTLST+EAEYV+L D +K++LFLRQVWRFMLP+ G+ C PVFEDNQGA+QL+QNP+SNSN KHIDV HH RELV +++IS+ HV S YQHAD L +
Sbjct: 175 RGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTR 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4707.11807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig4707.11807.1 ID=prot_H-elongata_contig4707.11807.1|Name=mRNA_H-elongata_contig4707.11807.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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