prot_H-elongata_contig47041.11800.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47041.11800.1
Unique Nameprot_H-elongata_contig47041.11800.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length584
Homology
BLAST of mRNA_H-elongata_contig47041.11800.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 9.040e-55
Identity = 245/643 (38.10%), Postives = 302/643 (46.97%), Query Frame = 0
Query:    1 RIEQLQAPDKQESIVKMVASTAPEQGKVPSWLRARAARFVRMQRYRFGERLRAQQRMVQAMGGKPHISHLVSRAMSAAAFLAVSGVELTLPWPDEFTKQVAVTPPCFLSPGPNVSDGSRGSDSSPRSLRPSSSARPSGPLLFHPQKKHEGSGGGMDRSPDQIPERMYTPSSEAAAGLTAAAVGVPGPQ----LAAEYEAQLELYRRRQEAGLSNGGMPSIPGDCRPLSPIQ----DEGGRGAHASPGSSSVEEMEIG--SSISSVSGGXXXXXXXXXXXXXXVSSPASPTSAAHF----------------------------------------------GIPALRAMSEAKRSEADANAAVGASQAKAKKEKKALEKARSDVRVASIRLTAARDRVAVALKEVKATANPVSFDAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASSATYGVTSAGSGSVCGSDVSLEICKGSKSCSGGGGR---KGCGRQSPAPITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTIEGRGGGGVDSGGEVDILESGGIDIGMSDTVRSSLKTKPLQGWGGDVEAELGPWEDVRPCCLCKNSGDAEKSGRLLPLDDGTWVHTHCGLWSSEV 584
            RIEQL+ PDKQ+ ++  +AST+ EQ KVP WLR RAARFVRMQRYR GER+RAQQR  +A+G +PHISHL+SR +SAAAFLAVSGVELTLPWPDE TKQ+A+ PP FL  G   S+    S +    L P+ + R  GPLL     + E        SP  + ER  +P+                      +  EYEAQLE++RRRQ  G   G M   PGDC PLSP          R A A    +    +  G  +  S+    XXXXXXXXXXXXXX+ SP S     H                                               G+P   ++  A+  EA A AA  A++A+++  +K L K                             A+ V   A +               XXXXXXXXXXXX                    SA  G   AG G +  +  SL   +G+   SGGGG    KG    +   I  XXXXXXXXXX                                  + ++L SG ID G  D     LKT PL+GWG +VE ELG W+DVR CCLCK +GD +K+GRLLPLDDG W+HT CGLWS EV
Sbjct: 1836 RIEQLRMPDKQDDVINRIASTSQEQAKVPYWLRTRAARFVRMQRYRLGERIRAQQRAHRAVGIQPHISHLMSRVLSAAAFLAVSGVELTLPWPDELTKQMALQPPHFLLEGGRKSE----SAADVEGLPPAPAPRTPGPLLGCAGSRKEALS-----SPTAV-ERQQSPTXXXXXXXXXXXXXXXXXXXXXXVDPEYEAQLEMFRRRQANG-GGGQMAHYPGDCPPLSPESHSPPSSPDRAADARHPQADHHRLSSGLPADSSAAXXXXXXXXXXXXXXXXXICSPPSYPRHQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTSSTGGVPL--SLPSAREVEAKAAAAAVAAEAQSRIARKDLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGVMAPAPLPGRRIAGHPRTGGGPXXXXXXXXXXXX--------------------SADVG---AGDG-LDSNSGSLGAPEGNSCSSGGGGSGSLKGAQELAATAIXXXXXXXXXXXXTAAR------------------------------DKEMLVSGVIDDGTLD----ELKTVPLRGWGKNVETELGRWQDVRACCLCKATGDGDKTGRLLPLDDGQWIHTLCGLWSREV 2407          
BLAST of mRNA_H-elongata_contig47041.11800.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 3.680e-44
Identity = 114/236 (48.31%), Postives = 145/236 (61.44%), Query Frame = 0
Query:    1 RIEQLQAPDKQESIVKMVASTAPEQGKVPSWLRARAARFVRMQRYRFGERLRAQQRMVQAMGGKPHISHLVSRAMSAAAFLAVSGVELTLPWPDEFTKQVAVTPPCFLSPGPNVSDGSRGSDSSP-RSLRPSSSARPSGPLLFHPQKKHEG----SGGGMDRSPDQIPERMYTPSSEAAAGLTAAAVGVPG------PQLAAEYEAQLELYRRRQEAGLSNGGMPSIPGDCRPLSP 225
            RIEQL+ PDKQ+ ++  +AST+ EQ KVP WLR RAARFVRMQRYR GER+RAQQR  +A+G +PHISHL+SR +SAAAFLAVSGVELTLPWPDE TKQ+A+ PP FL  G     G +G  ++  + L P+ + R  GPLL     + E     +     +SP  + ++      +                    P + +EYEAQLE++RRRQ  G   G M   PGDC PLSP
Sbjct: 2256 RIEQLRLPDKQDDVINRIASTSQEQSKVPYWLRTRAARFVRMQRYRLGERIRAQQRAHRAVGIQPHISHLMSRVLSAAAFLAVSGVELTLPWPDELTKQMALQPPHFLLEG-----GRKGESAADVKGLPPAPAPRTPGPLLGCAGLRKEALSCTTAVERQQSPTSVQQQCVQRHQQQLVQXXXXXXXXXXXXXXXQPHVDSEYEAQLEMFRRRQANG-GGGQMAHYPGDCPPLSP 2485          
BLAST of mRNA_H-elongata_contig47041.11800.1 vs. uniprot
Match: A0A7S4J1Z5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1Z5_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.040e-7
Identity = 32/81 (39.51%), Postives = 38/81 (46.91%), Query Frame = 0
Query:  528 PLQGWGGDVEA--ELGPWEDVRPCCLCKNSGDAEK----------------------SGRLLPLDDGTWVHTHCGLWSSEV 584
            PL GWG   ++  E  PW+D R CCLC   GD +                       +GRLLP+  G WVH  C LWSSEV
Sbjct: 1130 PLLGWGRIDKSLQETHPWKDPRSCCLCGGCGDDDAGVISGKSPDQTEGDDSGIQLAHAGRLLPMQQGLWVHAACALWSSEV 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47041.11800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHU3_ECTSI9.040e-5538.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG36_9PHAE3.680e-4448.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4J1Z5_9STRA6.040e-739.51Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 546..584
score: 12.472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47041contigH-elongata_contig47041:197..3814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47041.11800.1mRNA_H-elongata_contig47041.11800.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47041 197..3814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47041.11800.1 ID=prot_H-elongata_contig47041.11800.1|Name=mRNA_H-elongata_contig47041.11800.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=584bp
RIEQLQAPDKQESIVKMVASTAPEQGKVPSWLRARAARFVRMQRYRFGER
LRAQQRMVQAMGGKPHISHLVSRAMSAAAFLAVSGVELTLPWPDEFTKQV
AVTPPCFLSPGPNVSDGSRGSDSSPRSLRPSSSARPSGPLLFHPQKKHEG
SGGGMDRSPDQIPERMYTPSSEAAAGLTAAAVGVPGPQLAAEYEAQLELY
RRRQEAGLSNGGMPSIPGDCRPLSPIQDEGGRGAHASPGSSSVEEMEIGS
SISSVSGGVGGGVGGSASPSPSVSSPASPTSAAHFGIPALRAMSEAKRSE
ADANAAVGASQAKAKKEKKALEKARSDVRVASIRLTAARDRVAVALKEVK
ATANPVSFDAVVVAGGGGSNGGGSKATLTAKKKRRRKNPQDSAAAAAVAG
GAGAAALASSATYGVTSAGSGSVCGSDVSLEICKGSKSCSGGGGRKGCGR
QSPAPITGTAAAAAASGGNPFPCITSAGTSSSSSGAGCTIEGRGGGGVDS
GGEVDILESGGIDIGMSDTVRSSLKTKPLQGWGGDVEAELGPWEDVRPCC
LCKNSGDAEKSGRLLPLDDGTWVHTHCGLWSSEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034732EPHD